Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_003055.y1
        

               Conread position:
               1-428
               

               Cow position:
               chr5:54714110-54713660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               5-244
               

               Cow position:
               chr5:46653541-46653783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               171, 14
               

               Conread position:
               8-529
               

               Cow position:
               chr5:16206502-16205973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 11
               

               Conread position:
               13-474
               

               Cow position:
               chr5:66257291-66257754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 14
               

               Conread position:
               14-502
               

               Cow position:
               chr5:64759091-64758623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 17
               

               Conread position:
               17-483
               

               Cow position:
               chr5:53855350-53855833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               17-556
               

               Cow position:
               chr5:55756790-55756200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               18-507
               

               Cow position:
               chr5:39447887-39447383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 193
               

               Conread position:
               19-246
               

               Cow position:
               chr5:46130130-46129897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               164, 24
               

               Conread position:
               19-270
               

               Cow position:
               chr5:46023528-46023266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 24
               

               Conread position:
               19-394
               

               Cow position:
               chr5:58004894-58005283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 63
               

               Conread position:
               19-405
               

               Cow position:
               chr5:26790795-26790407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 104
               

               Conread position:
               19-406
               

               Cow position:
               chr5:34115297-34115702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 175
               

               Conread position:
               19-406
               

               Cow position:
               chr5:60447894-60448265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 12
               

               Conread position:
               19-438
               

               Cow position:
               chr5:40357238-40356764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 208
               

               Conread position:
               19-454
               

               Cow position:
               chr5:16508741-16509204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               19-455
               

               Cow position:
               chr5:23140929-23140490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               19-473
               

               Cow position:
               chr5:44994396-44993932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 113
               

               Conread position:
               19-475
               

               Cow position:
               chr5:15478758-15479244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               19-475
               

               Cow position:
               chr5:34442144-34441661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 189
               

               Conread position:
               19-475
               

               Cow position:
               chr5:41981051-41981487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 16
               

               Conread position:
               19-483
               

               Cow position:
               chr5:43457859-43457404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               19-488
               

               Cow position:
               chr5:4218532-4218987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               19-503
               

               Cow position:
               chr5:6044935-6045441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 189
               

               Conread position:
               19-503
               

               Cow position:
               chr5:58855753-58856247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               19-508
               

               Cow position:
               chr5:52165530-52165021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 104
               

               Conread position:
               19-521
               

               Cow position:
               chr5:35826250-35826770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               363
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               163, 55
               

               Conread position:
               19-524
               

               Cow position:
               chr5:66366182-66366685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               19-536
               

               Cow position:
               chr5:53841933-53842475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               98, 84
               

               Conread position:
               19-555
               

               Cow position:
               chr5:26096946-26097502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 146
               

               Conread position:
               19-558
               

               Cow position:
               chr5:14550938-14550367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 275
               

               Conread position:
               19-558
               

               Cow position:
               chr5:17027747-17028291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 184
               

               Conread position:
               19-558
               

               Cow position:
               chr5:18573819-18574397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 188
               

               Conread position:
               19-558
               

               Cow position:
               chr5:21828505-21829079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 196
               

               Conread position:
               19-558
               

               Cow position:
               chr5:26467271-26467842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 110
               

               Conread position:
               19-558
               

               Cow position:
               chr5:29903873-29903328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 187
               

               Conread position:
               19-558
               

               Cow position:
               chr5:30302547-30303096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 185
               

               Conread position:
               19-558
               

               Cow position:
               chr5:32394261-32394817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               19-558
               

               Cow position:
               chr5:47756417-47756987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 379
               

               Conread position:
               19-558
               

               Cow position:
               chr5:47871402-47870839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 121
               

               Conread position:
               19-558
               

               Cow position:
               chr5:58748418-58748963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               359
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 64
               

               Conread position:
               19-558
               

               Cow position:
               chr5:62172055-62172613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 200
               

               Conread position:
               19-560
               

               Cow position:
               chr5:55233119-55232606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 64
               

               Conread position:
               19-567
               

               Cow position:
               chr5:67932815-67932242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 150
               

               Conread position:
               19-569
               

               Cow position:
               chr5:47889066-47888499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 189
               

               Conread position:
               19-576
               

               Cow position:
               chr5:72564408-72564973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 78
               

               Conread position:
               19-581
               

               Cow position:
               chr5:47317319-47316737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               592
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 186
               

               Conread position:
               19-587
               

               Cow position:
               chr5:60210490-60209902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 132
               

               Conread position:
               19-588
               

               Cow position:
               chr5:16894120-16893532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 106
               

               Conread position:
               19-591
               

               Cow position:
               chr5:15363542-15364116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 103
               

               Conread position:
               19-611
               

               Cow position:
               chr5:29827702-29828317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 218
               

               Conread position:
               20-413
               

               Cow position:
               chr5:41523140-41522747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 103
               

