Cow genome map

Conread name: rpigcf0_004127.y1

Conread position: 1-212
Cow position: chr15:33455055-33455267 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 59

Conread position: 1-251
Cow position: chr15:461639-461896 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 59

Conread position: 1-267
Cow position: chr15:23797771-23798051 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 60

Conread position: 1-271
Cow position: chr15:44666567-44666288 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 48

Conread position: 1-274
Cow position: chr15:4917831-4918111 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 63

Conread position: 1-306
Cow position: chr15:502956-503267 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 19

Conread position: 1-315
Cow position: chr15:2795839-2796157 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 98, 59

Conread position: 1-329
Cow position: chr15:32858510-32858843 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 98, 59

Conread position: 1-350
Cow position: chr15:42943962-42943613 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-354
Cow position: chr15:4380678-4380322 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-358
Cow position: chr15:6762452-6762089 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-358
Cow position: chr15:32647004-32647365 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-373
Cow position: chr15:2898346-2897979 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 59

Conread position: 1-373
Cow position: chr15:49242672-49242293 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-374
Cow position: chr15:7547514-7547890 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 52

Conread position: 1-380
Cow position: chr15:18229709-18230093 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-391
Cow position: chr15:46105871-46106266 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 247
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 62

Conread position: 1-401
Cow position: chr15:31585754-31585348 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-418
Cow position: chr15:17123248-17123667 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 51

Conread position: 1-420
Cow position: chr15:2633065-2632639 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-420
Cow position: chr15:6081346-6081762 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 16

Conread position: 1-420
Cow position: chr15:13430468-13430889 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 59

Conread position: 1-423
Cow position: chr15:4081646-4082073 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-423
Cow position: chr15:13286458-13286034 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-423
Cow position: chr15:37373480-37373055 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-434
Cow position: chr15:5196999-5197433 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 39

Conread position: 1-435
Cow position: chr15:45113254-45112809 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 293
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 59

Conread position: 1-438
Cow position: chr15:15263034-15262613 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 59

Conread position: 1-442
Cow position: chr15:32491244-32490799 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-444
Cow position: chr15:4673977-4674425 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-445
Cow position: chr15:24090472-24090922 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-446
Cow position: chr15:24047912-24048375 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-457
Cow position: chr15:2664032-2664492 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-461
Cow position: chr15:2019933-2020381 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 139, 29

Conread position: 1-468
Cow position: chr15:28487484-28487018 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-468
Cow position: chr15:34063595-34064070 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-469
Cow position: chr15:5497705-5498172 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-472
Cow position: chr15:6330778-6331237 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 1-473
Cow position: chr15:51220386-51220867 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-475
Cow position: chr15:4641847-4642324 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-475
Cow position: chr15:9522558-9522075 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 67

Conread position: 1-475
Cow position: chr15:20413219-20413698 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-475
Cow position: chr15:32702085-32701614 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-475
Cow position: chr15:39446657-39446180 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 313
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 80, 65

Conread position: 1-476
Cow position: chr15:313156-312674 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-476
Cow position: chr15:20329755-20329300 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 92, 56

Conread position: 1-476
Cow position: chr15:20457971-20458455 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 65

Conread position: 1-476
Cow position: chr15:31270227-31269749 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:3257864-3257389 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:4388391-4388873 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:7840978-7841445 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 1-477
Cow position: chr15:18579370-18579848 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:21663098-21662618 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:21825509-21825992 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 1-477
Cow position: chr15:35750651-35750171 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr15:42939560-42940036 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-482
Cow position: chr15:14573659-14573189 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 63

Conread position: 1-486
Cow position: chr15:33305142-33304660 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 59

Conread position: 1-486
Cow position: chr15:49448517-49448022 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 315
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 67

Conread position: 1-487
Cow position: chr15:18019737-18019251 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 25

Conread position: 1-487
Cow position: chr15:23274932-23274465 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 1-487
Cow position: chr15:53185812-53186301 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 320
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 6

Conread position: 1-488
Cow position: chr15:29664-29172 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-488
Cow position: chr15:60277-60753 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:67915-67430 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 53

Conread position: 1-488
Cow position: chr15:1774090-1774580 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:1785410-1785902 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:2644702-2644212 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:3008194-3007703 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 58

Conread position: 1-488
Cow position: chr15:4140265-4139772 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:4213813-4214296 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:4828983-4829471 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 47

Conread position: 1-488
Cow position: chr15:4952971-4953458 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:5640948-5640455 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:6164447-6163967 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-488
Cow position: chr15:6616442-6616934 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:7267243-7267737 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:7565647-7566137 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:7587137-7586651 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:7985786-7985291 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:11628047-11628538 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:12858786-12859277 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:16800918-16801410 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:18265117-18264624 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:21636915-21637408 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:21806493-21806985 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:22540173-22539702 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 59

