Cow genome map

Conread name: rpigcf0_003083.y1

Conread position: 163-483
Cow position: chr21:27623383-27623696 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 28

Conread position: 163-490
Cow position: chr21:48484960-48484646 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 227, 10

Conread position: 163-494
Cow position: chr21:2261205-2260874 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 48

Conread position: 163-500
Cow position: chr21:48530987-48531314 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 29

Conread position: 163-501
Cow position: chr21:37517888-37517560 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 47

Conread position: 164-492
Cow position: chr21:12802305-12801984 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 164-501
Cow position: chr21:36163481-36163158 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 34

Conread position: 166-490
Cow position: chr21:34301390-34301700 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 25

Conread position: 166-492
Cow position: chr21:26557571-26557262 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 44

Conread position: 166-499
Cow position: chr21:42558584-42558907 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 166-499
Cow position: chr21:44861782-44861452 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 7

Conread position: 167-474
Cow position: chr21:23603631-23603921 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 43

Conread position: 167-488
Cow position: chr21:16292893-16293218 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 58

Conread position: 168-495
Cow position: chr21:14760065-14760383 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 38

Conread position: 169-501
Cow position: chr21:26835812-26835490 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 43

Conread position: 172-491
Cow position: chr21:4998998-4998690 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 38

Conread position: 174-486
Cow position: chr21:36909301-36909610 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 73, 36

Conread position: 177-492
Cow position: chr21:12365878-12366183 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 178-499
Cow position: chr21:22464280-22464593 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 31

Conread position: 178-499
Cow position: chr21:33245668-33245358 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 213, 77

Conread position: 180-483
Cow position: chr21:2366840-2367127 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 31

Conread position: 180-493
Cow position: chr21:21785596-21785290 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 15

Conread position: 180-501
Cow position: chr21:1058294-1058614 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 30

Conread position: 180-501
Cow position: chr21:13111304-13110992 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 180-501
Cow position: chr21:23283345-23283028 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 31

Conread position: 180-501
Cow position: chr21:47767886-47767578 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 181-491
Cow position: chr21:1765712-1765407 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 181-499
Cow position: chr21:1780848-1781155 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 57, 30

Conread position: 181-501
Cow position: chr21:25344375-25344683 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 167, 11

Conread position: 182-483
Cow position: chr21:4585851-4585562 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 182-488
Cow position: chr21:3047161-3047456 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 10

Conread position: 182-492
Cow position: chr21:13303021-13303325 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 10

Conread position: 182-492
Cow position: chr21:28768939-28768640 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 182-499
Cow position: chr21:27287800-27288109 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 182-501
Cow position: chr21:363148-363460 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 182-501
Cow position: chr21:4905473-4905162 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 10

Conread position: 183-426
Cow position: chr21:18828839-18828601 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 22

Conread position: 183-426
Cow position: chr21:21908085-21907843 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 63, 28

Conread position: 183-426
Cow position: chr21:33316540-33316299 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 40

Conread position: 183-474
Cow position: chr21:28512038-28512319 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 26

Conread position: 183-480
Cow position: chr21:36780951-36781239 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 63, 28

Conread position: 183-483
Cow position: chr21:28617102-28617389 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 63, 28

Conread position: 183-483
Cow position: chr21:28625605-28625894 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 183-484
Cow position: chr21:38450186-38449888 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-486
Cow position: chr21:20243797-20243498 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 28

Conread position: 183-486
Cow position: chr21:36657065-36657370 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 32

Conread position: 183-487
Cow position: chr21:27230294-27230001 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 28

Conread position: 183-488
Cow position: chr21:10000786-10000497 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 206, 27

Conread position: 183-490
Cow position: chr21:27146709-27146411 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-491
Cow position: chr21:32298010-32297707 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-492
Cow position: chr21:149972-150272 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-492
Cow position: chr21:3818606-3818904 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 27

Conread position: 183-492
Cow position: chr21:5857640-5857340 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-492
Cow position: chr21:19351035-19350736 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 183-492
Cow position: chr21:29214659-29214360 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-492
Cow position: chr21:47140196-47139897 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-494
Cow position: chr21:29855170-29855472 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 183-495
Cow position: chr21:725392-725091 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-495
Cow position: chr21:13585623-13585321 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 183-495
Cow position: chr21:44219725-44220034 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 34

