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Cow genome map

           
Conread name:
           
rpigcf0_003083.y1
        

               
Conread position:
               
32-486
               

               
Cow position:
               
chr4:66173506-66173075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
93-499
               

               
Cow position:
               
chr4:18282095-18282494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
298, 216
               

               
Conread position:
               
154-500
               

               
Cow position:
               
chr4:6210091-6210423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr4:53822287-53822624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
162-491
               

               
Cow position:
               
chr4:2190935-2190620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr4:12558075-12557764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr4:12237886-12237559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr4:36899739-36900063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
162-499
               

               
Cow position:
               
chr4:39421958-39422285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr4:33366820-33366498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
163-481
               

               
Cow position:
               
chr4:40576504-40576192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
206, 29
               

               
Conread position:
               
163-490
               

               
Cow position:
               
chr4:66119407-66119090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
163-501
               

               
Cow position:
               
chr4:17376053-17375724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
165-426
               

               
Cow position:
               
chr4:19006874-19007135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
166-473
               

               
Cow position:
               
chr4:11309012-11309309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr4:33613231-33612916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr4:54931262-54930939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
172-501
               

               
Cow position:
               
chr4:16602639-16602319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
175-501
               

               
Cow position:
               
chr4:49794101-49794415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
177-483
               

               
Cow position:
               
chr4:41186951-41186649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
177-496
               

               
Cow position:
               
chr4:8858649-8858969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr4:10553615-10553933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
178-499
               

               
Cow position:
               
chr4:23303891-23303579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
178-499
               

               
Cow position:
               
chr4:28613237-28613553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
179-426
               

               
Cow position:
               
chr4:52633008-52632763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr4:13877618-13877915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr4:19255744-19256040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
180-487
               

               
Cow position:
               
chr4:62000029-61999732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
180-495
               

               
Cow position:
               
chr4:55522725-55523030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
180-501
               

               
Cow position:
               
chr4:46492314-46492635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
181-501
               

               
Cow position:
               
chr4:38706531-38706221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 29
               

               
Conread position:
               
182-426
               

               
Cow position:
               
chr4:48410124-48409883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr4:26347662-26347361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr4:8678184-8678492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr4:37553620-37553312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
182-500
               

               
Cow position:
               
chr4:17833466-17833172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr4:7250138-7249835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 10
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr4:9519721-9520030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr4:23150276-23149967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr4:34172144-34171835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
182-501
               

               
Cow position:
               
chr4:49408904-49409199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr4:28399979-28399733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr4:30004628-30004388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:1237680-1237437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:2226382-2226143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:16062633-16062873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:18106497-18106256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-428
               

               
Cow position:
               
chr4:61242651-61242893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
183-461
               

               
Cow position:
               
chr4:67435514-67435786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
183-463
               

               
Cow position:
               
chr4:1927252-1926981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr4:18335564-18335282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr4:25226356-25226637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-479
               

               
Cow position:
               
chr4:54974362-54974646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
183-481
               

               
Cow position:
               
chr4:10885020-10885307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
183-482
               

               
Cow position:
               
chr4:47087666-47087370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:2349368-2349078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:2680803-2681084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:13143096-13142808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:19420753-19421050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:29035344-29035634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
207, 28
               

               
Conread position:
               
183-486
               

               
Cow position:
               
chr4:44901647-44901941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-488
               

               
Cow position:
               
chr4:10994117-10993823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr4:6034663-6034368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr4:11390159-11389856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr4:25983661-25983960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr4:36755142-36755446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-490
               

               
Cow position:
               
chr4:48030238-48030538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:6862822-6862522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:12560442-12560749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:13979426-13979723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:14142699-14142996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:20644008-20644308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:26874525-26874225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:43840597-43840299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:61673599-61673300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr4:64875478-64875779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr4:20298658-20298962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr4:61817021-61816719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-494
               

               
Cow position:
               
chr4:67407913-67408220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:3252170-3251874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:4419429-4419732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:14152506-14152802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:18108226-18108517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
183-495
               

