Cow genome map


           Conread name:
           rpigcf0_003920.y1
        

               Conread position:
               223-512
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               232-518
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               234-518
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               242-501
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               242-502
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 16
               

               Conread position:
               242-508
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               242-512
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               163, 16
               

               Conread position:
               242-513
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               210, 16
               

               Conread position:
               250-510
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               251-498
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 7
               

               Conread position:
               251-500
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               158, 7
               

               Conread position:
               251-509
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 7
               

               Conread position:
               251-516
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               251-521
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               252-501
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 122
               

               Conread position:
               253-512
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 254
               

               Conread position:
               253-521
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               254-468
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               171, 38
               

               Conread position:
               254-492
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               254-501
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               173, 124
               

               Conread position:
               254-510
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               254-512
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               254-516
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               254-520
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               16, 115
               

               Conread position:
               254-523
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               256-512
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               193, 43
               

               Conread position:
               258-490
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               191, 75
               

               Conread position:
               258-502
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               190, 47
               

               Conread position:
               258-522
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               259-524
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               263-492
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               263-501
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               265-502
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               265-502
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 61
               

               Conread position:
               265-523
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               183, 124
               

               Conread position:
               266-523
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               156, 102
               

               Conread position:
               267-512
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               267-523
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               269-521
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               224, 17
               

               Conread position:
               270-490
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               161, 29
               

               Conread position:
               271-523
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               178, 28
               

               Conread position:
               276-476
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               108, 103
               

               Conread position:
               277-524
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               166, 99
               

               Conread position:
               279-511
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 61
               

               Conread position:
               284-516
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               294-513
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               295-520
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               296-493
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               299-500
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               149, 72
               

               Conread position:
               301-490
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               303-490
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 75
               

               Conread position:
               314-507
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               316-502
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 88
               

               Conread position:
               339-502
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               340-516
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 154
               

               Conread position:
               353-492
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               368-502
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               370-492
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               374-520
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               388-511
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 10
               
Show alignments to all cow chromosomes.