Cow genome map

Conread name: rpigcf0_003055.y1

Conread position: 1-445
Cow position: chr27:24999386-24999847 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 18

Conread position: 1-503
Cow position: chr27:8942342-8942856 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 18

Conread position: 1-544
Cow position: chr27:15925685-15925124 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 25

Conread position: 1-558
Cow position: chr27:13876076-13875501 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 26

Conread position: 4-313
Cow position: chr27:31371947-31372265 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 195, 23

Conread position: 5-438
Cow position: chr27:21350669-21351121 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 16

Conread position: 5-570
Cow position: chr27:10992713-10992129 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 14

Conread position: 7-474
Cow position: chr27:9169335-9169775 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 14

Conread position: 8-565
Cow position: chr27:16787174-16786592 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 24

Conread position: 18-395
Cow position: chr27:27141926-27141544 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 148

Conread position: 18-485
Cow position: chr27:4819377-4819860 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 331
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 103, 45

Conread position: 18-509
Cow position: chr27:27064109-27064610 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 96

Conread position: 18-558
Cow position: chr27:10306942-10307535 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 208

Conread position: 19-301
Cow position: chr27:6674568-6674276 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 85

Conread position: 19-327
Cow position: chr27:23452807-23452495 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 74

Conread position: 19-388
Cow position: chr27:23502794-23502439 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 106

Conread position: 19-397
Cow position: chr27:13182463-13182083 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 30

Conread position: 19-400
Cow position: chr27:2298745-2298345 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 236

Conread position: 19-410
Cow position: chr27:6523388-6522973 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 197

Conread position: 19-418
Cow position: chr27:11413048-11412648 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 55

Conread position: 19-451
Cow position: chr27:25380330-25379875 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 164

Conread position: 19-471
Cow position: chr27:30374223-30374701 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 19-475
Cow position: chr27:4385735-4386198 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 43

Conread position: 19-488
Cow position: chr27:19718252-19717767 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 19-505
Cow position: chr27:12246978-12246488 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 39

Conread position: 19-505
Cow position: chr27:29184522-29185003 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 313
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 109, 58

Conread position: 19-507
Cow position: chr27:22603495-22603017 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 99

Conread position: 19-508
Cow position: chr27:14670048-14670549 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 187

Conread position: 19-521
Cow position: chr27:17645865-17646347 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 161

Conread position: 19-521
Cow position: chr27:22418434-22418954 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 112

Conread position: 19-522
Cow position: chr27:24227460-24227987 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 188

Conread position: 19-556
Cow position: chr27:23632929-23632379 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 55

Conread position: 19-557
Cow position: chr27:299050-299605 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 188

Conread position: 19-557
Cow position: chr27:26427795-26428359 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 189

Conread position: 19-558
Cow position: chr27:11434998-11435559 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 79

Conread position: 19-558
Cow position: chr27:25809190-25809748 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 147

Conread position: 19-558
Cow position: chr27:28207125-28206572 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 24

Conread position: 19-582
Cow position: chr27:15454546-15453956 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 189

Conread position: 19-588
Cow position: chr27:20636743-20637319 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 154

Conread position: 19-589
Cow position: chr27:15867720-15867131 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 134

Conread position: 19-589
Cow position: chr27:17473155-17472553 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 67

Conread position: 19-603
Cow position: chr27:15866554-15865948 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 127

Conread position: 19-605
Cow position: chr27:1353928-1353307 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 160

Conread position: 20-474
Cow position: chr27:25783916-25783490 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 160, 65

Conread position: 21-299
Cow position: chr27:18922781-18922491 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 145

Conread position: 21-437
Cow position: chr27:28018664-28018239 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 22

Conread position: 21-505
Cow position: chr27:6074247-6073766 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 148

Conread position: 21-558
Cow position: chr27:8430096-8430652 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 368
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 215

Conread position: 22-393
Cow position: chr27:26397940-26398312 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 67