Conread position: 183-499
Cow position: chr21:2878016-2877709 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr21:3496680-3496374 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr21:3782598-3782903 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 27

Conread position: 183-499
Cow position: chr21:3923737-3924045 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr21:7666560-7666253 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr21:9209133-9209439 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr21:10436666-10436972 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 49, 27

Conread position: 183-499
Cow position: chr21:10571096-10571403 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 183-499
Cow position: chr21:16890018-16889711 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr21:17144642-17144951 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr21:18601165-18601463 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 28

Conread position: 183-499
Cow position: chr21:19237214-19237521 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 183-499
Cow position: chr21:26399960-26399652 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 61, 28

Conread position: 183-499
Cow position: chr21:27607867-27607560 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr21:27619694-27619387 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr21:30595265-30594949 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr21:31576008-31576317 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 32

Conread position: 183-499
Cow position: chr21:32560142-32559835 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 183-499
Cow position: chr21:39486448-39486142 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 28

Conread position: 183-499
Cow position: chr21:42443111-42442804 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr21:42917619-42917926 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr21:46132500-46132195 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 66, 28

Conread position: 183-499
Cow position: chr21:47429166-47429472 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-500
Cow position: chr21:42464339-42464040 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 28

Conread position: 183-501
Cow position: chr21:471115-471436 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 183-501
Cow position: chr21:750234-750543 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-501
Cow position: chr21:1196363-1196672 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-501
Cow position: chr21:2904967-2904657 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr21:2927736-2927428 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-501
Cow position: chr21:3920716-3920407 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 28

Conread position: 183-501
Cow position: chr21:10854082-10854391 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-501
Cow position: chr21:13070368-13070056 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 28

Conread position: 183-501
Cow position: chr21:18289160-18289466 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 183-501
Cow position: chr21:18979359-18979051 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 183-501
Cow position: chr21:20262840-20262529 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 183-501
Cow position: chr21:22719276-22718976 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 208, 28

Conread position: 183-501
Cow position: chr21:23606167-23606479 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-501
Cow position: chr21:23683034-23683355 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-501
Cow position: chr21:24796529-24796233 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 27

Conread position: 183-501
Cow position: chr21:25472998-25473306 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr21:26831292-26831593 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 22

Conread position: 183-501
Cow position: chr21:28210682-28210990 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 183-501
Cow position: chr21:30250708-30250403 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr21:31512446-31512136 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 183-501
Cow position: chr21:33209697-33210003 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 183-501
Cow position: chr21:34684849-34685155 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 27

Conread position: 183-501
Cow position: chr21:38900272-38900578 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 132

Conread position: 183-501
Cow position: chr21:39401090-39401405 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-501
Cow position: chr21:44281337-44281026 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 184-426
Cow position: chr21:13752109-13752348 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 27

Conread position: 184-480
Cow position: chr21:23341478-23341766 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-480
Cow position: chr21:33107667-33107380 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-490
Cow position: chr21:31252825-31253121 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 26

Conread position: 184-492
Cow position: chr21:5642010-5641712 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 7

Conread position: 184-492
Cow position: chr21:26756896-26756599 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 62, 27

Conread position: 184-492
Cow position: chr21:30966116-30965816 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-492
Cow position: chr21:34900502-34900801 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-496
Cow position: chr21:3813970-3813667 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr21:81570-81873 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 184-499
Cow position: chr21:1752216-1752523 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 184-499
Cow position: chr21:2472949-2472644 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 26

Conread position: 184-499
Cow position: chr21:7038366-7038060 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:7047358-7047054 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:7524944-7525250 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr21:10075437-10075133 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:10756738-10757044 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:11144023-11143717 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:11292533-11292841 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:13735335-13735029 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:16575620-16575314 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:17412792-17412489 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 184-499
Cow position: chr21:18574341-18574647 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 184-499
Cow position: chr21:19614071-19614376 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:19626883-19626577 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:21103545-21103851 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 184-499
Cow position: chr21:21623911-21624217 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:21909852-21910158 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:22856676-22856980 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 60, 21

