Cow genome map
| Conread name: | rpigcf0_003920.y1 |
| Conread position: | 219-498 |
| Cow position: | chr7:14076544-14076271 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 48, 168 |
| Conread position: | 233-512 |
| Cow position: | chr7:56887037-56886767 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 213, 25 |
| Conread position: | 242-492 |
| Cow position: | chr7:32819563-32819813 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 16 |
| Conread position: | 245-471 |
| Cow position: | chr7:40070197-40070413 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 250-521 |
| Cow position: | chr7:45331300-45331568 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 192 |
| Conread position: | 253-512 |
| Cow position: | chr7:23679834-23679574 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 253-513 |
| Cow position: | chr7:32894495-32894226 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 189 |
| Conread position: | 253-516 |
| Cow position: | chr7:62193325-62193588 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 51 |
| Conread position: | 254-498 |
| Cow position: | chr7:53992461-53992703 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 254-501 |
| Cow position: | chr7:9193481-9193237 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 174, 112 |
| Conread position: | 254-505 |
| Cow position: | chr7:37361643-37361891 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 254-506 |
| Cow position: | chr7:4452361-4452615 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 254-508 |
| Cow position: | chr7:14536509-14536267 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 254-512 |
| Cow position: | chr7:26632052-26631792 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 254-512 |
| Cow position: | chr7:34979139-34979401 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 254-520 |
| Cow position: | chr7:49106440-49106176 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 124 |
| Conread position: | 254-523 |
| Cow position: | chr7:35275309-35275051 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 45 |
| Conread position: | 254-523 |
| Cow position: | chr7:60483663-60483399 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 118 |
| Conread position: | 255-517 |
| Cow position: | chr7:40074454-40074697 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 255-518 |
| Cow position: | chr7:40008581-40008844 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 121 |
| Conread position: | 258-507 |
| Cow position: | chr7:53772548-53772318 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 190, 74 |
| Conread position: | 258-512 |
| Cow position: | chr7:39325509-39325750 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 258-518 |
| Cow position: | chr7:27079400-27079649 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 191, 41 |
| Conread position: | 258-518 |
| Cow position: | chr7:38081922-38082181 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 110 |
| Conread position: | 260-511 |
| Cow position: | chr7:31315088-31315329 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 262-518 |
| Cow position: | chr7:56820799-56820550 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 13 |
| Conread position: | 263-520 |
| Cow position: | chr7:26771655-26771894 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 263-522 |
| Cow position: | chr7:40067429-40067687 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 164, 107 |
| Conread position: | 264-523 |
| Cow position: | chr7:34412518-34412247 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 265-509 |
| Cow position: | chr7:14542278-14542042 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 183, 47 |
| Conread position: | 265-517 |
| Cow position: | chr7:23619312-23619063 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 187, 111 |
| Conread position: | 265-517 |
| Cow position: | chr7:32914885-32915131 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 34 |
| Conread position: | 265-518 |
| Cow position: | chr7:31094571-31094326 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 180, 70 |
| Conread position: | 265-519 |
| Cow position: | chr7:64229120-64228870 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 161, 10 |
| Conread position: | 265-520 |
| Cow position: | chr7:39415678-39415933 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 199 |
| Conread position: | 265-521 |
| Cow position: | chr7:9080148-9080402 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 157, 153 |
| Conread position: | 265-521 |
| Cow position: | chr7:48243452-48243697 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 44 |
| Conread position: | 266-523 |
| Cow position: | chr7:600118-600362 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 182, 42 |
| Conread position: | 267-490 |
| Cow position: | chr7:147186-147407 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 267-507 |
| Cow position: | chr7:17713689-17713460 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 186, 15 |
| Conread position: | 267-523 |
| Cow position: | chr7:23935891-23936139 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 181, 32 |
| Conread position: | 269-500 |
| Cow position: | chr7:28584026-28584252 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 99 |
| Conread position: | 269-502 |
| Cow position: | chr7:66748747-66748517 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 91 |
| Conread position: | 270-512 |
| Cow position: | chr7:65122122-65122360 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 155, 29 |
| Conread position: | 276-523 |
| Cow position: | chr7:51319584-51319827 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 32 |
| Conread position: | 278-523 |
| Cow position: | chr7:53053620-53053377 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 167 |
| Conread position: | 279-499 |
| Cow position: | chr7:57161936-57162156 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 147, 89 |
| Conread position: | 280-520 |
| Cow position: | chr7:5913991-5914226 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 183 |
| Conread position: | 282-518 |
| Cow position: | chr7:41315648-41315412 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 170 |
| Conread position: | 282-523 |
| Cow position: | chr7:67816698-67816930 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 283-517 |
| Cow position: | chr7:10450201-10449960 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 286-506 |
| Cow position: | chr7:45709414-45709192 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 286-523 |
| Cow position: | chr7:9939-10172 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 8 |
| Conread position: | 289-511 |
| Cow position: | chr7:68170804-68170589 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 290-510 |
| Cow position: | chr7:23131395-23131613 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 290-512 |
| Cow position: | chr7:38696646-38696864 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 137, 78 |
| Conread position: | 290-513 |
| Cow position: | chr7:28916885-28917111 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 291-519 |
| Cow position: | chr7:43881877-43882103 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 135, 85 |
| Conread position: | 293-523 |
| Cow position: | chr7:40121267-40121493 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 295-515 |
| Cow position: | chr7:59168081-59168293 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 296-502 |
| Cow position: | chr7:6745005-6745212 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 130, 96 |
| Conread position: | 296-520 |
| Cow position: | chr7:68050902-68051129 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 298-518 |
| Cow position: | chr7:14174602-14174392 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 301-508 |
| Cow position: | chr7:32079268-32079463 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 67 |
| Conread position: | 301-520 |
| Cow position: | chr7:48714657-48714877 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 302-523 |
| Cow position: | chr7:41328228-41328012 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 314-511 |
| Cow position: | chr7:4840630-4840829 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 317-523 |
| Cow position: | chr7:32372684-32372887 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 131, 59 |
| Conread position: | 322-506 |
| Cow position: | chr7:29479352-29479537 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 325-506 |
| Cow position: | chr7:20168387-20168558 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 329-520 |
| Cow position: | chr7:37394154-37394338 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 164, 49 |
| Conread position: | 330-521 |
| Cow position: | chr7:21565712-21565535 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 333-510 |
| Cow position: | chr7:6820729-6820915 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 333-521 |
| Cow position: | chr7:52680680-52680869 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 335-520 |
| Cow position: | chr7:30816443-30816263 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 341-523 |
| Cow position: | chr7:47937073-47936890 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 81, 174 |
| Conread position: | 342-490 |
| Cow position: | chr7:27359624-27359480 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 348-502 |
| Cow position: | chr7:47172853-47172701 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 348-520 |
| Cow position: | chr7:42593417-42593255 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 371-513 |
| Cow position: | chr7:49417479-49417623 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 372-523 |
| Cow position: | chr7:18188345-18188198 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 131, 80 |
| Conread position: | 378-523 |
| Cow position: | chr7:13296136-13295988 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 383-521 |
| Cow position: | chr7:14353902-14353759 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 388-516 |
| Cow position: | chr7:42636873-42637001 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 115 |
| Conread position: | 420-520 |
| Cow position: | chr7:60732715-60732613 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.