               
Cow position:
               
chr4:33433826-33433528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-498
               

               
Cow position:
               
chr4:27504386-27504684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:3354563-3354256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:4185550-4185852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:5441278-5440971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:8558932-8558633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:9041330-9041637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:10044386-10044079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:11641193-11640886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:11872484-11872180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 26
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:11930345-11930656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:12752204-12752510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:14471145-14470836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:16364704-16365011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:17033118-17032811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:18812854-18812549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:20616335-20616024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:23853624-23853936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:33372386-33372080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:38584260-38584567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:38864434-38864741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:43316273-43315966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:43896114-43895805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:44733999-44734307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:44839458-44839153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:46711223-46710916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:48411527-48411220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:52601482-52601788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:54757881-54757582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:63430854-63431161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:66668695-66668402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
183-499
               

               
Cow position:
               
chr4:68470824-68470517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-500
               

               
Cow position:
               
chr4:52086535-52086836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:2263328-2263020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:3687356-3687662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:3893153-3893464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:8413685-8413376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:8704195-8704505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:12588976-12589282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:18547115-18547424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:19502372-19502068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:21532195-21531901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:21553753-21553448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:23508704-23509012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:24002541-24002235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:27546184-27546493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:28835945-28836266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:30573882-30574190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:33496942-33497251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:36025888-36025582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:36578168-36577860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:40410927-40410621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:44450156-44449855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 18
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:44494158-44493852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:46370539-46370224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:46862158-46861842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:52178123-52177814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:54695650-54695344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:61450206-61450502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:61973041-61972741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr4:68944749-68944442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr4:58834978-58834734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
184-427
               

               
Cow position:
               
chr4:30690173-30690404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
184-462
               

               
Cow position:
               
chr4:533674-533942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
184-481
               

               
Cow position:
               
chr4:15056187-15056475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-483
               

               
Cow position:
               
chr4:46709099-46708811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
184-487
               

               
Cow position:
               
chr4:33357292-33357584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:10424861-10425160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:12657688-12657979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:16642199-16642497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:33146241-33146541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-492
               

               
Cow position:
               
chr4:62453604-62453305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
184-494
               

               
Cow position:
               
chr4:26984654-26984944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
184-494
               

               
Cow position:
               
chr4:65919049-65919349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:120306-120001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:162464-162770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:606989-607295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:652411-652717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:3170702-3171001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:3446813-3446507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:3800905-3800598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:6547305-6547000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:7080273-7080579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:7138982-7138676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:7260427-7260121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:8414934-8414628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:9375709-9375403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:13375001-13375307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:14047808-14048114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:14967463-14967769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:16766122-16765816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:17235403-17235706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:18331470-18331776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:18600017-18599711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:18684693-18684387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:18738360-18738054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:18976073-18975766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:20025020-20025326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:21044780-21044474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:26131542-26131848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:27178207-27178512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:27540047-27540353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:28456649-28456343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:28855494-28855800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:29515366-29515671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:29834006-29834312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:30474764-30475070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:30541545-30541851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:31484330-31484024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:31774935-31774629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:31956119-31955813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:37707771-37707465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:38834730-38834424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:41429848-41429542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:42596624-42596931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:42616569-42616874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:42865391-42865697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:44663300-44662991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:44777807-44777501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:46020974-46021280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:46254092-46253786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:46585523-46585217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:46743863-46743558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:47020687-47020992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:47116687-47116991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:47264161-47264467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:48733060-48733366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:48959468-48959163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:57493903-57493597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:58577283-58576977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:58748029-58748335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:59838684-59838990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:60677349-60677044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:61625205-61624894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:62120391-62120698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:62221980-62221675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
184-499
               

               
Cow position:
               
chr4:64156112-64156418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr4:25878824-25879129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr4:25972319-25972630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
184-500
               

               
Cow position:
               
chr4:58948547-58948219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:15119379-15119679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:17877341-17877650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:18519136-18519461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:27337594-27337902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:28173489-28173182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:29560145-29559837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:31535199-31535507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:34223318-34223626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:45114007-45113699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr4:51898426-51898736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
185-463
               

               
Cow position:
               
chr4:23847775-23847513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
185-483
               

               
Cow position:
               
chr4:4127064-4127347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
185-492
               

               
Cow position:
               
chr4:25596103-25595805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
185-499
               

               
Cow position:
               
chr4:17752194-17752499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr4:17775162-17774858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
185-501
               

               
Cow position:
               
chr4:55271331-55271025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
186-499
               

               
Cow position:
               
chr4:56191779-56191475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
186-499
               