Conread position: 184-499
Cow position: chr21:23329516-23329209 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:25480098-25480392 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:25598491-25598797 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:26854866-26854560 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:26875418-26875724 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:29954717-29955023 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:30655466-30655772 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:31948389-31948695 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr21:31950240-31950546 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr21:33709673-33709367 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:33770504-33770810 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:34181492-34181798 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:36892405-36892099 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr21:39429446-39429751 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:40479088-40479394 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr21:41795898-41795591 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-500
Cow position: chr21:27375948-27376253 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-500
Cow position: chr21:48459372-48459064 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 184-501
Cow position: chr21:4279134-4279437 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 184-501
Cow position: chr21:13300640-13300957 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 86

Conread position: 184-501
Cow position: chr21:19766345-19766659 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 184-501
Cow position: chr21:24697974-24698288 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 48, 31

Conread position: 184-501
Cow position: chr21:27864023-27863714 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-501
Cow position: chr21:29069819-29069524 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 184-501
Cow position: chr21:33983311-33983005 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 184-501
Cow position: chr21:48638245-48637941 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 28

Conread position: 185-425
Cow position: chr21:27613761-27614003 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 13

Conread position: 185-492
Cow position: chr21:45842175-45841877 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 25

Conread position: 185-499
Cow position: chr21:4559245-4558942 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 26

Conread position: 185-499
Cow position: chr21:5020966-5021271 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 185-499
Cow position: chr21:37924004-37924316 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 25

Conread position: 185-501
Cow position: chr21:34391468-34391165 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 25

Conread position: 186-499
Cow position: chr21:2871216-2870913 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 24

Conread position: 186-499
Cow position: chr21:20370194-20370498 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 186-501
Cow position: chr21:35573379-35573082 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 57, 24

Conread position: 187-499
Cow position: chr21:42540721-42540417 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 24

Conread position: 190-426
Cow position: chr21:17433749-17433516 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 19

Conread position: 190-426
Cow position: chr21:45331468-45331245 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 20

Conread position: 190-491
Cow position: chr21:44671258-44671548 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 133, 14

Conread position: 190-492
Cow position: chr21:9711214-9710918 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 44, 20

Conread position: 190-499
Cow position: chr21:451707-452007 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 56, 20

Conread position: 190-499
Cow position: chr21:33901259-33901559 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 20

Conread position: 191-426
Cow position: chr21:33350207-33350437 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 19

Conread position: 191-500
Cow position: chr21:37298966-37299269 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 101

Conread position: 191-501
Cow position: chr21:23293656-23293353 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 13, 122

Conread position: 191-501
Cow position: chr21:31276231-31276526 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 19

Conread position: 192-499
Cow position: chr21:38848969-38848667 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 193-492
Cow position: chr21:18931998-18932288 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 116

Conread position: 194-483
Cow position: chr21:5595166-5595451 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 181

Conread position: 194-495
Cow position: chr21:37352906-37352619 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 26

Conread position: 196-492
Cow position: chr21:31816-32106 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 25

Conread position: 196-499
Cow position: chr21:34074472-34074770 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 115

Conread position: 197-425
Cow position: chr21:47532539-47532777 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 162

Conread position: 197-491
Cow position: chr21:4473512-4473225 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 198-501
Cow position: chr21:36956465-36956764 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 114

Conread position: 199-400
Cow position: chr21:36297005-36297206 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 99

Conread position: 199-483
Cow position: chr21:5237913-5238193 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 106

Conread position: 199-499
Cow position: chr21:2514682-2514977 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 112

Conread position: 199-499
Cow position: chr21:16695891-16696173 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 35, 68

Conread position: 199-499
Cow position: chr21:44761847-44761553 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 201-501
Cow position: chr21:34252024-34251728 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 111

Conread position: 202-499
Cow position: chr21:28259501-28259800 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 109

Conread position: 204-499
Cow position: chr21:6765185-6764899 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 15

Conread position: 205-492
Cow position: chr21:18494483-18494771 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 179

Conread position: 209-501
Cow position: chr21:14727574-14727853 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 209-501
Cow position: chr21:24130605-24130886 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 210-490
Cow position: chr21:34909712-34909985 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 100

