Cow genome map
Conread name: | rpigcf0_003920.y1 |
Conread position: | 200-511 |
Cow position: | chr23:2259929-2259621 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 227-512 |
Cow position: | chr23:19538295-19538019 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 195 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 242-506 |
Cow position: | chr23:26319129-26319389 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 164, 33 |
Conread position: | 242-513 |
Cow position: | chr23:24509414-24509677 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 16 |
Conread position: | 251-492 |
Cow position: | chr23:1878151-1877916 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 251-507 |
Cow position: | chr23:16563558-16563814 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 118 |
Conread position: | 253-502 |
Cow position: | chr23:41285650-41285884 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 253-508 |
Cow position: | chr23:15710356-15710097 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 185 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 27, 51 |
Conread position: | 254-389 |
Cow position: | chr23:13674195-13674063 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 254-488 |
Cow position: | chr23:41220514-41220267 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 171 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 254-502 |
Cow position: | chr23:7392564-7392324 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 15, 100 |
Conread position: | 254-516 |
Cow position: | chr23:406439-406191 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 15, 63 |
Conread position: | 254-516 |
Cow position: | chr23:7845008-7845278 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 254-518 |
Cow position: | chr23:1700641-1700888 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 196 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 254-519 |
Cow position: | chr23:7175342-7175601 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 122 |
Conread position: | 254-519 |
Cow position: | chr23:8959318-8959579 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 200 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 14, 57 |
Conread position: | 254-520 |
Cow position: | chr23:533952-534214 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 45 |
Conread position: | 254-522 |
Cow position: | chr23:7750910-7751170 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 185 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 80 |
Conread position: | 258-511 |
Cow position: | chr23:13511459-13511711 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 258-523 |
Cow position: | chr23:14191278-14191541 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 19 |
Conread position: | 261-512 |
Cow position: | chr23:21453004-21452753 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 117 |
Conread position: | 263-518 |
Cow position: | chr23:5539913-5540145 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 188 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 14, 22 |
Conread position: | 265-506 |
Cow position: | chr23:3918365-3918126 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 153, 113 |
Conread position: | 265-510 |
Cow position: | chr23:344445-344199 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 0 |
Conread position: | 265-523 |
Cow position: | chr23:38455452-38455192 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 162, 82 |
Conread position: | 266-523 |
Cow position: | chr23:5162162-5162420 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 33, 114 |
Conread position: | 267-509 |
Cow position: | chr23:17404587-17404813 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 168 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 182, 41 |
Conread position: | 267-522 |
Cow position: | chr23:16881422-16881177 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 75 |
Conread position: | 270-513 |
Cow position: | chr23:3727663-3727418 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 185 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 162, 29 |
Conread position: | 273-511 |
Cow position: | chr23:2282433-2282198 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 64 |
Conread position: | 276-521 |
Cow position: | chr23:15056897-15056656 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 172, 23 |
Conread position: | 279-511 |
Cow position: | chr23:29034060-29034293 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 280-524 |
Cow position: | chr23:39806621-39806861 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 90, 19 |
Conread position: | 283-505 |
Cow position: | chr23:615165-614932 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 165 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 31, 58 |
Conread position: | 292-511 |
Cow position: | chr23:40891122-40891336 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 158, 7 |
Conread position: | 295-490 |
Cow position: | chr23:27544595-27544784 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 150 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 153, 83 |
Conread position: | 313-492 |
Cow position: | chr23:12290063-12290241 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 113, 38 |
Conread position: | 318-521 |
Cow position: | chr23:18902265-18902063 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 155 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 131, 185 |
Conread position: | 321-507 |
Cow position: | chr23:21764706-21764890 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 148 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 128, 71 |
Conread position: | 325-513 |
Cow position: | chr23:1776838-1776655 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 149 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 125, 44 |
Conread position: | 330-519 |
Cow position: | chr23:16631062-16631252 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 147 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 94, 112 |
Conread position: | 366-511 |
Cow position: | chr23:4959734-4959589 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 107 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 83, 137 |
Conread position: | 378-512 |
Cow position: | chr23:18416206-18416069 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 378-520 |
Cow position: | chr23:16664724-16664586 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 118, 74 |
Conread position: | 384-502 |
Cow position: | chr23:21502789-21502672 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 393-510 |
Cow position: | chr23:12363761-12363643 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 405-523 |
Cow position: | chr23:5795347-5795466 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.