Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               219-506
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               219-511
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               222-501
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               238-512
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               241-479
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               242-507
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               242-509
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               242-518
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               242-518
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               251-490
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               197, 7
               

               Conread position:
               251-510
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               17, 111
               

               Conread position:
               252-523
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               253-513
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               254-472
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               194, 122
               

               Conread position:
               254-490
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               23, 124
               

               Conread position:
               254-499
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               254-509
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               254-510
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               254-516
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               254-518
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 206
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 215
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               254-521
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 249
               

               Conread position:
               254-522
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               254-522
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               254-524
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 45
               

               Conread position:
               255-492
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               194, 44
               

               Conread position:
               258-492
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               258-497
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               170, 29
               

               Conread position:
               258-502
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               258-512
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               258-513
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               137, 54
               

               Conread position:
               258-523
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 41
               

               Conread position:
               262-502
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               159, 188
               

               Conread position:
               265-474
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               265-511
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               265-521
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               40, 240
               

               Conread position:
               266-501
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               266-508
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 100
               

               Conread position:
               266-516
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 102
               

               Conread position:
               267-507
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               160, 109
               

               Conread position:
               267-523
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               270-521
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 112
               

               Conread position:
               272-507
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 114
               

               Conread position:
               272-523
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 182
               

               Conread position:
               273-502
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               175, 105
               

               Conread position:
               276-510
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               276-521
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               238, 23
               

               Conread position:
               276-523
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               173, 22
               

               Conread position:
               277-507
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               171, 91
               

               Conread position:
               277-512
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 119
               

               Conread position:
               277-523
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               173, 30
               

               Conread position:
               278-512
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               280-518
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               282-502
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               283-510
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 29
               

               Conread position:
               287-516
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               206, 94
               

               Conread position:
               290-506
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               302-519
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               308-520
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               308-523
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               140, 51
               

               Conread position:
               309-523
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               181, 57
               

               Conread position:
               321-512
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               322-517
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               325-512
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               328-522
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               331-518
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               118, 47
               

               Conread position:
               341-523
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               342-509
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 164
               

               Conread position:
               342-516
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               357-519
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 141
               

               Conread position:
               368-523
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 149
               

               Conread position:
               378-509
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               383-492
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               383-511
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               383-518
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               384-502
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               393-513
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.