Conread position: 210-495
Cow position: chr21:12153654-12153932 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 210-501
Cow position: chr21:4079878-4080159 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 210-501
Cow position: chr21:10045750-10046041 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 108

Conread position: 210-501
Cow position: chr21:20588550-20588836 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 101

Conread position: 211-499
Cow position: chr21:36711713-36712003 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 101

Conread position: 212-501
Cow position: chr21:20549401-20549113 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 99

Conread position: 215-483
Cow position: chr21:26736785-26736516 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 95

Conread position: 217-501
Cow position: chr21:2935220-2934949 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 218-500
Cow position: chr21:21480652-21480375 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 93

Conread position: 219-474
Cow position: chr21:912433-912186 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 92

Conread position: 220-492
Cow position: chr21:612237-611971 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 90

Conread position: 220-501
Cow position: chr21:48291500-48291224 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 69

Conread position: 221-500
Cow position: chr21:45263486-45263217 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 169, 23

Conread position: 222-490
Cow position: chr21:6619514-6619250 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 50

Conread position: 222-501
Cow position: chr21:642879-643142 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 168, 87

Conread position: 227-501
Cow position: chr21:6697555-6697287 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 19, 84

Conread position: 228-409
Cow position: chr21:47465828-47465644 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 84

Conread position: 229-499
Cow position: chr21:5649445-5649709 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 64

Conread position: 232-492
Cow position: chr21:5344226-5344457 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 57

Conread position: 233-492
Cow position: chr21:8981581-8981328 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 157, 140

Conread position: 236-426
Cow position: chr21:29015614-29015423 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 73

Conread position: 236-501
Cow position: chr21:297268-297524 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 236-501
Cow position: chr21:46912090-46912349 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 73

Conread position: 238-501
Cow position: chr21:6051024-6051287 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 11, 73

Conread position: 242-501
Cow position: chr21:24297207-24296958 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 148, 67

Conread position: 243-490
Cow position: chr21:10514367-10514606 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 147, 42

Conread position: 243-499
Cow position: chr21:13632444-13632692 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 148, 66

Conread position: 243-501
Cow position: chr21:3765883-3765635 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 66, 0

Conread position: 243-501
Cow position: chr21:31836329-31836073 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 193

Conread position: 243-501
Cow position: chr21:32447096-32447347 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 147, 66

Conread position: 245-490
Cow position: chr21:45354993-45355237 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 120, 64

Conread position: 245-501
Cow position: chr21:15742547-15742292 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 119, 64

Conread position: 247-483
Cow position: chr21:37706856-37706631 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 143, 42

Conread position: 247-499
Cow position: chr21:30000024-29999778 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 63

Conread position: 248-501
Cow position: chr21:7672681-7672938 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 61

Conread position: 250-499
Cow position: chr21:27036339-27036581 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 59

Conread position: 251-501
Cow position: chr21:2420067-2420310 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 139, 58

Conread position: 252-500
Cow position: chr21:2657158-2657392 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 58

Conread position: 253-492
Cow position: chr21:26681373-26681142 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 17

Conread position: 253-500
Cow position: chr21:42914178-42913942 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 137, 32

Conread position: 254-477
Cow position: chr21:10263606-10263822 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 83, 40

Conread position: 254-501
Cow position: chr21:14762949-14762704 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 109, 60

Conread position: 254-501
Cow position: chr21:30849372-30849138 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 136, 55

Conread position: 255-499
Cow position: chr21:393588-393824 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 135, 54

Conread position: 259-501
Cow position: chr21:27712865-27712631 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 18

Conread position: 260-499
Cow position: chr21:1179365-1179133 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 131, 49

Conread position: 265-499
Cow position: chr21:17539310-17539537 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 44

Conread position: 266-501
Cow position: chr21:31040863-31040634 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 44

Conread position: 267-483
Cow position: chr21:28923720-28923929 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 30

Conread position: 269-490
Cow position: chr21:24222959-24222748 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 121, 40

Conread position: 269-492
Cow position: chr21:41957603-41957378 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 121, 40

Conread position: 269-501
Cow position: chr21:7564741-7564517 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 121, 7