Conread position: 22-397
Cow position: chr27:25791142-25790746 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 193

Conread position: 22-412
Cow position: chr27:11255844-11255452 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 186

Conread position: 22-412
Cow position: chr27:13198235-13197832 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 162, 45

Conread position: 22-419
Cow position: chr27:23070033-23070440 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 103

Conread position: 22-425
Cow position: chr27:732893-732488 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 101

Conread position: 22-446
Cow position: chr27:9090471-9090898 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 185

Conread position: 22-475
Cow position: chr27:1058353-1058812 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 22-475
Cow position: chr27:15319780-15319323 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 153, 18

Conread position: 22-483
Cow position: chr27:27460260-27460715 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 308
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 207, 76

Conread position: 22-519
Cow position: chr27:26785652-26786169 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 117

Conread position: 22-519
Cow position: chr27:30583067-30582549 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 119

Conread position: 22-556
Cow position: chr27:13317635-13318207 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 108

Conread position: 22-558
Cow position: chr27:15315820-15315291 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 133

Conread position: 22-558
Cow position: chr27:17397124-17397683 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 113

Conread position: 22-558
Cow position: chr27:21393177-21393725 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 74

Conread position: 22-566
Cow position: chr27:22330330-22330898 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 383
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 72, 154

Conread position: 22-567
Cow position: chr27:26807236-26807789 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 372
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 51

Conread position: 22-584
Cow position: chr27:27019773-27020354 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 101

Conread position: 22-586
Cow position: chr27:24445826-24446397 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 185

Conread position: 23-508
Cow position: chr27:27683785-27684286 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 41

Conread position: 23-558
Cow position: chr27:8961940-8962473 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 184

Conread position: 24-496
Cow position: chr27:12277951-12278405 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 16

Conread position: 24-589
Cow position: chr27:22035049-22035636 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 67

Conread position: 25-476
Cow position: chr27:30868413-30868878 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 141

Conread position: 29-410
Cow position: chr27:16823133-16822765 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 153, 63

Conread position: 33-521
Cow position: chr27:30177251-30177732 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 30

Conread position: 34-558
Cow position: chr27:8062044-8062583 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 89

Conread position: 34-581
Cow position: chr27:18544316-18543733 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 173

Conread position: 38-488
Cow position: chr27:27038526-27038985 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 135

Conread position: 40-583
Cow position: chr27:28931476-28932059 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 41-574
Cow position: chr27:18558690-18558105 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 184

Conread position: 43-485
Cow position: chr27:29208105-29207661 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 124, 75

Conread position: 43-556
Cow position: chr27:23128763-23128235 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 82

Conread position: 46-489
Cow position: chr27:29831382-29831848 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 159

Conread position: 46-557
Cow position: chr27:1636641-1637157 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 42

Conread position: 53-464
Cow position: chr27:29977554-29977125 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 70

Conread position: 54-557
Cow position: chr27:26424291-26424807 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 94

Conread position: 54-558
Cow position: chr27:20283921-20283412 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 353
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 144, 35

Conread position: 57-408
Cow position: chr27:30362537-30362173 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 9

Conread position: 63-519
Cow position: chr27:26919624-26920103 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 88

Conread position: 64-508
Cow position: chr27:23882077-23882539 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 161

Conread position: 67-567
Cow position: chr27:28189932-28190432 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 214

Conread position: 68-558
Cow position: chr27:19589759-19589251 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 354
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 138

Conread position: 79-470
Cow position: chr27:21139098-21138699 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 12

Conread position: 80-517
Cow position: chr27:21668853-21669297 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 95

Conread position: 83-565
Cow position: chr27:31372711-31373211 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 55

Conread position: 86-594
Cow position: chr27:6550717-6550193 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 121

Conread position: 88-558
Cow position: chr27:2957668-2957185 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 91-476
Cow position: chr27:11273828-11273438 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 32

Conread position: 92-583
Cow position: chr27:15203971-15204494 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 115

