Cow genome map
Conread name: | rpigcf0_003920.y1 |
Conread position: | 201-492 |
Cow position: | chr1:69678650-69678367 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 214 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 7, 12 |
Conread position: | 208-523 |
Cow position: | chr1:68827224-68826914 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 192 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 221, 91 |
Conread position: | 237-506 |
Cow position: | chr1:82884674-82884413 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 21 |
Conread position: | 238-509 |
Cow position: | chr1:57576054-57575780 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 55 |
Conread position: | 238-523 |
Cow position: | chr1:45535414-45535697 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 25 |
Conread position: | 242-499 |
Cow position: | chr1:99136714-99136462 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 16 |
Conread position: | 242-501 |
Cow position: | chr1:71946654-71946404 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 16 |
Conread position: | 242-510 |
Cow position: | chr1:52039353-52039612 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 16 |
Conread position: | 242-511 |
Cow position: | chr1:84255469-84255745 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 38 |
Conread position: | 242-515 |
Cow position: | chr1:24133339-24133077 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 242-520 |
Cow position: | chr1:81613101-81613380 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 20 |
Conread position: | 242-520 |
Cow position: | chr1:85028677-85028943 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 195 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 276, 16 |
Conread position: | 249-509 |
Cow position: | chr1:99808003-99807742 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 187 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 19, 53 |
Conread position: | 250-518 |
Cow position: | chr1:41004647-41004375 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 72 |
Conread position: | 250-523 |
Cow position: | chr1:79165368-79165092 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 19 |
Conread position: | 251-506 |
Cow position: | chr1:33331349-33331110 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 199 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 198, 48 |
Conread position: | 251-513 |
Cow position: | chr1:53458430-53458680 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 201 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 54, 7 |
Conread position: | 251-518 |
Cow position: | chr1:62964004-62964261 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 9 |
Conread position: | 251-520 |
Cow position: | chr1:3061871-3061597 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 195 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 17, 159 |
Conread position: | 251-523 |
Cow position: | chr1:48105711-48105440 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 7 |
Conread position: | 252-511 |
Cow position: | chr1:32341483-32341229 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 183 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 8, 48 |
Conread position: | 252-523 |
Cow position: | chr1:54199656-54199389 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 198 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 8, 48 |
Conread position: | 253-512 |
Cow position: | chr1:89349700-89349943 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 15, 109 |
Conread position: | 253-520 |
Cow position: | chr1:61564517-61564786 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 254-494 |
Cow position: | chr1:21460594-21460833 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 11, 38 |
Conread position: | 254-507 |
Cow position: | chr1:74822174-74822426 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 202 |
Conread position: | 254-520 |
Cow position: | chr1:40599776-40600032 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 209 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 12, 58 |
Conread position: | 255-509 |
Cow position: | chr1:51628775-51628519 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 194 |
Conread position: | 257-520 |
Cow position: | chr1:14379801-14379545 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 86 |
Conread position: | 258-511 |
Cow position: | chr1:26896094-26895845 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 192, 120 |
Conread position: | 258-522 |
Cow position: | chr1:25383390-25383655 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 107 |
Conread position: | 259-518 |
Cow position: | chr1:95499763-95499501 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 40 |
Conread position: | 260-516 |
Cow position: | chr1:60707135-60707388 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 191 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 7, 119 |
Conread position: | 262-490 |
Cow position: | chr1:61392056-61391829 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 37 |
Conread position: | 262-507 |
Cow position: | chr1:69539434-69539674 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 180 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 186, 37 |
Conread position: | 263-507 |
Cow position: | chr1:12596167-12595927 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 72 |
Conread position: | 263-519 |
Cow position: | chr1:50679549-50679293 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 198 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 163, 12 |
Conread position: | 263-520 |
Cow position: | chr1:80899844-80900107 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 152, 36 |
Conread position: | 264-514 |
Cow position: | chr1:90423349-90423100 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 168, 183 |
Conread position: | 265-513 |
Cow position: | chr1:1403732-1403499 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 181 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 183, 53 |
Conread position: | 265-520 |
Cow position: | chr1:99614190-99614436 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 190 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 266-502 |
Cow position: | chr1:43505262-43505496 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 97 |
Conread position: | 266-511 |
