Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               231-520
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               242-492
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               242-506
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 16
               

               Conread position:
               242-506
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 16
               

               Conread position:
               242-509
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 16
               

               Conread position:
               242-511
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               242-516
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               244-518
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 14
               

               Conread position:
               251-505
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               251-507
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               253-505
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               253-511
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               253-513
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 115
               

               Conread position:
               253-516
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 202
               

               Conread position:
               253-519
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               168, 28
               

               Conread position:
               254-479
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               254-502
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               254-516
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               254-518
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               167, 37
               

               Conread position:
               254-519
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 232
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               254-521
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 122
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               254-524
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               255-520
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 123
               

               Conread position:
               258-419
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               258-490
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               258-511
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               169, 120
               

               Conread position:
               258-516
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               194, 69
               

               Conread position:
               258-523
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               258-523
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 67
               

               Conread position:
               258-523
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               191, 166
               

               Conread position:
               263-490
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               168, 113
               

               Conread position:
               263-506
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               186, 23
               

               Conread position:
               263-512
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               98, 36
               

               Conread position:
               265-498
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 48
               

               Conread position:
               265-515
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               186, 128
               

               Conread position:
               265-516
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               265-517
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               265-517
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 240
               

               Conread position:
               266-522
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               183, 33
               

               Conread position:
               266-523
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               155, 73
               

               Conread position:
               267-519
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               158, 64
               

               Conread position:
               267-523
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               237, 32
               

               Conread position:
               276-505
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 122
               

               Conread position:
               276-509
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               276-522
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 238
               

               Conread position:
               276-523
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               277-523
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               138, 119
               

               Conread position:
               278-508
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               171, 21
               

               Conread position:
               279-520
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               280-510
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 19
               

               Conread position:
               282-514
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               293-511
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 100
               

               Conread position:
               295-501
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               136, 68
               

               Conread position:
               302-518
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               199, 50
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               305-502
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               324-523
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               6, 194
               

               Conread position:
               325-507
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               8, 181
               

               Conread position:
               325-512
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               326-497
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               126, 62
               

               Conread position:
               327-490
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 121
               

               Conread position:
               335-519
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               342-510
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               342-512
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               343-523
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               347-520
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 47
               

               Conread position:
               353-523
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.