Conread position: 93-591
Cow position: chr27:28921640-28922158 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 30

Conread position: 94-558
Cow position: chr27:24331987-24331482 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 116

Conread position: 96-599
Cow position: chr27:23930220-23929704 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 62

Conread position: 97-590
Cow position: chr27:18507887-18507377 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 105

Conread position: 97-602
Cow position: chr27:26508906-26509430 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 105

Conread position: 99-558
Cow position: chr27:12516450-12515962 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 29

Conread position: 101-571
Cow position: chr27:28518536-28518045 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 65

Conread position: 103-395
Cow position: chr27:31147424-31147727 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 104

Conread position: 103-506
Cow position: chr27:1290619-1291022 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 100

Conread position: 110-558
Cow position: chr27:10980106-10979628 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 110-583
Cow position: chr27:16284715-16284232 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 57

Conread position: 112-558
Cow position: chr27:6541865-6541403 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 70, 95

Conread position: 113-405
Cow position: chr27:14902410-14902719 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 47

Conread position: 113-413
Cow position: chr27:27259845-27259540 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 14

Conread position: 115-558
Cow position: chr27:6500302-6499826 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 92

Conread position: 118-584
Cow position: chr27:13006068-13005610 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 309
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 88

Conread position: 120-551
Cow position: chr27:7934931-7935383 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 127-468
Cow position: chr27:24321413-24321060 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 39

Conread position: 128-319
Cow position: chr27:2011879-2012083 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 78

Conread position: 128-400
Cow position: chr27:6058726-6058445 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 38

Conread position: 128-558
Cow position: chr27:13638768-13639219 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 79

Conread position: 128-563
Cow position: chr27:4390030-4390494 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 79

Conread position: 129-466
Cow position: chr27:8048516-8048862 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 75

Conread position: 129-558
Cow position: chr27:12596980-12596550 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 74

Conread position: 130-393
Cow position: chr27:1183654-1183938 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 75

Conread position: 130-470
Cow position: chr27:25998927-25998570 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 77

Conread position: 131-419
Cow position: chr27:8570821-8571120 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 69

Conread position: 131-558
Cow position: chr27:2592762-2592305 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 134-507
Cow position: chr27:30354127-30354511 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 134-556
Cow position: chr27:29038722-29039151 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 161

Conread position: 135-508
Cow position: chr27:22454560-22454946 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 76

Conread position: 135-558
Cow position: chr27:20354798-20354368 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 310
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 67

Conread position: 136-380
Cow position: chr27:19637850-19637600 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 93, 58

Conread position: 136-511
Cow position: chr27:18593484-18593105 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 137-476
Cow position: chr27:21452855-21453232 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 137-504
Cow position: chr27:27640777-27641182 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 29

Conread position: 137-508
Cow position: chr27:30765247-30764862 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 70

Conread position: 137-518
Cow position: chr27:26218910-26218522 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 13

Conread position: 137-557
Cow position: chr27:19661158-19660697 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 44

Conread position: 137-567
Cow position: chr27:19543694-19544142 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 70

Conread position: 138-556
Cow position: chr27:15668553-15669004 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 28

Conread position: 138-558
Cow position: chr27:23917843-23918266 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 285
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 26

Conread position: 139-368
Cow position: chr27:17926424-17926651 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 27

Conread position: 139-459
Cow position: chr27:707160-706832 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 27

Conread position: 141-508
Cow position: chr27:30359606-30359237 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 145-508
Cow position: chr27:25277342-25276974 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 146-372
Cow position: chr27:18215262-18215020 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 61

Conread position: 149-300
Cow position: chr27:26625329-26625165 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 59

Conread position: 149-564
Cow position: chr27:19685511-19685948 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 53

Conread position: 153-410
Cow position: chr27:21569644-21569911 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 54

Conread position: 154-581
Cow position: chr27:28001620-28002058 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 52

