Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               226-523
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               229-492
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 29
               

               Conread position:
               251-501
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               170, 7
               

               Conread position:
               251-509
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               251-521
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 186
               

               Conread position:
               251-522
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               251-523
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 48
               

               Conread position:
               254-492
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               254-502
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               254-505
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 48
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 98
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 12
               

               Conread position:
               254-522
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 114
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               258-492
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               258-510
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               163, 107
               

               Conread position:
               258-518
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               238, 47
               

               Conread position:
               258-520
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               190, 113
               

               Conread position:
               258-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 125
               

               Conread position:
               263-510
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               263-517
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 36
               

               Conread position:
               265-464
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               97, 134
               

               Conread position:
               265-502
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               265-513
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               265-516
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               265-516
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               265-520
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 195
               

               Conread position:
               265-521
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               157, 145
               

               Conread position:
               266-489
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               182, 75
               

               Conread position:
               266-512
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               183, 127
               

               Conread position:
               266-513
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               161, 110
               

               Conread position:
               266-523
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               161, 110
               

               Conread position:
               266-523
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               267-505
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               267-512
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               267-516
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               267-519
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               159, 109
               

               Conread position:
               268-510
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               159, 40
               

               Conread position:
               268-521
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 236
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 108
               

               Conread position:
               269-513
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 50
               

               Conread position:
               270-506
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               178, 90
               

               Conread position:
               271-517
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               178, 28
               

               Conread position:
               273-501
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               276-518
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               276-520
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 241
               

               Conread position:
               278-498
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 85
               

               Conread position:
               278-511
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               278-516
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               174, 85
               

               Conread position:
               279-519
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               147, 97
               

               Conread position:
               279-522
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               149, 77
               

               Conread position:
               283-502
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               165, 115
               

               Conread position:
               285-517
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               164, 97
               

               Conread position:
               287-489
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               135, 80
               

               Conread position:
               290-523
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               294-505
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               299-510
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               299-514
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               128, 58
               

               Conread position:
               300-523
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               148, 105
               

               Conread position:
               303-518
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               146, 73
               

               Conread position:
               309-521
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               140, 26
               

               Conread position:
               315-523
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 188
               

               Conread position:
               318-512
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 68
               

               Conread position:
               320-510
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               324-516
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               325-520
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               328-523
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               341-523
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               111, 162
               

               Conread position:
               342-519
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               343-511
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 95
               

               Conread position:
               346-512
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               349-524
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               351-516
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               362-523
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               380-524
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               393-506
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.