Cow genome map

Conread name: rpigcf0_003920.y1

Conread position: 200-511
Cow position: chr23:2259929-2259621 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 13

Conread position: 227-512
Cow position: chr23:19538295-19538019 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 242-506
Cow position: chr23:26319129-26319389 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 33

Conread position: 242-513
Cow position: chr23:24509414-24509677 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 16

Conread position: 251-492
Cow position: chr23:1878151-1877916 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 251-507
Cow position: chr23:16563558-16563814 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 118

Conread position: 253-502
Cow position: chr23:41285650-41285884 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 253-508
Cow position: chr23:15710356-15710097 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 51

Conread position: 254-389
Cow position: chr23:13674195-13674063 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 254-488
Cow position: chr23:41220514-41220267 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 254-502
Cow position: chr23:7392564-7392324 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 100

Conread position: 254-516
Cow position: chr23:406439-406191 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 15, 63

Conread position: 254-516
Cow position: chr23:7845008-7845278 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 254-518
Cow position: chr23:1700641-1700888 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 254-519
Cow position: chr23:7175342-7175601 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 122

Conread position: 254-519
Cow position: chr23:8959318-8959579 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 57

Conread position: 254-520
Cow position: chr23:533952-534214 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 45

Conread position: 254-522
Cow position: chr23:7750910-7751170 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 80

Conread position: 258-511
Cow position: chr23:13511459-13511711 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 258-523
Cow position: chr23:14191278-14191541 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 19

Conread position: 261-512
Cow position: chr23:21453004-21452753 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 117

Conread position: 263-518
Cow position: chr23:5539913-5540145 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 22

Conread position: 265-506
Cow position: chr23:3918365-3918126 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 153, 113

Conread position: 265-510
Cow position: chr23:344445-344199 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 0

Conread position: 265-523
Cow position: chr23:38455452-38455192 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 162, 82

Conread position: 266-523
Cow position: chr23:5162162-5162420 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 33, 114

Conread position: 267-509
Cow position: chr23:17404587-17404813 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 41

Conread position: 267-522
Cow position: chr23:16881422-16881177 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 75

Conread position: 270-513
Cow position: chr23:3727663-3727418 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 162, 29

Conread position: 273-511
Cow position: chr23:2282433-2282198 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 64

Conread position: 276-521
Cow position: chr23:15056897-15056656 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 172, 23

Conread position: 279-511
Cow position: chr23:29034060-29034293 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 280-524
Cow position: chr23:39806621-39806861 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 90, 19

Conread position: 283-505
Cow position: chr23:615165-614932 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 58

Conread position: 292-511
Cow position: chr23:40891122-40891336 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 158, 7

Conread position: 295-490
Cow position: chr23:27544595-27544784 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 153, 83

Conread position: 313-492
Cow position: chr23:12290063-12290241 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 38

Conread position: 318-521
Cow position: chr23:18902265-18902063 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 131, 185

Conread position: 321-507
Cow position: chr23:21764706-21764890 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 128, 71

Conread position: 325-513
Cow position: chr23:1776838-1776655 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 125, 44

Conread position: 330-519
Cow position: chr23:16631062-16631252 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 94, 112

Conread position: 366-511
Cow position: chr23:4959734-4959589 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 137

Conread position: 378-512
Cow position: chr23:18416206-18416069 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 378-520
Cow position: chr23:16664724-16664586 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 74

Conread position: 384-502
Cow position: chr23:21502789-21502672 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 393-510
Cow position: chr23:12363761-12363643 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 405-523
Cow position: chr23:5795347-5795466 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.