Conread position: 154-599
Cow position: chr27:30915200-30914732 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 155-381
Cow position: chr27:30843881-30844120 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 52

Conread position: 157-464
Cow position: chr27:22513488-22513803 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 72, 41

Conread position: 162-508
Cow position: chr27:30988980-30988622 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 163-488
Cow position: chr27:26151201-26150870 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 14

Conread position: 167-564
Cow position: chr27:23891115-23890694 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 32

Conread position: 171-560
Cow position: chr27:20046049-20045662 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 11

Conread position: 177-584
Cow position: chr27:7346828-7346411 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 22

Conread position: 182-371
Cow position: chr27:20592145-20591948 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 16

Conread position: 182-402
Cow position: chr27:27550586-27550797 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 16

Conread position: 182-488
Cow position: chr27:14937267-14937577 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 16

Conread position: 182-488
Cow position: chr27:20036967-20037262 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 16

Conread position: 182-508
Cow position: chr27:15643337-15643007 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 182-520
Cow position: chr27:19546341-19546693 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 16

Conread position: 182-554
Cow position: chr27:27554525-27554908 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 50, 8

Conread position: 182-555
Cow position: chr27:27438343-27438737 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 182-558
Cow position: chr27:4944367-4944738 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 16

Conread position: 182-558
Cow position: chr27:19668627-19669037 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 16

Conread position: 182-558
Cow position: chr27:30871898-30872289 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 182-562
Cow position: chr27:6160143-6159755 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 17

Conread position: 182-594
Cow position: chr27:19896918-19896508 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 16

Conread position: 182-595
Cow position: chr27:27003120-27003529 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 282
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 16

Conread position: 183-393
Cow position: chr27:22268665-22268447 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 15

Conread position: 183-483
Cow position: chr27:27270377-27270687 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 134

Conread position: 183-567
Cow position: chr27:16705407-16705012 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 183-568
Cow position: chr27:3306936-3306544 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 15, 184

Conread position: 185-372
Cow position: chr27:20118559-20118373 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 13

Conread position: 189-556
Cow position: chr27:22614989-22614625 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 9

Conread position: 193-410
Cow position: chr27:7537920-7538148 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 215

Conread position: 193-519
Cow position: chr27:23545177-23545515 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 32

Conread position: 194-615
Cow position: chr27:14343317-14343717 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 306
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 38, 21

Conread position: 196-407
Cow position: chr27:26135281-26135069 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 29

Conread position: 196-455
Cow position: chr27:20247655-20247921 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 167

Conread position: 196-583
Cow position: chr27:4858501-4858875 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 32, 14

Conread position: 197-484
Cow position: chr27:28467291-28467596 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 35, 138

Conread position: 197-557
Cow position: chr27:26489754-26490136 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 80

Conread position: 198-393
Cow position: chr27:4011820-4011625 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 25

Conread position: 198-558
Cow position: chr27:7649436-7649823 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 121

Conread position: 200-556
Cow position: chr27:29816477-29816859 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 81

Conread position: 201-589
Cow position: chr27:26481074-26481463 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 58, 22

Conread position: 205-416
Cow position: chr27:6350698-6350917 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 23

Conread position: 217-521
Cow position: chr27:30260769-30261085 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 52

Conread position: 221-392
Cow position: chr27:10395134-10395312 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 50

Conread position: 221-506
Cow position: chr27:24371354-24371079 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 8

Conread position: 221-583
Cow position: chr27:8168302-8168680 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 8, 56

Conread position: 223-595
Cow position: chr27:26226173-26226558 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 19, 5

Conread position: 228-412
Cow position: chr27:26979595-26979785 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 41

Conread position: 228-558
Cow position: chr27:16275555-16275912 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 43

Conread position: 229-466
Cow position: chr27:30672449-30672686 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 43

Conread position: 238-508
Cow position: chr27:31148862-31148588 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 30

Conread position: 241-475
Cow position: chr27:22559723-22559960 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 178