               
Cow position:
               
chr4:60579744-60579440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
186-499
               

               
Cow position:
               
chr4:65198415-65198111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
186-501
               

               
Cow position:
               
chr4:19541551-19541854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
186-501
               

               
Cow position:
               
chr4:23655423-23655728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
189-501
               

               
Cow position:
               
chr4:37169383-37169079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
190-495
               

               
Cow position:
               
chr4:21741405-21741699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
191-499
               

               
Cow position:
               
chr4:18672615-18672914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
191-501
               

               
Cow position:
               
chr4:57239884-57240183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr4:6414141-6414442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr4:6446145-6446446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
194-491
               

               
Cow position:
               
chr4:3268871-3268583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
194-501
               

               
Cow position:
               
chr4:47774197-47773898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
194-501
               

               
Cow position:
               
chr4:56233125-56233425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
195-501
               

               
Cow position:
               
chr4:15668864-15668561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
195-501
               

               
Cow position:
               
chr4:29805948-29805646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
196-463
               

               
Cow position:
               
chr4:39458061-39458322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
196-495
               

               
Cow position:
               
chr4:56177242-56177544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
196-499
               

               
Cow position:
               
chr4:4487356-4487655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 179
               

               
Conread position:
               
196-501
               

               
Cow position:
               
chr4:6653181-6653474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
198-426
               

               
Cow position:
               
chr4:10411599-10411828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
198-483
               

               
Cow position:
               
chr4:14813962-14814243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
198-485
               

               
Cow position:
               
chr4:11201257-11201538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
198-490
               

               
Cow position:
               
chr4:42672607-42672894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
198-492
               

               
Cow position:
               
chr4:359277-359566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
198-499
               

               
Cow position:
               
chr4:22052031-22051735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
198-499
               

               
Cow position:
               
chr4:30220237-30219948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
198-501
               

               
Cow position:
               
chr4:10135981-10136276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
198-501
               

               
Cow position:
               
chr4:22850285-22849986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr4:13327516-13327238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
199-491
               

               
Cow position:
               
chr4:64791334-64791609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
199-492
               

               
Cow position:
               
chr4:1007284-1007573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
199-493
               

               
Cow position:
               
chr4:45644870-45644587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
199-495
               

               
Cow position:
               
chr4:27287715-27287418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
199-499
               

               
Cow position:
               
chr4:22841787-22842082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
199-501
               

               
Cow position:
               
chr4:19492954-19493254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
201-499
               

               
Cow position:
               
chr4:489053-488756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
202-501
               

               
Cow position:
               
chr4:67444569-67444879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 188
               

               
Conread position:
               
203-499
               

               
Cow position:
               
chr4:39009408-39009701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 7
               

               
Conread position:
               
204-499
               

               
Cow position:
               
chr4:46526444-46526731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
209-501
               

               
Cow position:
               
chr4:26008894-26009180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
210-492
               

               
Cow position:
               
chr4:21589157-21588882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
210-493
               

               
Cow position:
               
chr4:1368366-1368096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
210-500
               

               
Cow position:
               
chr4:5984584-5984310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
210-501
               

               
Cow position:
               
chr4:18255312-18255598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
210-501
               

               
Cow position:
               
chr4:43370408-43370116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
212-495
               

               
Cow position:
               
chr4:65826418-65826138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
213-474
               

               
Cow position:
               
chr4:63096683-63096939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
213-499
               

               
Cow position:
               
chr4:6395497-6395778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
214-495
               

               
Cow position:
               
chr4:46456618-46456341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
214-501
               

               
Cow position:
               
chr4:42638908-42638621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
215-492
               

               
Cow position:
               
chr4:54260623-54260354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr4:35940543-35940300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
216-483
               

               
Cow position:
               
chr4:5874408-5874671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
216-492
               

               
Cow position:
               
chr4:5610615-5610345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr4:30997406-30997692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr4:54170827-54171102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
217-483
               

               
Cow position:
               
chr4:26323198-26323458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
217-492
               

               
Cow position:
               
chr4:64039583-64039837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
219-499
               

               
Cow position:
               
chr4:49175902-49176176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
219-501
               

               
Cow position:
               
chr4:59384050-59383773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
220-494
               

               
Cow position:
               
chr4:66548332-66548057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
220-499
               

               
Cow position:
               
chr4:46152017-46151740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
220-501
               