               Conread position:
               20-464
               

               Cow position:
               chr5:28247827-28248281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 20
               

               Conread position:
               20-470
               

               Cow position:
               chr5:35209822-35209363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               21-407
               

               Cow position:
               chr5:7140433-7140056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               21-469
               

               Cow position:
               chr5:28927946-28927481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 190
               

               Conread position:
               21-478
               

               Cow position:
               chr5:32697146-32696701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 101
               

               Conread position:
               21-556
               

               Cow position:
               chr5:66815930-66815378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 191
               

               Conread position:
               21-583
               

               Cow position:
               chr5:47601462-47602048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               598
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 151
               

               Conread position:
               22-243
               

               Cow position:
               chr5:60015574-60015801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               139, 25
               

               Conread position:
               22-276
               

               Cow position:
               chr5:63967989-63967728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               160, 72
               

               Conread position:
               22-390
               

               Cow position:
               chr5:6130008-6130387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               155, 261
               

               Conread position:
               22-399
               

               Cow position:
               chr5:16184744-16185133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 101
               

               Conread position:
               22-419
               

               Cow position:
               chr5:54405242-54404827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 112
               

               Conread position:
               22-423
               

               Cow position:
               chr5:2500541-2500112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 189
               

               Conread position:
               22-428
               

               Cow position:
               chr5:32378524-32378915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 135
               

               Conread position:
               22-444
               

               Cow position:
               chr5:41951429-41951008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 100
               

               Conread position:
               22-445
               

               Cow position:
               chr5:72172687-72173116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               160, 112
               

               Conread position:
               22-465
               

               Cow position:
               chr5:21524816-21525269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               22-475
               

               Cow position:
               chr5:58793962-58793488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 61
               

               Conread position:
               22-476
               

               Cow position:
               chr5:34463932-34463460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               22-478
               

               Cow position:
               chr5:45940961-45940488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               103, 165
               

               Conread position:
               22-484
               

               Cow position:
               chr5:67212033-67212489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 105
               

               Conread position:
               22-488
               

               Cow position:
               chr5:21040322-21039853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               22-489
               

               Cow position:
               chr5:19813568-19813089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 191
               

               Conread position:
               22-508
               

               Cow position:
               chr5:4710492-4710002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               22-508
               

               Cow position:
               chr5:44752661-44752155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               22-508
               

               Cow position:
               chr5:46510216-46509714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 186
               

               Conread position:
               22-509
               

               Cow position:
               chr5:39258206-39258657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 75
               

               Conread position:
               22-521
               

               Cow position:
               chr5:24348773-24349267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 58
               

               Conread position:
               22-546
               

               Cow position:
               chr5:37377520-37378042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 192
               

               Conread position:
               22-557
               

               Cow position:
               chr5:6528333-6528878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 18
               

               Conread position:
               22-558
               

               Cow position:
               chr5:14904404-14903851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 103
               

               Conread position:
               22-558
               

               Cow position:
               chr5:44848358-44847812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 45
               

               Conread position:
               22-558
               

               Cow position:
               chr5:64524229-64523649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               22-570
               

               Cow position:
               chr5:37645717-37646302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 193
               

               Conread position:
               22-571
               

               Cow position:
               chr5:72045994-72045448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 190
               

               Conread position:
               22-580
               

               Cow position:
               chr5:30486903-30487464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 101
               

               Conread position:
               22-587
               

               Cow position:
               chr5:35207913-35208507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 116
               

               Conread position:
               22-591
               

               Cow position:
               chr5:55176544-55177129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 115
               

               Conread position:
               22-618
               

               Cow position:
               chr5:56467357-56467947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 51
               

               Conread position:
               22-619
               

               Cow position:
               chr5:35145002-35145621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               644
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 187
               

               Conread position:
               23-409
               

               Cow position:
               chr5:24485757-24485382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 100
               

               Conread position:
               23-410
               

               Cow position:
               chr5:27403588-27403176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 96
               

               Conread position:
               23-472
               

               Cow position:
               chr5:31480805-31481264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 186
               

               Conread position:
               23-521
               

               Cow position:
               chr5:62107837-62107311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               23-548
               

               Cow position:
               chr5:56523827-56524367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 143
               

               Conread position:
               23-558
               

               Cow position:
               chr5:57935460-57934905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               565
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 105
               

               Conread position:
               24-488
               

               Cow position:
               chr5:34528219-34528673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               24-557
               

               Cow position:
               chr5:42845946-42845383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 182
               

               Conread position:
               27-474
               

               Cow position:
               chr5:52645423-52644962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 184
               

               Conread position:
               29-558
               

               Cow position:
               chr5:2309921-2309343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 194
               

               Conread position:
               30-587
               

               Cow position:
               chr5:3242805-3242251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 124
               

               Conread position:
               33-395
               

               Cow position:
               chr5:20344832-20345202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 142
               