Conread position: 270-492
Cow position: chr21:31039771-31039556 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 120, 39

Conread position: 270-498
Cow position: chr21:11195714-11195933 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 120, 39

Conread position: 270-499
Cow position: chr21:16794921-16795143 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 39

Conread position: 270-499
Cow position: chr21:39700495-39700273 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 39

Conread position: 270-501
Cow position: chr21:5455408-5455181 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 5

Conread position: 270-501
Cow position: chr21:19702105-19702329 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 120, 39

Conread position: 272-501
Cow position: chr21:37874100-37874323 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 118, 101

Conread position: 273-500
Cow position: chr21:33933800-33933580 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 117, 36

Conread position: 279-477
Cow position: chr21:2495581-2495390 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 111, 31

Conread position: 279-492
Cow position: chr21:4035400-4035197 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 279-501
Cow position: chr21:40013772-40013557 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 30

Conread position: 283-501
Cow position: chr21:21170352-21170137 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 8, 85

Conread position: 284-499
Cow position: chr21:2938624-2938832 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 25

Conread position: 286-492
Cow position: chr21:4541276-4541073 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 23

Conread position: 286-499
Cow position: chr21:25158491-25158696 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 10

Conread position: 286-501
Cow position: chr21:8451442-8451649 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 104, 15

Conread position: 287-499
Cow position: chr21:23900208-23900004 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 103, 21

Conread position: 290-499
Cow position: chr21:2709959-2709757 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 19

Conread position: 295-501
Cow position: chr21:25042094-25042294 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 78

Conread position: 302-499
Cow position: chr21:39672286-39672477 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 71

Conread position: 303-501
Cow position: chr21:7582290-7582100 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 87, 11

Conread position: 303-501
Cow position: chr21:30904988-30904799 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 70

Conread position: 303-501
Cow position: chr21:40244047-40244239 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 87, 69

Conread position: 304-488
Cow position: chr21:28881763-28881941 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 68

Conread position: 305-498
Cow position: chr21:12616758-12616943 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 39

Conread position: 306-494
Cow position: chr21:3467886-3468071 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 14

Conread position: 309-483
Cow position: chr21:28910083-28909916 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 313-499
Cow position: chr21:9743956-9743776 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 60

Conread position: 315-499
Cow position: chr21:16789346-16789524 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 58

Conread position: 315-499
Cow position: chr21:27500420-27500598 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 58

Conread position: 316-501
Cow position: chr21:16612255-16612434 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 56

Conread position: 317-490
Cow position: chr21:4794848-4795016 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 55

Conread position: 317-499
Cow position: chr21:17262485-17262311 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 56

Conread position: 318-499
Cow position: chr21:30688561-30688386 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 55

Conread position: 321-492
Cow position: chr21:9415874-9416038 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 51

Conread position: 321-501
Cow position: chr21:19363819-19363645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 51

Conread position: 322-499
Cow position: chr21:23984651-23984481 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 44

Conread position: 322-501
Cow position: chr21:23821803-23821973 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 68, 13

Conread position: 322-501
Cow position: chr21:31158887-31159058 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 51

Conread position: 323-499
Cow position: chr21:24136551-24136721 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 53

Conread position: 323-499
Cow position: chr21:40267195-40267025 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 53

Conread position: 327-499
Cow position: chr21:21963115-21963281 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 46

Conread position: 327-499
Cow position: chr21:36973177-36973011 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 46

Conread position: 327-501
Cow position: chr21:37479596-37479761 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 44

Conread position: 327-501
Cow position: chr21:46777336-46777168 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 46

Conread position: 328-501
Cow position: chr21:23586501-23586667 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 45

Conread position: 337-490
Cow position: chr21:2984144-2983997 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 36

Conread position: 337-501
Cow position: chr21:41032928-41033089 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 36

Conread position: 348-486
Cow position: chr21:17616658-17616526 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 25

Conread position: 348-500
Cow position: chr21:641245-641388 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 42, 24

Conread position: 360-500
Cow position: chr21:24857981-24858115 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 12

Conread position: 363-499
Cow position: chr21:38120776-38120906 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 9

Show alignments to all cow chromosomes.