               
Cow position:
               
chr4:14230168-14229891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
220-501
               

               
Cow position:
               
chr4:18602799-18602523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
220-501
               

               
Cow position:
               
chr4:31174713-31174996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
222-501
               

               
Cow position:
               
chr4:33020226-33019952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
223-499
               

               
Cow position:
               
chr4:60124317-60124046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
224-499
               

               
Cow position:
               
chr4:18186980-18186710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
225-499
               

               
Cow position:
               
chr4:10420663-10420931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
227-491
               

               
Cow position:
               
chr4:51850664-51850919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
227-499
               

               
Cow position:
               
chr4:42381889-42381622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
228-425
               

               
Cow position:
               
chr4:46668050-46668249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
228-499
               

               
Cow position:
               
chr4:41639744-41640007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
231-492
               

               
Cow position:
               
chr4:2253619-2253873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
232-501
               

               
Cow position:
               
chr4:38067362-38067617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 76
               

               
Conread position:
               
233-501
               

               
Cow position:
               
chr4:19574958-19575219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
234-499
               

               
Cow position:
               
chr4:64061599-64061339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chr4:21603010-21602761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
236-499
               

               
Cow position:
               
chr4:4169252-4169508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
236-499
               

               
Cow position:
               
chr4:17091526-17091270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
236-501
               

               
Cow position:
               
chr4:61391722-61391467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr4:22101788-22101543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
243-426
               

               
Cow position:
               
chr4:570081-570262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
147, 71
               

               
Conread position:
               
243-480
               

               
Cow position:
               
chr4:11091197-11090967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
243-487
               

               
Cow position:
               
chr4:61272152-61271909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
243-491
               

               
Cow position:
               
chr4:54334856-54334626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
243-495
               

               
Cow position:
               
chr4:48499308-48499560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:14386834-14386585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:29529379-29529128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:36350294-36350543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:53829915-53830164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
243-499
               

               
Cow position:
               
chr4:67394683-67394932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr4:38799719-38799459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr4:53125614-53125870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
243-500
               

               
Cow position:
               
chr4:53832534-53832784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
243-501
               

               
Cow position:
               
chr4:41441049-41441299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
243-501
               

               
Cow position:
               
chr4:49814531-49814280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
243-501
               

               
Cow position:
               
chr4:56409649-56409916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 144
               

               
Conread position:
               
244-491
               

               
Cow position:
               
chr4:1404524-1404761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
244-491
               

               
Cow position:
               
chr4:23526163-23526415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 140
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr4:18099484-18099254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
246-499
               

               
Cow position:
               
chr4:26538108-26538354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
249-498
               

               
Cow position:
               
chr4:44073317-44073081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
140, 64
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chr4:1864640-1864882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
251-493
               

               
Cow position:
               
chr4:61898042-61897806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
254-487
               

               
Cow position:
               
chr4:4319647-4319422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
254-501
               

               
Cow position:
               
chr4:59643073-59643312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
255-483
               

               
Cow position:
               
chr4:22861427-22861200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
255-501
               

               
Cow position:
               
chr4:7429817-7430055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
256-499
               

               
Cow position:
               
chr4:21943254-21943018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
256-499
               

               
Cow position:
               
chr4:33090257-33090015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
256-499
               

               
Cow position:
               
chr4:38934882-38935110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
257-499
               

               
Cow position:
               
chr4:32658379-32658144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
257-501
               

               
Cow position:
               
chr4:47047238-47047474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
258-501
               

               
Cow position:
               
chr4:26163472-26163240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr4:39002253-39002418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
259-474
               

               
Cow position:
               
chr4:5631788-5631581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
262-492
               

               
Cow position:
               
chr4:22906549-22906765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
262-500
               

               
Cow position:
               
chr4:52017344-52017117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
262-501
               

               
Cow position:
               
chr4:19584199-19584438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
265-501
               

               
Cow position:
               
chr4:19096802-19097026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
265-501
               

               
Cow position:
               
chr4:37620388-37620153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
270-497
               

               
Cow position:
               
chr4:51002665-51002882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr4:24094458-24094236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr4:33097446-33097226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
272-483
               

               
Cow position:
               
chr4:20328201-20327996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
272-501
               

               
Cow position:
               
chr4:24119403-24119177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
272-501
               