               Conread position:
               33-557
               

               Cow position:
               chr5:45846030-45845476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 109
               

               Conread position:
               34-558
               

               Cow position:
               chr5:28946390-28945865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               35-471
               

               Cow position:
               chr5:41392410-41392847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 145
               

               Conread position:
               36-521
               

               Cow position:
               chr5:26094504-26093991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 124
               

               Conread position:
               36-593
               

               Cow position:
               chr5:39936769-39937363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 133
               

               Conread position:
               37-521
               

               Cow position:
               chr5:45226162-45225647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 148
               

               Conread position:
               37-558
               

               Cow position:
               chr5:43858761-43858203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 143
               

               Conread position:
               38-507
               

               Cow position:
               chr5:61725639-61726116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 59
               

               Conread position:
               40-589
               

               Cow position:
               chr5:44797045-44796490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               41-508
               

               Cow position:
               chr5:54310994-54311488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 175
               

               Conread position:
               43-308
               

               Cow position:
               chr5:34915814-34916089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               46-372
               

               Cow position:
               chr5:42747838-42748173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 57
               

               Conread position:
               51-571
               

               Cow position:
               chr5:24175052-24175579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               53-558
               

               Cow position:
               chr5:50722730-50723263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 130
               

               Conread position:
               54-508
               

               Cow position:
               chr5:60715671-60715216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               54-558
               

               Cow position:
               chr5:54875993-54875478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               59-556
               

               Cow position:
               chr5:28224144-28224655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 107
               

               Conread position:
               63-507
               

               Cow position:
               chr5:5111384-5110926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               63-522
               

               Cow position:
               chr5:65752552-65753033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 83
               

               Conread position:
               64-472
               

               Cow position:
               chr5:3281525-3281951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 144
               

               Conread position:
               67-516
               

               Cow position:
               chr5:6504169-6503711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               69-557
               

               Cow position:
               chr5:59225-58716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 34
               

               Conread position:
               70-281
               

               Cow position:
               chr5:19751558-19751767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               70-508
               

               Cow position:
               chr5:31640129-31640575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               71-418
               

               Cow position:
               chr5:1766642-1766288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               73-565
               

               Cow position:
               chr5:3491912-3492407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               80-563
               

               Cow position:
               chr5:72035375-72034879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               338
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 127
               

               Conread position:
               83-425
               

               Cow position:
               chr5:72287206-72286846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 94
               

               Conread position:
               83-508
               

               Cow position:
               chr5:9090307-9089872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 36
               

               Conread position:
               84-382
               

               Cow position:
               chr5:50950267-50950579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               88-488
               

               Cow position:
               chr5:63987729-63987316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 119
               

               Conread position:
               88-556
               

               Cow position:
               chr5:17999778-17999283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 120
               

               Conread position:
               89-558
               

               Cow position:
               chr5:27420002-27419533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 67
               

               Conread position:
               94-475
               

               Cow position:
               chr5:75437185-75436768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 125
               

               Conread position:
               96-595
               

               Cow position:
               chr5:1247001-1247512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               101-555
               

               Cow position:
               chr5:20779650-20779187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               103-429
               

               Cow position:
               chr5:42676970-42677305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               103-585
               

               Cow position:
               chr5:42063936-42064453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               108-428
               

               Cow position:
               chr5:58229441-58229768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               110-506
               

               Cow position:
               chr5:67243663-67244068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               112-409
               

               Cow position:
               chr5:65924959-65924638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 105
               

               Conread position:
               112-556
               

               Cow position:
               chr5:59873663-59873204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               113-419
               

               Cow position:
               chr5:49362244-49361930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               113-582
               

               Cow position:
               chr5:19278950-19278464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               116-390
               

               Cow position:
               chr5:50975633-50975935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               119-459
               

               Cow position:
               chr5:4617124-4617469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               119-483
               

               Cow position:
               chr5:59326079-59325715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               120-558
               

               Cow position:
               chr5:28302990-28302541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               121-475
               

               Cow position:
               chr5:65588463-65588818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               63, 81
               

               Conread position:
               122-488
               

               Cow position:
               chr5:13536909-13537262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               123-503
               

               Cow position:
               chr5:46323059-46322658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               124-474
               

               Cow position:
               chr5:32956336-32955979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               124-555
               

               Cow position:
               chr5:29353376-29352920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               128-488
               

               Cow position:
               chr5:51999977-52000348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               128-508
               

               Cow position:
               chr5:26477235-26476862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               128-508
               

               Cow position:
               chr5:43929976-43929586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               128-521
               

               Cow position:
               chr5:54350603-54350198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               128-558
               

               Cow position:
               chr5:40109259-40109699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               128-593
               

               Cow position:
               chr5:58144848-58144356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               129-488
               

               Cow position:
               chr5:28229916-28230294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               129-556
               

               Cow position:
               chr5:72903465-72903027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               130-565
               

