Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               203-518
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               220-520
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               230-506
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               233-520
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               236-396
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               238-506
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 154
               

               Conread position:
               238-512
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               241-519
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 17
               

               Conread position:
               242-502
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               242-502
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 16
               

               Conread position:
               242-509
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               242-520
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               249-500
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               251-490
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               251-511
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               254-510
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               254-512
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               254-513
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               254-513
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               254-516
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               254-519
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 16
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 45
               

               Conread position:
               255-502
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               255-517
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               258-502
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               168, 136
               

               Conread position:
               258-505
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               191, 41
               

               Conread position:
               258-519
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               260-511
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               188, 99
               

               Conread position:
               260-523
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               261-507
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               265-516
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               183, 29
               

               Conread position:
               265-523
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               265-523
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               157, 240
               

               Conread position:
               267-490
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               181, 63
               

               Conread position:
               270-523
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               271-508
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               275-512
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               276-506
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               277-490
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               171, 28
               

               Conread position:
               277-522
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               277-523
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               234, 58
               

               Conread position:
               278-509
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               27, 121
               

               Conread position:
               283-518
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 106
               

               Conread position:
               283-520
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               166, 80
               

               Conread position:
               284-512
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               142, 100
               

               Conread position:
               284-524
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               168, 85
               

               Conread position:
               287-501
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 95
               

               Conread position:
               287-507
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               287-520
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               290-490
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               137, 90
               

               Conread position:
               290-512
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               298-471
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               150, 72
               

               Conread position:
               300-516
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               152, 63
               

               Conread position:
               300-520
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               305-491
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               151
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               308-518
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               140, 60
               

               Conread position:
               318-512
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 85
               

               Conread position:
               321-490
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               321-512
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               341-522
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               351-517
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               97, 27
               

               Conread position:
               354-520
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               372-523
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               374-502
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               374-523
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               378-510
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 21
               
Show alignments to all cow chromosomes.