Cow genome map
| Conread name: | rpigcf0_003920.y1 |
| Conread position: | 242-512 |
| Cow position: | chr29:10456844-10456585 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 206, 16 |
| Conread position: | 242-512 |
| Cow position: | chr29:39567394-39567663 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 251-490 |
| Cow position: | chr29:27007836-27008068 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 180, 7 |
| Conread position: | 253-517 |
| Cow position: | chr29:29974758-29975024 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 254-498 |
| Cow position: | chr29:29589198-29588955 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 85, 196 |
| Conread position: | 254-505 |
| Cow position: | chr29:12798648-12798887 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 254-511 |
| Cow position: | chr29:34745938-34745688 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 254-513 |
| Cow position: | chr29:9709415-9709672 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 254-516 |
| Cow position: | chr29:4480458-4480194 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 254-516 |
| Cow position: | chr29:36216835-36217095 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 256-512 |
| Cow position: | chr29:19428389-19428636 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 171, 48 |
| Conread position: | 258-374 |
| Cow position: | chr29:33392291-33392411 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 258-498 |
| Cow position: | chr29:39111585-39111355 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 191, 90 |
| Conread position: | 258-506 |
| Cow position: | chr29:7408166-7407920 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 258-517 |
| Cow position: | chr29:45650622-45650363 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 259-512 |
| Cow position: | chr29:12451095-12451351 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 263-520 |
| Cow position: | chr29:26616001-26615741 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 125 |
| Conread position: | 265-520 |
| Cow position: | chr29:36530593-36530846 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 208 |
| Conread position: | 266-490 |
| Cow position: | chr29:19338710-19338939 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 146, 163 |
| Conread position: | 267-516 |
| Cow position: | chr29:12679886-12680136 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 269-490 |
| Cow position: | chr29:94811-94602 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 156, 39 |
| Conread position: | 272-520 |
| Cow position: | chr29:42848964-42849204 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 179, 95 |
| Conread position: | 276-501 |
| Cow position: | chr29:19389227-19389450 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 63 |
| Conread position: | 276-504 |
| Cow position: | chr29:4804974-4805198 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 145, 107 |
| Conread position: | 279-507 |
| Cow position: | chr29:22613179-22613395 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 169, 20 |
| Conread position: | 281-506 |
| Cow position: | chr29:13553878-13554103 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 284-511 |
| Cow position: | chr29:11787541-11787769 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 288-499 |
| Cow position: | chr29:6472070-6472276 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 290-519 |
| Cow position: | chr29:3502311-3502549 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 165 |
| Conread position: | 299-523 |
| Cow position: | chr29:22714964-22714740 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 150, 195 |
| Conread position: | 300-523 |
| Cow position: | chr29:24103784-24103561 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 184 |
| Conread position: | 302-501 |
| Cow position: | chr29:19254056-19253857 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 74 |
| Conread position: | 303-511 |
| Cow position: | chr29:43495827-43496024 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 327-522 |
| Cow position: | chr29:709331-709134 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 42 |
| Conread position: | 330-511 |
| Cow position: | chr29:10818642-10818461 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 333-511 |
| Cow position: | chr29:43009287-43009107 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 116, 56 |
| Conread position: | 337-494 |
| Cow position: | chr29:26508288-26508449 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 24 |
| Conread position: | 356-516 |
| Cow position: | chr29:43099925-43099769 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 40 |
| Conread position: | 368-523 |
| Cow position: | chr29:23244051-23243895 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 383-523 |
| Cow position: | chr29:12025627-12025485 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 135 |
Show alignments to all cow chromosomes.