               Cow position:
               chr5:32975791-32975336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               131-495
               

               Cow position:
               chr5:43738187-43737821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               131-558
               

               Cow position:
               chr5:11668417-11667969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               131-558
               

               Cow position:
               chr5:30844873-30845321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               132-512
               

               Cow position:
               chr5:74858335-74858731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 75
               

               Conread position:
               134-419
               

               Cow position:
               chr5:54064543-54064844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               48, 196
               

               Conread position:
               134-519
               

               Cow position:
               chr5:37646788-37646377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 74
               

               Conread position:
               135-507
               

               Cow position:
               chr5:54086305-54086687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 68
               

               Conread position:
               135-602
               

               Cow position:
               chr5:16938243-16937776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               338
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               136-521
               

               Cow position:
               chr5:6683582-6683204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               137-387
               

               Cow position:
               chr5:56135202-56134934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               137-392
               

               Cow position:
               chr5:45036787-45037049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               137-455
               

               Cow position:
               chr5:73079979-73080304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               137-464
               

               Cow position:
               chr5:31918420-31918750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 71
               

               Conread position:
               137-483
               

               Cow position:
               chr5:15426295-15426665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               137-488
               

               Cow position:
               chr5:34300692-34301046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               137-488
               

               Cow position:
               chr5:43992092-43992454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               137-507
               

               Cow position:
               chr5:4032222-4031835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               137-541
               

               Cow position:
               chr5:36854979-36855393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               137-569
               

               Cow position:
               chr5:17063327-17062853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               137-583
               

               Cow position:
               chr5:41164855-41165322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               138-425
               

               Cow position:
               chr5:21964059-21964358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               138-558
               

               Cow position:
               chr5:20127822-20128269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               139-412
               

               Cow position:
               chr5:12709655-12709944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               139-569
               

               Cow position:
               chr5:7723441-7723870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               140-500
               

               Cow position:
               chr5:49685511-49685127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               140-554
               

               Cow position:
               chr5:3771616-3772053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               140-556
               

               Cow position:
               chr5:30253515-30253953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               140-558
               

               Cow position:
               chr5:57074565-57074122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               140-609
               

               Cow position:
               chr5:36868515-36869003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               141-400
               

               Cow position:
               chr5:71504899-71505171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               142-560
               

               Cow position:
               chr5:71454824-71454414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               143-428
               

               Cow position:
               chr5:56820487-56820189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               144-410
               

               Cow position:
               chr5:18090501-18090791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               145-507
               

               Cow position:
               chr5:27306093-27306454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               145-591
               

               Cow position:
               chr5:5257522-5257052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               146-499
               

               Cow position:
               chr5:27411614-27411260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 137
               

               Conread position:
               147-521
               

               Cow position:
               chr5:15722277-15721913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               147-557
               

               Cow position:
               chr5:48757721-48758135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               149-599
               

               Cow position:
               chr5:16025682-16025230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               331
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 136
               

               Conread position:
               152-488
               

               Cow position:
               chr5:62142452-62142806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               155-556
               

               Cow position:
               chr5:8024407-8024002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               157-558
               

               Cow position:
               chr5:1688322-1687901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               158-472
               

               Cow position:
               chr5:55928740-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               160-393
               

               Cow position:
               chr5:43395348-43395113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               160-459
               

               Cow position:
               chr5:40039973-40039663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               164-415
               

               Cow position:
               chr5:3668700-3668957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               167-488
               

               Cow position:
               chr5:37808858-37808533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 13
               

               Conread position:
               174-474
               

               Cow position:
               chr5:47323262-47323580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               179-598
               

               Cow position:
               chr5:50943336-50942904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               314
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               180-558
               

               Cow position:
               chr5:34624787-34625163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               180-596
               

               Cow position:
               chr5:4280282-4280697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               182-393
               

               Cow position:
               chr5:17644835-17644618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-410
               

               Cow position:
               chr5:35235888-35235656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-428
               

               Cow position:
               chr5:28456590-28456333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-428
               

               Cow position:
               chr5:28459892-28459634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-475
               

               Cow position:
               chr5:9390356-9390676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-505
               

               Cow position:
               chr5:4220801-4221126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-508
               

               Cow position:
               chr5:57575586-57575925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               182-518
               

               Cow position:
               chr5:458302-458651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               182-557
               

               Cow position:
               chr5:5855700-5856074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 16
               

               Conread position:
               182-557
               

               Cow position:
               chr5:22643397-22643033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               182-558
               

               Cow position:
               chr5:26262853-26262470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-558
               

               Cow position:
               chr5:29061104-29060724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               182-558
               

               Cow position:
               chr5:51053827-51053433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               182-560
               

               Cow position:
               chr5:58320641-58320273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               182-625
               

               Cow position:
               chr5:35969363-35969817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               183-557
               

               Cow position:
               chr5:34561830-34562223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               183-558
               