Cow position: | chr1:41696800-41697039 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 11 |
Conread position: | 266-515 |
Cow position: | chr1:5873232-5872983 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 192 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 161, 33 |
Conread position: | 266-519 |
Cow position: | chr1:1981371-1981127 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 183, 101 |
Conread position: | 266-522 |
Cow position: | chr1:101007875-101007631 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 179 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 161, 55 |
Conread position: | 267-522 |
Cow position: | chr1:68818056-68817808 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 32 |
Conread position: | 267-523 |
Cow position: | chr1:56748330-56748591 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 32 |
Conread position: | 270-518 |
Cow position: | chr1:44164822-44165070 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 168 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 178, 29 |
Conread position: | 271-513 |
Cow position: | chr1:47008771-47009013 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 179 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 27, 124 |
Conread position: | 275-518 |
Cow position: | chr1:78857575-78857334 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 25 |
Conread position: | 275-523 |
Cow position: | chr1:47233727-47233488 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 99 |
Conread position: | 276-513 |
Cow position: | chr1:50634657-50634418 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 170 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 182, 230 |
Conread position: | 279-497 |
Cow position: | chr1:29671772-29671555 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 114, 106 |
Conread position: | 279-501 |
Cow position: | chr1:68951384-68951598 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 169, 11 |
Conread position: | 280-512 |
Cow position: | chr1:3137686-3137912 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 173 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 141, 41 |
Conread position: | 281-512 |
Cow position: | chr1:63905720-63905489 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 167, 70 |
Conread position: | 282-515 |
Cow position: | chr1:71119266-71119504 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 146, 59 |
Conread position: | 286-520 |
Cow position: | chr1:94403975-94404201 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 184 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 166, 85 |
Conread position: | 287-511 |
Cow position: | chr1:71079193-71078976 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 177 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 162, 25 |
Conread position: | 294-490 |
Cow position: | chr1:20799639-20799845 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 67, 157 |
Conread position: | 298-519 |
Cow position: | chr1:43358244-43358024 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 166 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 128, 78 |
Conread position: | 299-502 |
Cow position: | chr1:55705482-55705278 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 299-518 |
Cow position: | chr1:79278670-79278458 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 162 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 149, 39 |
Conread position: | 309-520 |
Cow position: | chr1:53671968-53671750 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 72, 124 |
Conread position: | 309-522 |
Cow position: | chr1:98030696-98030905 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 139, 128 |
Conread position: | 318-482 |
Cow position: | chr1:75382782-75382946 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 321-521 |
Cow position: | chr1:100393371-100393177 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 152 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 322-512 |
Cow position: | chr1:4414413-4414224 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 151 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 126, 46 |
Conread position: | 328-500 |
Cow position: | chr1:24542781-24542612 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 124, 46 |
Conread position: | 331-506 |
Cow position: | chr1:96277251-96277078 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 118, 45 |
Conread position: | 336-517 |
Cow position: | chr1:92369537-92369721 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 143 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 341-512 |
Cow position: | chr1:13810462-13810632 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 85, 106 |
Conread position: | 343-509 |
Cow position: | chr1:68763866-68763706 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 105, 33 |
Conread position: | 343-516 |
Cow position: | chr1:75933088-75933258 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 110, 33 |
Conread position: | 345-512 |
Cow position: | chr1:24445811-24445646 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 103, 24 |
Conread position: | 348-516 |
Cow position: | chr1:24581399-24581567 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 17, 126 |
Conread position: | 359-514 |
Cow position: | chr1:69127335-69127180 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 63, 33 |
Conread position: | 363-513 |
Cow position: | chr1:12978512-12978663 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 363-515 |
Cow position: | chr1:88913149-88913304 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 365-518 |
Cow position: | chr1:86110898-86110742 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 368-512 |
Cow position: | chr1:31960061-31960208 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 368-518 |
Cow position: | chr1:89508393-89508544 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 372-516 |
Cow position: | chr1:42175565-42175710 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 375-522 |
Cow position: | chr1:65909370-65909519 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 384-523 |
Cow position: | chr1:91023615-91023475 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 387-524 |
Cow position: | chr1:8129111-8128976 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 59 |
Show alignments to all cow chromosomes.