               
Cow position:
               
chr4:27664416-27664636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
273-499
               

               
Cow position:
               
chr4:37584397-37584178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
274-490
               

               
Cow position:
               
chr4:19410006-19410221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
276-499
               

               
Cow position:
               
chr4:60907769-60907562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr4:22089332-22089543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
278-491
               

               
Cow position:
               
chr4:7501404-7501610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
278-491
               

               
Cow position:
               
chr4:26400475-26400681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
278-501
               

               
Cow position:
               
chr4:560922-561135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
279-499
               

               
Cow position:
               
chr4:51903121-51903334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
280-499
               

               
Cow position:
               
chr4:7258906-7258695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
282-490
               

               
Cow position:
               
chr4:11191486-11191687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
283-492
               

               
Cow position:
               
chr4:4672809-4672608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
283-495
               

               
Cow position:
               
chr4:57931424-57931629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
283-501
               

               
Cow position:
               
chr4:67706338-67706546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
284-499
               

               
Cow position:
               
chr4:44700407-44700199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr4:13271675-13271874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
285-499
               

               
Cow position:
               
chr4:48894056-48894263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
285-499
               

               
Cow position:
               
chr4:53999995-53999788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
285-500
               

               
Cow position:
               
chr4:39232002-39231792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
285-501
               

               
Cow position:
               
chr4:41866735-41866945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
285-501
               

               
Cow position:
               
chr4:55508892-55508685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
287-501
               

               
Cow position:
               
chr4:56852426-56852631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr4:46596702-46596889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
289-501
               

               
Cow position:
               
chr4:46529501-46529296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
290-498
               

               
Cow position:
               
chr4:27997213-27997415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
296-501
               

               
Cow position:
               
chr4:27466231-27466429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
297-501
               

               
Cow position:
               
chr4:11924855-11924658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
302-482
               

               
Cow position:
               
chr4:19835714-19835541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
302-500
               

               
Cow position:
               
chr4:11922179-11921992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
302-501
               

               
Cow position:
               
chr4:27277002-27276809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
303-492
               

               
Cow position:
               
chr4:21233539-21233357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
87, 69
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:17283022-17282832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:22086438-22086248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
303-499
               

               
Cow position:
               
chr4:25045556-25045366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr4:8439901-8439710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
303-501
               

               
Cow position:
               
chr4:30779293-30779101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
304-500
               

               
Cow position:
               
chr4:15813795-15813608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
307-501
               

               
Cow position:
               
chr4:9815804-9815618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
308-501
               

               
Cow position:
               
chr4:17616243-17616430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr4:12260503-12260318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
310-455
               

               
Cow position:
               
chr4:19598134-19597995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
311-483
               

               
Cow position:
               
chr4:34383798-34383634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
311-493
               

               
Cow position:
               
chr4:14131055-14131231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
312-499
               

               
Cow position:
               
chr4:7584623-7584803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr4:29189081-29188903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
315-501
               

               
Cow position:
               
chr4:10731771-10731953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
316-483
               

               
Cow position:
               
chr4:1014625-1014786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
317-492
               

               
Cow position:
               
chr4:60788766-60788935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
318-501
               

               
Cow position:
               
chr4:11918113-11917939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr4:7810214-7810391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
324-499
               

               
Cow position:
               
chr4:47894991-47894822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
327-499
               

               
Cow position:
               
chr4:28676646-28676480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
327-499
               

               
Cow position:
               
chr4:45712059-45711893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
327-499
               

               
Cow position:
               
chr4:54962368-54962534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
327-501
               

               
Cow position:
               
chr4:3421213-3421380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
327-501
               

               
Cow position:
               
chr4:25197931-25197763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
337-494
               

               
Cow position:
               
chr4:24686360-24686209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
337-499
               

               
Cow position:
               
chr4:24671608-24671444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
337-501
               

               
Cow position:
               
chr4:21257550-21257395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
343-499
               

               
Cow position:
               
chr4:55395065-55395215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
345-501
               

               
Cow position:
               
chr4:48142364-48142514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
348-495
               

               
Cow position:
               
chr4:46258068-46258209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
350-501
               

               
Cow position:
               
chr4:3283882-3283737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
364-501
               

               
Cow position:
               
chr4:49089095-49089227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 64
               
Show alignments to all cow chromosomes.