Conread position: 1-488
Cow position: chr15:22760345-22759866 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 1-488
Cow position: chr15:23666850-23666358 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:23773950-23774431 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-488
Cow position: chr15:24043426-24043892 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 330
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 59

Conread position: 1-488
Cow position: chr15:25069850-25069358 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:25132601-25133098 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:26591702-26591211 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-488
Cow position: chr15:33753636-33753146 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:36329816-36329324 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:36940738-36940247 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:38983304-38983810 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 1-488
Cow position: chr15:44298214-44297730 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 29

Conread position: 1-488
Cow position: chr15:50151344-50151835 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr15:51910890-51910402 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 1-489
Cow position: chr15:1082091-1082575 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 52

Conread position: 1-489
Cow position: chr15:4788154-4787663 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 62

Conread position: 1-489
Cow position: chr15:10477478-10476991 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 1-489
Cow position: chr15:15864895-15865369 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 319
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 93, 59

Conread position: 1-489
Cow position: chr15:26932686-26933180 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-489
Cow position: chr15:30045043-30045545 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 1-490
Cow position: chr15:2670639-2670160 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 54

Conread position: 1-490
Cow position: chr15:2927898-2928396 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 1-490
Cow position: chr15:4815204-4815683 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 58

Conread position: 1-490
Cow position: chr15:4895726-4895253 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 336
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position: chr15:6043269-6043739 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:6463719-6464204 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:7319212-7319705 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 48

Conread position: 1-490
Cow position: chr15:7941070-7941556 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-490
Cow position: chr15:8029364-8028874 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:8102100-8102582 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:15344459-15343968 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:16514838-16515343 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:17034987-17034494 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 1-490
Cow position: chr15:19735155-19734659 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:24097251-24097734 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 1-490
Cow position: chr15:24796514-24796981 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:27747876-27747378 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position: chr15:35643807-35643321 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:40344606-40344113 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr15:45244238-45244732 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 1-490
Cow position: chr15:47201922-47201435 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 1-491
Cow position: chr15:2617426-2616937 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr15:6589288-6588794 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr15:16787987-16787505 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 59

Conread position: 1-491
Cow position: chr15:35404619-35405111 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr15:50345086-50344595 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 40

Conread position: 1-493
Cow position: chr15:17267158-17267658 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 2-327
Cow position: chr15:13680022-13680352 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 57

Conread position: 2-349
Cow position: chr15:19724419-19724768 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 24

Conread position: 2-456
Cow position: chr15:21366974-21366500 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 56

Conread position: 2-476
Cow position: chr15:4077484-4077008 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-488
Cow position: chr15:481229-481715 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-488
Cow position: chr15:9736085-9735589 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 321
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 58

Conread position: 2-490
Cow position: chr15:5002806-5002313 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-490
Cow position: chr15:23173423-23172941 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 58

Conread position: 3-322
Cow position: chr15:10569337-10569648 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 57

Conread position: 3-335
Cow position: chr15:32697395-32697731 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 96, 60

Conread position: 3-340
Cow position: chr15:6482138-6482469 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 176, 57

Conread position: 3-373
Cow position: chr15:7058373-7058741 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-422
Cow position: chr15:38937431-38937837 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 57

Conread position: 3-469
Cow position: chr15:33527917-33527451 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-475
Cow position: chr15:33229408-33228931 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 231

Conread position: 3-480
Cow position: chr15:3791460-3791930 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 69, 52

Conread position: 3-488
Cow position: chr15:44120-44604 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 58

Conread position: 3-488
Cow position: chr15:33700156-33700641 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 60

Conread position: 3-488
Cow position: chr15:41359651-41360139 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 50

Conread position: 3-489
Cow position: chr15:1129338-1128853 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 50

Conread position: 3-490
Cow position: chr15:12418062-12417575 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-491
Cow position: chr15:11575365-11574877 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 3-491
Cow position: chr15:13546402-13545928 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 51

Conread position: 3-491
Cow position: chr15:36670821-36671301 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 4-280
Cow position: chr15:4730133-4730415 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 15

Conread position: 4-488
Cow position: chr15:51227777-51228252 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 56

Conread position: 5-466
Cow position: chr15:7553256-7553730 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 55

Conread position: 5-477
Cow position: chr15:32714351-32714826 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-487
Cow position: chr15:22712381-22712864 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 5-488
Cow position: chr15:17074714-17074226 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-490
Cow position: chr15:6648761-6648276 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-491
Cow position: chr15:36356416-36355929 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 32

Conread position: 5-496
Cow position: chr15:28235644-28236122 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 6-477
Cow position: chr15:44073096-44073571 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position: chr15:609469-608980 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 57