Conread position: 241-485
Cow position: chr27:8263236-8263484 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 243-405
Cow position: chr27:20570218-20570053 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 113

Conread position: 243-412
Cow position: chr27:26141868-26141697 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 30

Conread position: 243-488
Cow position: chr27:20497310-20497058 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 239

Conread position: 243-520
Cow position: chr27:24940006-24939706 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 243-584
Cow position: chr27:22386966-22386629 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 25

Conread position: 244-392
Cow position: chr27:4482762-4482909 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 74

Conread position: 248-558
Cow position: chr27:15865697-15865378 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 59, 18

Conread position: 248-558
Cow position: chr27:16965665-16965343 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 42, 26

Conread position: 249-464
Cow position: chr27:20078957-20078742 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 118

Conread position: 249-556
Cow position: chr27:26188912-26188597 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 115, 19

Conread position: 249-558
Cow position: chr27:23594406-23594087 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 19

Conread position: 250-488
Cow position: chr27:20901651-20901413 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 40, 64

Conread position: 251-558
Cow position: chr27:7615000-7615301 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 17

Conread position: 253-458
Cow position: chr27:20055881-20056091 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 100

Conread position: 259-471
Cow position: chr27:26347538-26347745 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 35

Conread position: 260-410
Cow position: chr27:18491927-18491769 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 8

Conread position: 260-469
Cow position: chr27:21976128-21975922 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 24

Conread position: 260-552
Cow position: chr27:29380938-29380635 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 157

Conread position: 261-555
Cow position: chr27:31151455-31151155 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 23

Conread position: 261-558
Cow position: chr27:28896957-28896646 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 18

Conread position: 264-483
Cow position: chr27:22489355-22489132 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 81

Conread position: 265-584
Cow position: chr27:16088885-16088533 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 265-594
Cow position: chr27:20748932-20749271 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 10

Conread position: 268-508
Cow position: chr27:15215306-15215059 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 124

Conread position: 268-599
Cow position: chr27:6925162-6924814 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 320

Conread position: 272-563
Cow position: chr27:22225526-22225806 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 73

Conread position: 272-579
Cow position: chr27:26013305-26013614 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 108

Conread position: 273-558
Cow position: chr27:26111841-26112150 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 273-627
Cow position: chr27:20514889-20514527 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 80

Conread position: 275-475
Cow position: chr27:31017768-31017962 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 75

Conread position: 275-522
Cow position: chr27:7974240-7973983 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 89

Conread position: 276-467
Cow position: chr27:4156067-4155867 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 276-582
Cow position: chr27:29593568-29593885 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 17

Conread position: 279-521
Cow position: chr27:28260477-28260724 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 72

Conread position: 286-586
Cow position: chr27:20812959-20812664 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 23

Conread position: 289-576
Cow position: chr27:27558450-27558755 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 12

Conread position: 289-589
Cow position: chr27:23860220-23859900 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 121

Conread position: 293-589
Cow position: chr27:25152128-25151828 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 58

Conread position: 294-508
Cow position: chr27:22423554-22423347 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 56

Conread position: 298-498
Cow position: chr27:62702-62499 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 11

Conread position: 298-508
Cow position: chr27:17918273-17918483 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 54

Conread position: 300-584
Cow position: chr27:18882695-18882399 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 30

Conread position: 305-483
Cow position: chr27:10653719-10653540 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 36

Conread position: 305-557
Cow position: chr27:29841699-29841951 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 19

Conread position: 310-489
Cow position: chr27:15343252-15343423 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 310-558
Cow position: chr27:14269314-14269562 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 13

Conread position: 311-447
Cow position: chr27:30829672-30829535 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 39

Conread position: 315-557
Cow position: chr27:11993842-11994098 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 8

Conread position: 316-558
Cow position: chr27:11982624-11982880 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 39

Conread position: 318-483
Cow position: chr27:20803637-20803804 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 318-508
Cow position: chr27:18922811-18923002 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 6

