Cow genome map

Conread name: rpigcf0_003083.y1

Conread position: 144-501
Cow position: chr25:11584908-11585250 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 9

Conread position: 161-474
Cow position: chr25:38903486-38903183 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 210
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 52

Conread position: 162-499
Cow position: chr25:16136571-16136893 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 11

Conread position: 163-489
Cow position: chr25:9395860-9396182 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 10

Conread position: 163-499
Cow position: chr25:18323942-18323616 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 165-501
Cow position: chr25:12943616-12943286 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 45

Conread position: 166-501
Cow position: chr25:17658032-17658354 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 7

Conread position: 166-501
Cow position: chr25:17992727-17992402 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 26

Conread position: 177-482
Cow position: chr25:394776-395077 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 177-489
Cow position: chr25:14569786-14570093 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 57, 33

Conread position: 179-501
Cow position: chr25:23829686-23829375 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 22

Conread position: 181-491
Cow position: chr25:41097762-41097464 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 10

Conread position: 181-501
Cow position: chr25:41356369-41356058 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 182-426
Cow position: chr25:19367264-19367021 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 28

Conread position: 182-501
Cow position: chr25:16801870-16802185 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 182-501
Cow position: chr25:18181553-18181853 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 29

Conread position: 182-501
Cow position: chr25:18486910-18487215 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 64, 10

Conread position: 183-426
Cow position: chr25:20786099-20785859 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 51, 27

Conread position: 183-461
Cow position: chr25:5823899-5824167 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 183-474
Cow position: chr25:13962240-13962521 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 183-477
Cow position: chr25:28188551-28188268 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 186, 22

Conread position: 183-483
Cow position: chr25:9595749-9596037 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-489
Cow position: chr25:25510325-25510622 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-490
Cow position: chr25:21950563-21950854 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 63, 28

Conread position: 183-492
Cow position: chr25:2110520-2110813 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 27

Conread position: 183-492
Cow position: chr25:13960495-13960797 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 27

Conread position: 183-492
Cow position: chr25:26282460-26282760 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 28

Conread position: 183-492
Cow position: chr25:26923279-26923579 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 183-492
Cow position: chr25:27017563-27017262 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 23

Conread position: 183-493
Cow position: chr25:10749069-10748769 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 27

Conread position: 183-493
Cow position: chr25:36747007-36746715 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 23

Conread position: 183-494
Cow position: chr25:35625803-35625502 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 183-495
Cow position: chr25:12081921-12081620 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 23

Conread position: 183-495
Cow position: chr25:34164126-34163823 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 27

Conread position: 183-498
Cow position: chr25:4488168-4488468 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-498
Cow position: chr25:8572439-8572134 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr25:11956264-11956564 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr25:13955954-13955647 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr25:18886048-18885743 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr25:24654739-24654432 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr25:25480203-25479895 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-499
Cow position: chr25:26456135-26456458 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 27

Conread position: 183-499
Cow position: chr25:28275011-28274706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr25:28863305-28863612 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 183-499
Cow position: chr25:34343474-34343161 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 28

Conread position: 183-499
Cow position: chr25:34659668-34659367 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 183-499
Cow position: chr25:35446376-35446683 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 183-499
Cow position: chr25:35567454-35567149 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 183-499
Cow position: chr25:36765865-36765558 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 28

Conread position: 183-499
Cow position: chr25:41121438-41121746 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 24

Conread position: 183-500
Cow position: chr25:8231452-8231144 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 183-501
Cow position: chr25:166914-167227 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 32

Conread position: 183-501
Cow position: chr25:4858062-4857753 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 27

Conread position: 183-501
Cow position: chr25:8120207-8120516 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 27

Conread position: 183-501
Cow position: chr25:12203899-12204209 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr25:13332849-13333162 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 183-501
Cow position: chr25:13429691-13429387 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 207, 27

Conread position: 183-501
Cow position: chr25:15005637-15005942 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr25:16922360-16922053 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 27

Conread position: 183-501
Cow position: chr25:17994862-17994553 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 183-501
Cow position: chr25:20394629-20394946 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 26

Conread position: 183-501
Cow position: chr25:32607084-32606776 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 189, 32

Conread position: 183-501
Cow position: chr25:33838809-33839127 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 28

Conread position: 183-501
Cow position: chr25:39313457-39313151 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 27

Conread position: 184-413
Cow position: chr25:28920312-28920539 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 28

Conread position: 184-472
Cow position: chr25:18474628-18474910 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 27

Conread position: 184-474
Cow position: chr25:12756001-12755719 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-483
Cow position: chr25:14808540-14808830 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 184-486
Cow position: chr25:30279775-30279484 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 184-490
Cow position: chr25:39386398-39386103 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 184-492
Cow position: chr25:14755978-14755689 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 26