               Cow position:
               chr5:18898805-18899171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               184-521
               

               Cow position:
               chr5:6286604-6286276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               185-508
               

               Cow position:
               chr5:51935006-51935341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               185-613
               

               Cow position:
               chr5:68330159-68329738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               286
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               188-446
               

               Cow position:
               chr5:29212775-29213028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               189-375
               

               Cow position:
               chr5:74019944-74019752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               189-567
               

               Cow position:
               chr5:41452839-41452467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               191-411
               

               Cow position:
               chr5:29980157-29979928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               191-589
               

               Cow position:
               chr5:17371873-17371451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               43, 80
               

               Conread position:
               193-464
               

               Cow position:
               chr5:64697611-64697890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               194-414
               

               Cow position:
               chr5:40169355-40169130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               194-456
               

               Cow position:
               chr5:69520722-69520991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 144
               

               Conread position:
               194-508
               

               Cow position:
               chr5:12866997-12866672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               194-588
               

               Cow position:
               chr5:30092798-30092385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               196-558
               

               Cow position:
               chr5:66972256-66972645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 88
               

               Conread position:
               196-567
               

               Cow position:
               chr5:55955739-55956134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               196-590
               

               Cow position:
               chr5:23529443-23529050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               196-593
               

               Cow position:
               chr5:16214521-16214933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 47
               

               Conread position:
               197-508
               

               Cow position:
               chr5:59115215-59115533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 85
               

               Conread position:
               197-513
               

               Cow position:
               chr5:30950085-30949758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               197-513
               

               Cow position:
               chr5:65967897-65967568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               198-569
               

               Cow position:
               chr5:11540208-11539826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               199-428
               

               Cow position:
               chr5:62985353-62985596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 167
               

               Conread position:
               200-433
               

               Cow position:
               chr5:21920205-21920457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               200-584
               

               Cow position:
               chr5:57768135-57767749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 29
               

               Conread position:
               202-393
               

               Cow position:
               chr5:71579013-71579212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               205-463
               

               Cow position:
               chr5:52126621-52126877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               207-558
               

               Cow position:
               chr5:47696598-47696245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               208-592
               

               Cow position:
               chr5:35247265-35246858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               210-483
               

               Cow position:
               chr5:56680098-56680383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 137
               

               Conread position:
               215-411
               

               Cow position:
               chr5:51801117-51800918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               220-558
               

               Cow position:
               chr5:33560871-33560523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               221-428
               

               Cow position:
               chr5:12566869-12566669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               221-472
               

               Cow position:
               chr5:65883921-65883656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               8, 133
               

               Conread position:
               221-521
               

               Cow position:
               chr5:61830010-61829697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               221-558
               

               Cow position:
               chr5:7057545-7057182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 150
               

               Conread position:
               221-558
               

               Cow position:
               chr5:12761261-12760905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               225-505
               

               Cow position:
               chr5:54768046-54767760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               229-479
               

               Cow position:
               chr5:14473545-14473283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 256
               

               Conread position:
               231-460
               

               Cow position:
               chr5:36255388-36255153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               231-558
               

               Cow position:
               chr5:73168132-73167799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 125
               

               Conread position:
               232-410
               

               Cow position:
               chr5:35184876-35184697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               233-519
               

               Cow position:
               chr5:76366419-76366133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               233-565
               

               Cow position:
               chr5:31475558-31475906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               236-587
               

               Cow position:
               chr5:50857817-50858180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               238-483
               

               Cow position:
               chr5:53710813-53710562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               239-558
               

               Cow position:
               chr5:29515612-29515309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               240-558
               

               Cow position:
               chr5:25365972-25366314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               241-513
               

               Cow position:
               chr5:60747395-60747121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               241-587
               

               Cow position:
               chr5:49474661-49474313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               243-475
               

               Cow position:
               chr5:39875009-39875243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               243-483
               

               Cow position:
               chr5:38076597-38076356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               243-502
               

               Cow position:
               chr5:49440986-49440724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               243-503
               

               Cow position:
               chr5:45273615-45273351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               243-558
               

               Cow position:
               chr5:12901801-12902134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               244-467
               

               Cow position:
               chr5:57561404-57561634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               249-506
               

               Cow position:
               chr5:58446695-58446956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               249-508
               

               Cow position:
               chr5:23678812-23678549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 169
               

               Conread position:
               250-475
               

               Cow position:
               chr5:56635793-56636014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               250-565
               

               Cow position:
               chr5:64140423-64140760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               251-476
               

               Cow position:
               chr5:58490611-58490849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               251-508
               

               Cow position:
               chr5:41293974-41294238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               253-584
               

               Cow position:
               chr5:36039108-36038764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               254-393
               

               Cow position:
               chr5:56469929-56469786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               254-560
               

               Cow position:
               chr5:35785079-35784789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               196, 14
               

