Cow genome map
Conread name: | rpigcf0_003920.y1 |
Conread position: | 217-500 |
Cow position: | chr10:37668500-37668218 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 82 |
Conread position: | 229-512 |
Cow position: | chr10:52278395-52278680 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 15 |
Conread position: | 234-510 |
Cow position: | chr10:41803223-41802949 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 66 |
Conread position: | 242-492 |
Cow position: | chr10:22390282-22390522 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 188 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 203, 17 |
Conread position: | 242-505 |
Cow position: | chr10:20896986-20897249 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 16 |
Conread position: | 242-507 |
Cow position: | chr10:10134662-10134931 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 242-523 |
Cow position: | chr10:37818874-37818593 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 16 |
Conread position: | 246-523 |
Cow position: | chr10:23056391-23056117 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 63 |
Conread position: | 251-506 |
Cow position: | chr10:51944057-51944305 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 7 |
Conread position: | 251-520 |
Cow position: | chr10:62353160-62353420 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 198 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 201, 7 |
Conread position: | 254-471 |
Cow position: | chr10:4310884-4311100 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 152, 121 |
Conread position: | 254-502 |
Cow position: | chr10:50390479-50390720 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 178, 65 |
Conread position: | 254-509 |
Cow position: | chr10:6529895-6530146 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 192 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 195, 120 |
Conread position: | 254-509 |
Cow position: | chr10:54476808-54477057 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 190 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 194, 87 |
Conread position: | 254-510 |
Cow position: | chr10:32503144-32503402 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 48 |
Conread position: | 254-510 |
Cow position: | chr10:47773430-47773679 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 14, 26 |
Conread position: | 254-512 |
Cow position: | chr10:15462191-15462441 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 109 |
Conread position: | 254-516 |
Cow position: | chr10:15294063-15294322 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 106, 54 |
Conread position: | 254-519 |
Cow position: | chr10:13368044-13368308 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 201 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 14, 123 |
Conread position: | 254-522 |
Cow position: | chr10:15818100-15817832 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 262 |
Conread position: | 254-523 |
Cow position: | chr10:31401205-31400932 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 255-522 |
Cow position: | chr10:8077455-8077183 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 183 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 256-517 |
Cow position: | chr10:7367085-7366828 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 52 |
Conread position: | 258-490 |
Cow position: | chr10:35767378-35767152 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 161, 109 |
Conread position: | 258-513 |
Cow position: | chr10:9342038-9341780 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 183 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 47, 170 |
Conread position: | 258-519 |
Cow position: | chr10:43487411-43487669 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 191 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 163, 110 |
Conread position: | 263-499 |
Cow position: | chr10:27828036-27828263 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 41, 104 |
Conread position: | 263-502 |
Cow position: | chr10:20568841-20569082 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 114, 36 |
Conread position: | 263-512 |
Cow position: | chr10:48259525-48259279 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 183 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 163, 41 |
Conread position: | 263-513 |
Cow position: | chr10:32174444-32174683 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 192 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 188, 36 |
Conread position: | 263-519 |
Cow position: | chr10:53083869-53084130 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 263-523 |
Cow position: | chr10:37528898-37528644 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 158, 13 |
Conread position: | 264-512 |
Cow position: | chr10:4994849-4994613 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 265-505 |
Cow position: | chr10:11032790-11032550 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 144, 56 |
Conread position: | 265-516 |
Cow position: | chr10:20446807-20447052 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 94 |
Conread position: | 265-519 |
Cow position: | chr10:27717131-27716884 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 190 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 182, 49 |
Conread position: | 265-520 |
Cow position: | chr10:24971889-24971653 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 193 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 183, 34 |
Conread position: | 265-520 |
Cow position: | chr10:30360237-30360478 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 188 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 265-523 |
Cow position: | chr10:21422447-21422195 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 266-490 |
Cow position: | chr10:24871596-24871818 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 57 |
Conread position: | 266-518 |
Cow position: | chr10:65803378-65803129 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 182 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 183, 114 |
Conread position: | 266-523 |
Cow position: | chr10:30523348-30523102 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 188 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 161, 33 |
Conread position: | 267-509 |
Cow position: | chr10:30352553-30352795 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 238 |
Conread position: | 267-521 |
Cow position: | chr10:37529560-37529304 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 0 |
Conread position: | 269-490 |
Cow position: | chr10:10720965-10720743 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 0 |
Conread position: | 269-493 |
Cow position: | chr10:20811886-20812111 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 269-511 |
Cow position: | chr10:22520451-22520214 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 20 |
Conread position: | 269-523 |
Cow position: | chr10:23506776-23506526 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 19, 127 |
Conread position: | 270-518 |
Cow position: | chr10:10148358-10148614 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 188 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 34, 68 |
Conread position: | 275-523 |
Cow position: | chr10:45370775-45371017 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 188 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 174, 24 |
Conread position: | 276-502 |
Cow position: | chr10:54936394-54936168 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 150, 100 |
Conread position: | 277-492 |
Cow position: | chr10:20398919-20399129 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 157 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 159, 22 |
Conread position: | 278-501 |
Cow position: | chr10:38942146-38942371 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 148, 80 |
Conread position: | 287-522 |
Cow position: | chr10:31027912-31027684 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 12 |
Conread position: | 290-516 |
Cow position: | chr10:63276123-63276348 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 176 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 137, 73 |
Conread position: | 292-510 |
Cow position: | chr10:9445279-9445064 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 156, 86 |
Conread position: | 296-520 |
Cow position: | chr10:16414850-16414625 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 22, 12 |
Conread position: | 299-510 |
Cow position: | chr10:67020368-67020576 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 148 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 149, 28 |
Conread position: | 299-518 |
Cow position: | chr10:35791674-35791888 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 150, 77 |
Conread position: | 299-520 |
Cow position: | chr10:17584288-17584079 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 151, 116 |
Conread position: | 303-523 |
Cow position: | chr10:29251907-29252128 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 309-524 |
Cow position: | chr10:50559176-50558961 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 152 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 99, 56 |
Conread position: | 321-518 |
Cow position: | chr10:60722381-60722190 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 142 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 127, 50 |
Conread position: | 322-523 |
Cow position: | chr10:37415549-37415750 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 127, 95 |
Conread position: | 326-512 |
Cow position: | chr10:6435827-6436011 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 132 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 100, 50 |
Conread position: | 338-520 |
Cow position: | chr10:3362399-3362574 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 141 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 341-492 |
Cow position: | chr10:1996882-1996729 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 123 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 353-523 |
Cow position: | chr10:35779110-35778940 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 133 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 96, 163 |
Conread position: | 363-518 |
Cow position: | chr10:24780989-24781144 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 126 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 86, 141 |
Conread position: | 370-500 |
Cow position: | chr10:4148288-4148422 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 378-502 |
Cow position: | chr10:28776171-28776292 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 71, 17 |
Conread position: | 378-519 |
Cow position: | chr10:2613183-2613325 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 71, 139 |
Conread position: | 378-519 |
Cow position: | chr10:24756233-24756373 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 71, 127 |
Conread position: | 378-520 |
Cow position: | chr10:52695912-52695769 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 385-518 |
Cow position: | chr10:37295839-37295707 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 63, 21 |
Conread position: | 388-490 |
Cow position: | chr10:35856523-35856420 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 393-512 |
Cow position: | chr10:56392443-56392322 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 58, 5 |
Show alignments to all cow chromosomes.