Conread position: 184-492
Cow position: chr25:26681998-26682295 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 26

Conread position: 184-499
Cow position: chr25:7717376-7717682 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr25:10158178-10158484 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:10896296-10895990 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 184-499
Cow position: chr25:14555104-14555410 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:15429243-15428937 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:15453088-15452782 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:15618134-15618438 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:17808342-17808040 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 26

Conread position: 184-499
Cow position: chr25:19139135-19138830 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 26

Conread position: 184-499
Cow position: chr25:20771900-20771596 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 26

Conread position: 184-499
Cow position: chr25:22198018-22198324 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:25873556-25873250 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:27076494-27076800 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:27145859-27146174 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 26

Conread position: 184-499
Cow position: chr25:32609983-32609677 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:33901946-33901640 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:33990231-33989927 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:35649269-35649575 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 184-499
Cow position: chr25:36127471-36127162 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 26

Conread position: 184-499
Cow position: chr25:36351175-36351481 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 184-501
Cow position: chr25:2595418-2595728 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 184-501
Cow position: chr25:11896058-11895747 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 26

Conread position: 184-501
Cow position: chr25:32278598-32278290 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 184-501
Cow position: chr25:40389019-40388717 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 26

Conread position: 185-491
Cow position: chr25:35608289-35607998 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 21

Conread position: 185-499
Cow position: chr25:26791466-26791770 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 25

Conread position: 186-499
Cow position: chr25:4830-5134 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 187-499
Cow position: chr25:15412460-15412763 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 23

Conread position: 187-501
Cow position: chr25:35077230-35076922 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 22

Conread position: 190-426
Cow position: chr25:2500197-2500428 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 20

Conread position: 190-499
Cow position: chr25:21018039-21017735 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 20

Conread position: 191-499
Cow position: chr25:36871296-36871596 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 194-498
Cow position: chr25:24572508-24572808 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 85

Conread position: 195-499
Cow position: chr25:35589514-35589812 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 198-500
Cow position: chr25:18072656-18072942 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 12

Conread position: 198-501
Cow position: chr25:10580646-10580349 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 198-501
Cow position: chr25:34508735-34508439 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 113

Conread position: 199-494
Cow position: chr25:35347346-35347634 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 199-495
Cow position: chr25:25826898-25827194 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 199-499
Cow position: chr25:17553821-17553526 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 199-501
Cow position: chr25:4522374-4522078 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 38

Conread position: 205-499
Cow position: chr25:4401933-4401645 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 210-492
Cow position: chr25:25754544-25754265 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 103

Conread position: 210-492
Cow position: chr25:26939825-26940102 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 101

Conread position: 210-499
Cow position: chr25:34257441-34257725 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 101

Conread position: 210-500
Cow position: chr25:18310228-18310509 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 210-501
Cow position: chr25:38439614-38439901 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 101

Conread position: 211-490
Cow position: chr25:36512753-36513039 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 230

Conread position: 213-500
Cow position: chr25:13941278-13940994 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 31

Conread position: 216-498
Cow position: chr25:19131494-19131765 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 174, 10

Conread position: 216-501
Cow position: chr25:21041280-21041559 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 95

Conread position: 220-428
Cow position: chr25:24222510-24222296 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 92

Conread position: 221-501
Cow position: chr25:14823274-14823007 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 22, 91

Conread position: 225-499
Cow position: chr25:12318368-12318102 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 77

Conread position: 226-501
Cow position: chr25:26111753-26112021 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 231-473
Cow position: chr25:12117481-12117256 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 211, 7

Conread position: 234-500
Cow position: chr25:11437325-11437064 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 77

Conread position: 242-417
Cow position: chr25:22435285-22435105 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 135

Conread position: 242-501
Cow position: chr25:6892039-6891788 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 128, 49

Conread position: 242-501
Cow position: chr25:34000171-34000424 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 148, 131

Conread position: 243-426
Cow position: chr25:23571495-23571308 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 36, 71

Conread position: 243-469
Cow position: chr25:40338046-40338265 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 38

Conread position: 243-499
Cow position: chr25:22314695-22314938 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 146, 20

Conread position: 243-499
Cow position: chr25:24168440-24168192 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 148, 77

Conread position: 244-492
Cow position: chr25:36778988-36779226 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 146, 19

Conread position: 245-495
Cow position: chr25:31586533-31586773 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 246-501
Cow position: chr25:14791249-14791492 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 144, 63

Conread position: 247-499
Cow position: chr25:10011233-10010982 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 68