               Conread position:
               255-474
               

               Cow position:
               chr5:23357234-23357447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               255-584
               

               Cow position:
               chr5:18289027-18289360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               256-557
               

               Cow position:
               chr5:53946794-53947113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               256-558
               

               Cow position:
               chr5:36650448-36650770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               259-470
               

               Cow position:
               chr5:21535213-21534997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               259-508
               

               Cow position:
               chr5:55019195-55019447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               259-548
               

               Cow position:
               chr5:57419890-57419591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               260-457
               

               Cow position:
               chr5:34192801-34193007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 181
               

               Conread position:
               260-583
               

               Cow position:
               chr5:46681812-46681483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               263-563
               

               Cow position:
               chr5:50575689-50575989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               267-508
               

               Cow position:
               chr5:61912404-61912146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               267-556
               

               Cow position:
               chr5:33833952-33834253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               268-473
               

               Cow position:
               chr5:35125962-35126172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               268-508
               

               Cow position:
               chr5:1087287-1087050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               268-557
               

               Cow position:
               chr5:71015971-71015671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               22, 74
               

               Conread position:
               268-558
               

               Cow position:
               chr5:46129753-46129452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               269-483
               

               Cow position:
               chr5:59873181-59872953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               269-571
               

               Cow position:
               chr5:30805077-30805378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               270-588
               

               Cow position:
               chr5:61914481-61914815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               271-571
               

               Cow position:
               chr5:41884848-41885143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               272-589
               

               Cow position:
               chr5:65140200-65140548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               278-556
               

               Cow position:
               chr5:63831849-63832129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 89
               

               Conread position:
               278-589
               

               Cow position:
               chr5:41935735-41935409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               280-558
               

               Cow position:
               chr5:19752226-19752516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               286-592
               

               Cow position:
               chr5:57371728-57372051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               289-437
               

               Cow position:
               chr5:30293641-30293491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               289-575
               

               Cow position:
               chr5:12247816-12247509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 175
               

               Conread position:
               290-555
               

               Cow position:
               chr5:11769200-11769484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               290-560
               

               Cow position:
               chr5:57994933-57994663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               188, 59
               

               Conread position:
               291-557
               

               Cow position:
               chr5:28035673-28035938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               292-488
               

               Cow position:
               chr5:1461021-1461219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               292-609
               

               Cow position:
               chr5:43604077-43604402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               293-591
               

               Cow position:
               chr5:20843465-20843144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               294-558
               

               Cow position:
               chr5:61007002-61007279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               294-565
               

               Cow position:
               chr5:59627038-59626750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               295-558
               

               Cow position:
               chr5:7012911-7012634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               298-520
               

               Cow position:
               chr5:57230400-57230170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               24, 224
               

               Conread position:
               299-521
               

               Cow position:
               chr5:63627584-63627362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               300-558
               

               Cow position:
               chr5:61455787-61456062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               310-561
               

               Cow position:
               chr5:15470886-15471136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               311-524
               

               Cow position:
               chr5:453514-453727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               311-581
               

               Cow position:
               chr5:20995140-20994851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               311-595
               

               Cow position:
               chr5:52001666-52001372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               317-475
               

               Cow position:
               chr5:34914594-34914433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               318-557
               

               Cow position:
               chr5:36838918-36839161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 163
               

               Conread position:
               318-558
               

               Cow position:
               chr5:30247558-30247310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               318-589
               

               Cow position:
               chr5:50101416-50101133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               34, 268
               

               Conread position:
               319-483
               

               Cow position:
               chr5:2851551-2851717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               319-508
               

               Cow position:
               chr5:57156351-57156156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               319-521
               

               Cow position:
               chr5:55796002-55795797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               319-557
               

               Cow position:
               chr5:56153577-56153813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 116
               

               Conread position:
               319-584
               

               Cow position:
               chr5:40237176-40237430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 56
               

               Conread position:
               320-521
               

               Cow position:
               chr5:57686777-57686568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               323-475
               

               Cow position:
               chr5:45420167-45420018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               323-485
               

               Cow position:
               chr5:49501858-49501695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               323-526
               

               Cow position:
               chr5:3588993-3589198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               323-558
               

               Cow position:
               chr5:61784761-61784510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               323-563
               

               Cow position:
               chr5:20288297-20288038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               323-587
               

               Cow position:
               chr5:33273657-33273941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               323-588
               

               Cow position:
               chr5:37983130-37983416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               324-558
               

               Cow position:
               chr5:57101558-57101311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               324-599
               

               Cow position:
               chr5:48867493-48867212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               325-492
               

               Cow position:
               chr5:45574399-45574231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               325-519
               

               Cow position:
               chr5:9369298-9369104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               327-508
               

               Cow position:
               chr5:52108296-52108116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               329-474
               

               Cow position:
               chr5:46672178-46672323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               329-508
               

               Cow position:
               chr5:61875515-61875689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               329-557
               