Conread position: 6-490
Cow position: chr15:2079980-2080470 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position: chr15:4219265-4218777 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position: chr15:6550965-6550474 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position: chr15:6805362-6805853 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 7-475
Cow position: chr15:25553793-25554263 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 56

Conread position: 7-477
Cow position: chr15:7848150-7847680 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-477
Cow position: chr15:42532700-42533176 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 56

Conread position: 7-488
Cow position: chr15:21533482-21533001 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 7-490
Cow position: chr15:5243380-5242914 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-491
Cow position: chr15:13682986-13683474 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 53

Conread position: 8-277
Cow position: chr15:12366046-12366324 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 52

Conread position: 9-391
Cow position: chr15:4654122-4654508 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 51

Conread position: 10-353
Cow position: chr15:7671284-7670944 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 50

Conread position: 10-463
Cow position: chr15:2021793-2021338 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 11-487
Cow position: chr15:8628964-8629442 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 49

Conread position: 11-488
Cow position: chr15:17681629-17681155 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 49

Conread position: 12-180
Cow position: chr15:28240742-28240911 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 48

Conread position: 12-184
Cow position: chr15:17398350-17398523 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 48

Conread position: 12-466
Cow position: chr15:37394384-37394830 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 31

Conread position: 12-488
Cow position: chr15:35846849-35847322 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 319
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 83, 71

Conread position: 12-490
Cow position: chr15:2899603-2899118 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 12-490
Cow position: chr15:4924813-4925289 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 13-228
Cow position: chr15:53341656-53341872 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 17

Conread position: 13-490
Cow position: chr15:4727828-4728290 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 14-490
Cow position: chr15:20155524-20155043 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 321
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 39

Conread position: 15-476
Cow position: chr15:17295665-17296124 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 45

Conread position: 16-393
Cow position: chr15:3152908-3152529 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 44

Conread position: 16-420
Cow position: chr15:1298994-1298587 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 16-443
Cow position: chr15:11291108-11290689 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 16-468
Cow position: chr15:20173328-20172879 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 16-488
Cow position: chr15:443128-442652 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 25

Conread position: 16-488
Cow position: chr15:41786051-41785572 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 303
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 94

Conread position: 16-491
Cow position: chr15:6281311-6281783 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 17-488
Cow position: chr15:12442185-12442661 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 43

Conread position: 19-487
Cow position: chr15:36622998-36622534 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 70

Conread position: 20-341
Cow position: chr15:21840930-21841251 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 41

Conread position: 30-403
Cow position: chr15:29899011-29899383 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 30

Conread position: 31-488
Cow position: chr15:5913906-5913457 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 311
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 31

Conread position: 31-493
Cow position: chr15:36423938-36423473 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 9

Conread position: 32-340
Cow position: chr15:26079785-26079471 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 28

Conread position: 40-487
Cow position: chr15:25065795-25066242 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 285
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 24

Conread position: 40-491
Cow position: chr15:52464560-52464109 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 41-438
Cow position: chr15:662243-661843 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 41-488
Cow position: chr15:32876716-32877151 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 48-357
Cow position: chr15:39419179-39419476 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 49-427
Cow position: chr15:17699877-17700263 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 14

Conread position: 49-490
Cow position: chr15:33717946-33718384 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 295
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 11

Conread position: 51-477
Cow position: chr15:42419252-42418817 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 51-491
Cow position: chr15:13076213-13076659 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 53-369
Cow position: chr15:25909909-25909588 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr15:2436203-2436626 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 54, 7

Conread position: 53-488
Cow position: chr15:9910405-9909966 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr15:16784022-16784456 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr15:50308769-50308336 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-490
Cow position: chr15:8753557-8754000 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 55-474
Cow position: chr15:20353104-20352677 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 7

Conread position: 56-490
Cow position: chr15:4860251-4859819 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 57

Conread position: 57-477
Cow position: chr15:44364657-44364231 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 43

Conread position: 58-488
Cow position: chr15:6066025-6065605 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 62-273
Cow position: chr15:5005031-5004820 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 117, 54

Conread position: 62-360
Cow position: chr15:23057952-23057655 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 47

Conread position: 62-409
Cow position: chr15:35855176-35855524 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 60

Conread position: 62-490
Cow position: chr15:48556424-48556859 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 66-487
Cow position: chr15:21607483-21607910 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 55

Conread position: 71-488
Cow position: chr15:2560132-2560555 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 76-490
Cow position: chr15:6120095-6120518 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 45

Conread position: 77-493
Cow position: chr15:39091475-39091066 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 79-420
Cow position: chr15:18064-18403 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 22

Conread position: 79-467
Cow position: chr15:21940302-21939907 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 80-488
Cow position: chr15:5020095-5020498 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 42

Conread position: 83-465
Cow position: chr15:5983354-5983742 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 84-472
Cow position: chr15:6240937-6241316 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 36

