Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               231-518
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               237-499
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               242-458
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               206, 16
               

               Conread position:
               242-505
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               242-512
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               246-518
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               251-502
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               251-512
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 135
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               252-484
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               175, 7
               

               Conread position:
               253-490
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               199, 115
               

               Conread position:
               253-523
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               254-498
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               254-507
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               254-507
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               194, 45
               

               Conread position:
               254-512
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               254-513
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               152, 45
               

               Conread position:
               254-518
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               254-519
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               255-468
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               258-482
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 125
               

               Conread position:
               258-510
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 119
               

               Conread position:
               258-515
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 254
               

               Conread position:
               258-517
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               258-519
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               262-519
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               263-493
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               263-512
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 115
               

               Conread position:
               265-510
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 109
               

               Conread position:
               265-512
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 178
               

               Conread position:
               265-518
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               266-500
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 33
               

               Conread position:
               266-518
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 33
               

               Conread position:
               266-518
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 48
               

               Conread position:
               267-502
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               267-512
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 92
               

               Conread position:
               273-513
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               148, 103
               

               Conread position:
               273-523
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 179
               

               Conread position:
               275-501
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               178, 24
               

               Conread position:
               277-506
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               277-513
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               278-507
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               172, 43
               

               Conread position:
               281-493
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               281-520
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               287-519
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               290-523
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               158, 90
               

               Conread position:
               291-518
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               79, 118
               

               Conread position:
               297-492
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 65
               

               Conread position:
               301-511
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               144, 76
               

               Conread position:
               321-523
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               322-524
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               325-519
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               333-524
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               336-520
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               112, 167
               

               Conread position:
               341-505
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               108, 37
               

               Conread position:
               345-495
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               377-511
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 37
               
Show alignments to all cow chromosomes.