Cow genome map

Conread name: rpigcf0_003920.y1

Conread position: 220-518
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 38

Conread position: 237-516
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 238-508
Cow position:
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 29

Conread position: 238-513
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 187, 25

Conread position: 239-512
Cow position:
Alignm length: 280
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 147, 19

Conread position: 241-519
Cow position:
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 22

Conread position: 242-502
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 18

Conread position: 242-520
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 17

Conread position: 242-520
Cow position:
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 16

Conread position: 242-524
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 263, 16

Conread position: 244-492
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 14

Conread position: 250-492
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 25

Conread position: 251-506
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 7

Conread position: 251-511
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 7

Conread position: 251-523
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 12

Conread position: 254-490
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 162, 15

Conread position: 254-490
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 194, 185

Conread position: 254-492
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 26

Conread position: 254-500
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 195, 10

Conread position: 254-506
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 148

Conread position: 254-506
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 48

Conread position: 254-512
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 14, 48

Conread position: 254-512
Cow position:
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 254-515
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 254-519
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 14, 48

Conread position: 254-521
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 74

Conread position: 254-522
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 30

Conread position: 254-522
Cow position:
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 254-523
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 40

Conread position: 254-523
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 81

Conread position: 254-523
Cow position:
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 255-504
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 258-510
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 113

Conread position: 258-510
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 258-518
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 258-522
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 26

Conread position: 265-490
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 79, 195

Conread position: 265-506
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 266-520
Cow position:
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 114

Conread position: 267-499
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 181, 49

Conread position: 267-509
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 181, 32

Conread position: 267-512
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 103, 20

Conread position: 267-517
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 269-492
Cow position:
Alignm length: 225
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 8

Conread position: 270-492
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 180, 34

Conread position: 270-502
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 178, 104

Conread position: 270-521
Cow position:
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 17

Conread position: 270-523
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 179, 80

Conread position: 274-508
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 276-490
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 172, 45

Conread position: 276-502
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 276-513
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 48, 28

Conread position: 278-492
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 21

Conread position: 281-521
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 282-509
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 222, 96

Conread position: 291-520
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 294-493
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 190

Conread position: 296-474
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 296-522
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 131, 74

Conread position: 298-520
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 152, 80

Conread position: 300-524
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 23

Conread position: 302-517
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 309-518
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 313-518
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 315-522
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 121, 61

Conread position: 334-511
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 81

Conread position: 338-513
Cow position:
Alignm length: 180
Alignm identity: 147
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 344-520
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 24

Conread position: 396-520
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 398-520
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 118

Show alignments to all cow chromosomes.