Cow genome map
| Conread name: | rpigcf0_003920.y1 |
| Conread position: | 220-491 |
| Cow position: | chr25:26757122-26757389 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 234-512 |
| Cow position: | chr25:22297320-22297045 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 242-501 |
| Cow position: | chr25:12204177-12204432 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 185, 18 |
| Conread position: | 246-515 |
| Cow position: | chr25:20785872-20785606 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 253-486 |
| Cow position: | chr25:1735596-1735366 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 253-518 |
| Cow position: | chr25:8120491-8120760 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 254-502 |
| Cow position: | chr25:11662100-11661853 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 15 |
| Conread position: | 254-517 |
| Cow position: | chr25:23829399-23829152 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 254-518 |
| Cow position: | chr25:8347224-8347488 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 254-521 |
| Cow position: | chr25:7641738-7641469 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 255-490 |
| Cow position: | chr25:12824297-12824068 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 121 |
| Conread position: | 258-522 |
| Cow position: | chr25:22314923-22315182 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 258-523 |
| Cow position: | chr25:7216547-7216814 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 261-524 |
| Cow position: | chr25:9957307-9957054 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 166, 102 |
| Conread position: | 262-513 |
| Cow position: | chr25:4522091-4521859 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 234, 41 |
| Conread position: | 265-490 |
| Cow position: | chr25:6474371-6474145 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 265-502 |
| Cow position: | chr25:40957257-40957024 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 184, 39 |
| Conread position: | 265-512 |
| Cow position: | chr25:20394936-20395169 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 183, 26 |
| Conread position: | 266-523 |
| Cow position: | chr25:36081605-36081859 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 16 |
| Conread position: | 268-523 |
| Cow position: | chr25:41384350-41384098 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 180, 93 |
| Conread position: | 269-499 |
| Cow position: | chr25:40388721-40388504 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 269-519 |
| Cow position: | chr25:6886244-6885993 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 157, 88 |
| Conread position: | 270-523 |
| Cow position: | chr25:28188216-28187962 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 273-512 |
| Cow position: | chr25:12778797-12778561 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 181 |
| Conread position: | 276-492 |
| Cow position: | chr25:19679082-19679297 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 277-513 |
| Cow position: | chr25:33550247-33550483 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 36 |
| Conread position: | 277-518 |
| Cow position: | chr25:32191412-32191648 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 216, 44 |
| Conread position: | 278-523 |
| Cow position: | chr25:16001779-16001543 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 297-511 |
| Cow position: | chr25:36779256-36779469 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 308-512 |
| Cow position: | chr25:10218279-10218072 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 309-523 |
| Cow position: | chr25:36033209-36033422 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 141, 87 |
| Conread position: | 336-517 |
| Cow position: | chr25:38569666-38569488 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 56 |
| Conread position: | 342-520 |
| Cow position: | chr25:7750256-7750431 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 347-510 |
| Cow position: | chr25:18905692-18905857 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 378-501 |
| Cow position: | chr25:26679066-26679190 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 390-513 |
| Cow position: | chr25:21668096-21668219 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 115 |
| Conread position: | 407-518 |
| Cow position: | chr25:7449675-7449787 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 32 |
Show alignments to all cow chromosomes.