               Cow position:
               chr5:38717288-38717509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               333-476
               

               Cow position:
               chr5:58555111-58555257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               333-484
               

               Cow position:
               chr5:20595439-20595592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               333-558
               

               Cow position:
               chr5:34347752-34347518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               334-478
               

               Cow position:
               chr5:62415986-62415839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               336-589
               

               Cow position:
               chr5:25597816-25598075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               151, 16
               

               Conread position:
               338-502
               

               Cow position:
               chr5:43844684-43844519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               339-588
               

               Cow position:
               chr5:2827358-2827621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               340-513
               

               Cow position:
               chr5:56287519-56287345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               344-558
               

               Cow position:
               chr5:30561919-30562143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               345-571
               

               Cow position:
               chr5:69383243-69383479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               346-557
               

               Cow position:
               chr5:65552719-65552507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               348-609
               

               Cow position:
               chr5:57447674-57447402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               350-485
               

               Cow position:
               chr5:63656470-63656605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               350-558
               

               Cow position:
               chr5:57062536-57062313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               350-591
               

               Cow position:
               chr5:23527638-23527401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               63, 123
               

               Conread position:
               352-457
               

               Cow position:
               chr5:14742209-14742315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               352-589
               

               Cow position:
               chr5:65760534-65760288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               352-609
               

               Cow position:
               chr5:65679975-65679722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               353-483
               

               Cow position:
               chr5:24946236-24946368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               353-485
               

               Cow position:
               chr5:19251574-19251709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               353-508
               

               Cow position:
               chr5:35513211-35513371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               353-552
               

               Cow position:
               chr5:16939598-16939383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               353-592
               

               Cow position:
               chr5:52852967-52853219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               353-596
               

               Cow position:
               chr5:60515032-60514773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 91
               

               Conread position:
               353-600
               

               Cow position:
               chr5:29829899-29829629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               353-611
               

               Cow position:
               chr5:55965898-55965622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 228
               

               Conread position:
               354-486
               

               Cow position:
               chr5:25020770-25020638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               354-508
               

               Cow position:
               chr5:27293887-27293727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 158
               

               Conread position:
               355-519
               

               Cow position:
               chr5:2469209-2469039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               355-554
               

               Cow position:
               chr5:15364267-15364482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               355-590
               

               Cow position:
               chr5:6520009-6520254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               355-598
               

               Cow position:
               chr5:67634519-67634254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 233
               

               Conread position:
               356-524
               

               Cow position:
               chr5:11289394-11289212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               357-508
               

               Cow position:
               chr5:17566438-17566288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               357-553
               

               Cow position:
               chr5:46080143-46079929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               357-571
               

               Cow position:
               chr5:4267670-4267888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 118
               

               Conread position:
               357-571
               

               Cow position:
               chr5:44163369-44163145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               357-583
               

               Cow position:
               chr5:61049332-61049574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               358-557
               

               Cow position:
               chr5:48918811-48919012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               358-558
               

               Cow position:
               chr5:44810238-44810022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               359-558
               

               Cow position:
               chr5:11562721-11562513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 201
               

               Conread position:
               359-563
               

               Cow position:
               chr5:36142989-36143198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               359-563
               

               Cow position:
               chr5:59627102-59627313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               55, 181
               

               Conread position:
               360-556
               

               Cow position:
               chr5:5016432-5016635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               127, 55
               

               Conread position:
               361-508
               

               Cow position:
               chr5:3743326-3743476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               361-588
               

               Cow position:
               chr5:64060450-64060693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               52, 235
               

               Conread position:
               364-484
               

               Cow position:
               chr5:26723455-26723574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               364-518
               

               Cow position:
               chr5:56361803-56361958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               364-566
               

               Cow position:
               chr5:60948140-60948355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               364-589
               

               Cow position:
               chr5:17828472-17828232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 217
               

               Conread position:
               365-558
               

               Cow position:
               chr5:26497669-26497473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 169
               

               Conread position:
               365-589
               

               Cow position:
               chr5:56549372-56549617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               366-521
               

               Cow position:
               chr5:65050202-65050046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               367-567
               

               Cow position:
               chr5:75228189-75227989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 107
               

               Conread position:
               376-594
               

               Cow position:
               chr5:7177170-7177405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               378-555
               

               Cow position:
               chr5:38040543-38040356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               378-556
               

               Cow position:
               chr5:51233998-51233811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 172
               

               Conread position:
               380-589
               

               Cow position:
               chr5:40122584-40122365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               384-560
               

               Cow position:
               chr5:22102587-22102770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               384-569
               

               Cow position:
               chr5:44734698-44734500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               385-563
               

               Cow position:
               chr5:16668725-16668913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               385-618
               

               Cow position:
               chr5:57399224-57398980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 195
               

               Conread position:
               386-571
               

               Cow position:
               chr5:29256678-29256480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               386-589
               