Conread position: 85-488
Cow position: chr15:31357871-31357463 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 86-407
Cow position: chr15:44378251-44378573 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 33

Conread position: 93-326
Cow position: chr15:24286779-24286549 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 7

Conread position: 93-488
Cow position: chr15:6758740-6758341 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 93-488
Cow position: chr15:26389226-26388832 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 195

Conread position: 94-488
Cow position: chr15:37382852-37382452 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 119

Conread position: 98-475
Cow position: chr15:14756933-14757306 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 104-488
Cow position: chr15:3892337-3892720 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 7

Conread position: 114-423
Cow position: chr15:3792835-3793158 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 184

Conread position: 114-451
Cow position: chr15:10826202-10826534 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 72

Conread position: 114-477
Cow position: chr15:42597494-42597126 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 174

Conread position: 114-490
Cow position: chr15:561487-561866 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 144

Conread position: 114-491
Cow position: chr15:18214329-18214701 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 153

Conread position: 115-490
Cow position: chr15:6488528-6488906 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 173

Conread position: 119-488
Cow position: chr15:21153058-21152685 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 169

Conread position: 120-487
Cow position: chr15:12455896-12456264 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 77

Conread position: 122-456
Cow position: chr15:43266872-43267204 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 166

Conread position: 128-490
Cow position: chr15:2806481-2806132 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 11

Conread position: 135-488
Cow position: chr15:44861894-44862248 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 112

Conread position: 137-470
Cow position: chr15:1775942-1776280 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 99

Conread position: 141-336
Cow position: chr15:52748889-52749085 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 91

Conread position: 148-461
Cow position: chr15:21645029-21644717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 34, 140

Conread position: 148-488
Cow position: chr15:677853-678197 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 150-491
Cow position: chr15:20348459-20348127 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 18

Conread position: 150-491
Cow position: chr15:23560829-23561170 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 151-487
Cow position: chr15:52867431-52867765 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 83

Conread position: 161-490
Cow position: chr15:16740868-16741196 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 114

Conread position: 163-487
Cow position: chr15:14321000-14321298 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 169-488
Cow position: chr15:25165285-25164968 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 113

Conread position: 172-488
Cow position: chr15:19191391-19191702 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 207, 94

Conread position: 172-488
Cow position: chr15:50142082-50142395 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 19

Conread position: 173-487
Cow position: chr15:13388524-13388213 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 101

Conread position: 176-470
Cow position: chr15:37770238-37769946 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 98

Conread position: 177-477
Cow position: chr15:4712734-4713033 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 105

Conread position: 178-473
Cow position: chr15:31162880-31162578 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 158

Conread position: 178-475
Cow position: chr15:25463696-25463404 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 71, 104

Conread position: 178-477
Cow position: chr15:9438424-9438715 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 90

Conread position: 178-477
Cow position: chr15:18661315-18661612 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 104

Conread position: 178-488
Cow position: chr15:2533559-2533867 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 178-488
Cow position: chr15:6563721-6564028 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 88, 0

Conread position: 178-488
Cow position: chr15:10242957-10243257 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 46

Conread position: 178-489
Cow position: chr15:30984399-30984714 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 86

Conread position: 178-490
Cow position: chr15:5197783-5198095 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 178-491
Cow position: chr15:29273414-29273106 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 96

Conread position: 178-493
Cow position: chr15:8061012-8061324 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 58

Conread position: 179-488
Cow position: chr15:364141-363840 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 102

Conread position: 179-488
Cow position: chr15:45944867-45944559 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 103

Conread position: 180-491
Cow position: chr15:17237043-17236744 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 22

Conread position: 186-486
Cow position: chr15:793891-794187 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 89

Conread position: 186-488
Cow position: chr15:4822233-4821935 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 43

Conread position: 186-490
Cow position: chr15:22855720-22855417 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 88

Conread position: 194-369
Cow position: chr15:3653232-3653059 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 86

Conread position: 197-488
Cow position: chr15:41029472-41029183 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 85

Conread position: 199-490
Cow position: chr15:42727232-42727514 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 82

Conread position: 200-488
Cow position: chr15:17215130-17214856 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 72, 0

Conread position: 206-491
Cow position: chr15:6367631-6367350 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 75

Conread position: 209-488
Cow position: chr15:21915965-21916233 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 233, 42

Conread position: 215-468
Cow position: chr15:7574666-7574925 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 59

Conread position: 215-488
Cow position: chr15:7512491-7512220 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 38, 67

Conread position: 218-488
Cow position: chr15:20910569-20910830 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 85

Conread position: 240-488
Cow position: chr15:33455261-33455498 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 202, 40

Conread position: 270-489
Cow position: chr15:7952970-7953188 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 75, 183

Show alignments to all cow chromosomes.