Conread position: 251-499
Cow position: chr25:3992286-3992527 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 58

Conread position: 257-488
Cow position: chr25:11662308-11662089 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 19

Conread position: 267-492
Cow position: chr25:6118331-6118111 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 45

Conread position: 267-501
Cow position: chr25:13569660-13569428 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 41

Conread position: 270-493
Cow position: chr25:13787466-13787682 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 120, 39

Conread position: 270-495
Cow position: chr25:10504822-10504603 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 111, 44

Conread position: 270-499
Cow position: chr25:19586818-19586597 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 39

Conread position: 270-499
Cow position: chr25:28272829-28273052 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 121, 103

Conread position: 270-501
Cow position: chr25:35296267-35296041 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 104, 39

Conread position: 273-426
Cow position: chr25:6226570-6226722 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 36

Conread position: 273-499
Cow position: chr25:20652454-20652235 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 36

Conread position: 273-501
Cow position: chr25:3145366-3145585 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 118, 21

Conread position: 274-501
Cow position: chr25:11826986-11826765 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 35

Conread position: 275-483
Cow position: chr25:13736883-13736684 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 276-501
Cow position: chr25:14720012-14720223 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 33

Conread position: 277-501
Cow position: chr25:26654427-26654646 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 35

Conread position: 279-493
Cow position: chr25:8482789-8482582 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 30

Conread position: 279-499
Cow position: chr25:5461699-5461912 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 30

Conread position: 279-499
Cow position: chr25:13967139-13966927 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 106, 30

Conread position: 283-501
Cow position: chr25:12824501-12824290 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 107, 61

Conread position: 284-495
Cow position: chr25:35339864-35340069 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 106, 25

Conread position: 284-500
Cow position: chr25:10367157-10366948 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 106, 25

Conread position: 286-426
Cow position: chr25:27521606-27521467 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 104, 15

Conread position: 287-501
Cow position: chr25:6988305-6988098 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 22

Conread position: 288-493
Cow position: chr25:27593840-27594031 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 22

Conread position: 292-495
Cow position: chr25:22530825-22531020 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 17

Conread position: 293-501
Cow position: chr25:27868348-27868549 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 87, 16

Conread position: 296-501
Cow position: chr25:16738400-16738206 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 13

Conread position: 297-499
Cow position: chr25:27143391-27143194 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 75

Conread position: 302-483
Cow position: chr25:20060482-20060307 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 71

Conread position: 302-499
Cow position: chr25:3140852-3141043 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 71

Conread position: 303-500
Cow position: chr25:26911212-26911018 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 70

Conread position: 303-501
Cow position: chr25:5538969-5539161 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 87, 70

Conread position: 304-483
Cow position: chr25:20403171-20402998 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 68

Conread position: 304-492
Cow position: chr25:9641893-9642074 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 10

Conread position: 305-495
Cow position: chr25:11044192-11044376 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 85, 68

Conread position: 306-501
Cow position: chr25:34156224-34156413 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 67

Conread position: 314-499
Cow position: chr25:13067424-13067245 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 77, 59

Conread position: 316-499
Cow position: chr25:11050949-11051120 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 319-493
Cow position: chr25:38570031-38569866 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 55

Conread position: 320-499
Cow position: chr25:3688979-3689152 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 53

Conread position: 322-501
Cow position: chr25:11294360-11294532 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 22

Conread position: 322-501
Cow position: chr25:12171031-12171201 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 51

Conread position: 327-499
Cow position: chr25:12208062-12208228 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 45

Conread position: 327-499
Cow position: chr25:13446346-13446183 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 327-499
Cow position: chr25:19570825-19570660 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 49

Conread position: 327-501
Cow position: chr25:7800707-7800875 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 45

Conread position: 328-492
Cow position: chr25:17119613-17119455 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 45

Conread position: 328-499
Cow position: chr25:21121157-21121322 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 45

Conread position: 328-499
Cow position: chr25:26187959-26187794 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 45

Conread position: 334-501
Cow position: chr25:13720962-13720801 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 39

Conread position: 336-499
Cow position: chr25:20069307-20069461 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 37

Conread position: 337-483
Cow position: chr25:17191549-17191409 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 35

Conread position: 337-499
Cow position: chr25:26618034-26618190 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 35

Conread position: 338-501
Cow position: chr25:26057925-26058081 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 35

Conread position: 339-499
Cow position: chr25:16067846-16067998 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 343-499
Cow position: chr25:37469359-37469515 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 90

Conread position: 348-501
Cow position: chr25:13325194-13325341 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 42, 25

Conread position: 359-501
Cow position: chr25:14274044-14274180 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 14

Show alignments to all cow chromosomes.