               Cow position:
               chr5:49821459-49821679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               388-557
               

               Cow position:
               chr5:53980723-53980538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               388-557
               

               Cow position:
               chr5:71445423-71445606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               397-587
               

               Cow position:
               chr5:2355560-2355760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 180
               

               Conread position:
               398-558
               

               Cow position:
               chr5:31648463-31648630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               78, 15
               

               Conread position:
               399-567
               

               Cow position:
               chr5:22186460-22186630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               404-594
               

               Cow position:
               chr5:54404807-54404611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               408-558
               

               Cow position:
               chr5:55943663-55943503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               431-584
               

               Cow position:
               chr5:59958249-59958411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-428
Cow position:	chr5:54714110-54713660 (view UCSC Genome Browser custom track)
Alignm length:	454
Alignm identity:	334
Alignm E-value:	0
Alignm gaps (pig, cow):	134, 18
Conread position:	5-244
Cow position:	chr5:46653541-46653783 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	178
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	171, 14
Conread position:	8-529
Cow position:	chr5:16206502-16205973 (view UCSC Genome Browser custom track)
Alignm length:	542
Alignm identity:	380
Alignm E-value:	0
Alignm gaps (pig, cow):	180, 11
Conread position:	13-474
Cow position:	chr5:66257291-66257754 (view UCSC Genome Browser custom track)
Alignm length:	475
Alignm identity:	319
Alignm E-value:	0
Alignm gaps (pig, cow):	169, 14
Conread position:	14-502
Cow position:	chr5:64759091-64758623 (view UCSC Genome Browser custom track)
Alignm length:	498
Alignm identity:	345
Alignm E-value:	0
Alignm gaps (pig, cow):	170, 17
Conread position:	17-483
Cow position:	chr5:53855350-53855833 (view UCSC Genome Browser custom track)
Alignm length:	489
Alignm identity:	351
Alignm E-value:	0
Alignm gaps (pig, cow):	59, 11
Conread position:	17-556
Cow position:	chr5:55756790-55756200 (view UCSC Genome Browser custom track)
Alignm length:	597
Alignm identity:	425
Alignm E-value:	0
Alignm gaps (pig, cow):	152, 11
Conread position:	18-507
Cow position:	chr5:39447887-39447383 (view UCSC Genome Browser custom track)
Alignm length:	515
Alignm identity:	377
Alignm E-value:	0
Alignm gaps (pig, cow):	114, 193
Conread position:	19-246
Cow position:	chr5:46130130-46129897 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	180
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	164, 24
Conread position:	19-270
Cow position:	chr5:46023528-46023266 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	204
Alignm E-value:	0
Alignm gaps (pig, cow):	164, 24
Conread position:	19-394
Cow position:	chr5:58004894-58005283 (view UCSC Genome Browser custom track)
Alignm length:	399
Alignm identity:	297
Alignm E-value:	0
Alignm gaps (pig, cow):	163, 63
Conread position:	19-405
Cow position:	chr5:26790795-26790407 (view UCSC Genome Browser custom track)
Alignm length:	395
Alignm identity:	273
Alignm E-value:	0
Alignm gaps (pig, cow):	165, 104
Conread position:	19-406
Cow position:	chr5:34115297-34115702 (view UCSC Genome Browser custom track)
Alignm length:	413
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	111, 175
Conread position:	19-438
Cow position:	chr5:40357238-40356764 (view UCSC Genome Browser custom track)
Alignm length:	477
Alignm identity:	344
Alignm E-value:	0
Alignm gaps (pig, cow):	111, 208
Conread position:	19-454
Cow position:	chr5:16508741-16509204 (view UCSC Genome Browser custom track)
Alignm length:	468
Alignm identity:	349
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 14
Conread position:	19-455
Cow position:	chr5:23140929-23140490 (view UCSC Genome Browser custom track)
Alignm length:	455
Alignm identity:	319
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 45
Conread position:	19-473
Cow position:	chr5:44994396-44993932 (view UCSC Genome Browser custom track)
Alignm length:	481
Alignm identity:	342
Alignm E-value:	0
Alignm gaps (pig, cow):	82, 113
Conread position:	19-475
Cow position:	chr5:15478758-15479244 (view UCSC Genome Browser custom track)
Alignm length:	490
Alignm identity:	369
Alignm E-value:	0
Alignm gaps (pig, cow):	118, 38
Conread position:	19-483
Cow position:	chr5:43457859-43457404 (view UCSC Genome Browser custom track)
Alignm length:	478
Alignm identity:	314
Alignm E-value:	7e-36
Alignm gaps (pig, cow):	158, 21
Conread position:	19-488
Cow position:	chr5:4218532-4218987 (view UCSC Genome Browser custom track)
Alignm length:	485
Alignm identity:	345
Alignm E-value:	0
Alignm gaps (pig, cow):	161, 15