Conread position: 318-560
Cow position: chr27:212983-212717 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 6

Conread position: 318-563
Cow position: chr27:12459305-12459051 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 28

Conread position: 319-454
Cow position: chr27:28472802-28472664 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 84

Conread position: 319-558
Cow position: chr27:26793769-26794016 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 17

Conread position: 319-571
Cow position: chr27:14303753-14303500 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 86, 28

Conread position: 319-608
Cow position: chr27:11561795-11561498 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 94, 34

Conread position: 323-557
Cow position: chr27:15825709-15825948 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 28

Conread position: 323-558
Cow position: chr27:19509030-19508780 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 222

Conread position: 323-583
Cow position: chr27:5553486-5553215 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 207

Conread position: 323-595
Cow position: chr27:23560015-23560294 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 90, 247

Conread position: 324-557
Cow position: chr27:19933079-19932835 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 69

Conread position: 325-508
Cow position: chr27:1789123-1789312 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 67

Conread position: 325-508
Cow position: chr27:20584444-20584631 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 25

Conread position: 325-588
Cow position: chr27:26437105-26437381 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 255

Conread position: 326-521
Cow position: chr27:28478594-28478394 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 175

Conread position: 329-556
Cow position: chr27:10323846-10323614 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 136, 29

Conread position: 333-563
Cow position: chr27:22245631-22245404 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 17

Conread position: 338-558
Cow position: chr27:9977692-9977454 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 219

Conread position: 342-457
Cow position: chr27:30483300-30483416 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 342-554
Cow position: chr27:13940558-13940778 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 201

Conread position: 350-556
Cow position: chr27:6319908-6319693 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 351-558
Cow position: chr27:18435146-18435362 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 8

Conread position: 351-558
Cow position: chr27:31386641-31386862 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 352-508
Cow position: chr27:30489423-30489586 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 352-556
Cow position: chr27:8790754-8790972 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 352-556
Cow position: chr27:16512184-16512397 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 352-556
Cow position: chr27:30455981-30455763 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 171

Conread position: 354-558
Cow position: chr27:10598974-10598755 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 354-589
Cow position: chr27:29319396-29319142 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 355-595
Cow position: chr27:24303930-24303675 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 25

Conread position: 355-606
Cow position: chr27:27740307-27740574 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 96

Conread position: 356-558
Cow position: chr27:26121743-26121526 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 356-595
Cow position: chr27:10404133-10404384 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 55

Conread position: 356-621
Cow position: chr27:23148149-23147870 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 248

Conread position: 357-488
Cow position: chr27:29388653-29388523 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 6

Conread position: 359-508
Cow position: chr27:30908652-30908504 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 85

Conread position: 360-508
Cow position: chr27:14957750-14957899 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 361-588
Cow position: chr27:6241214-6241454 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 203

Conread position: 362-584
Cow position: chr27:15332318-15332539 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 119

Conread position: 371-558
Cow position: chr27:4411743-4411923 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 372-557
Cow position: chr27:6162443-6162634 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 376-567
Cow position: chr27:27648354-27648556 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 376-571
Cow position: chr27:19557348-19557146 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 108, 38

Conread position: 376-592
Cow position: chr27:19452965-19452737 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 37, 202

Conread position: 381-555
Cow position: chr27:26400763-26400946 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 135

Conread position: 384-556
Cow position: chr27:4413863-4414046 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 384-572
Cow position: chr27:5539740-5539938 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 56

Conread position: 387-596
Cow position: chr27:28015783-28016009 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 26

Conread position: 388-558
Cow position: chr27:22792783-22792607 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 114

Conread position: 393-576
Cow position: chr27:20048580-20048387 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 396-557
Cow position: chr27:26909648-26909819 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 396-587
Cow position: chr27:31498725-31498524 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 16

Conread position: 397-558
Cow position: chr27:11208612-11208789 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 412-558
Cow position: chr27:30444754-30444906 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.