Cow genome map

Conread name: rpigcf0_004127.y1

Conread position: 1-166
Cow position: chr16:5488066-5488232 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position: chr16:9431774-9431594 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position: chr16:11744837-11745017 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position: chr16:17111548-17111728 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 59

Conread position: 1-185
Cow position: chr16:23364615-23364432 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 59

Conread position: 1-191
Cow position: chr16:26672247-26672057 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 39

Conread position: 1-192
Cow position: chr16:24621401-24621211 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 59

Conread position: 1-217
Cow position: chr16:15410767-15410544 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 59

Conread position: 1-228
Cow position: chr16:6945556-6945790 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 59

Conread position: 1-236
Cow position: chr16:10812359-10812601 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 59

Conread position: 1-240
Cow position: chr16:34796-35042 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 59

Conread position: 1-251
Cow position: chr16:10965938-10965692 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 93, 47

Conread position: 1-251
Cow position: chr16:13539128-13538871 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 59

Conread position: 1-267
Cow position: chr16:24988421-24988146 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 98, 59

Conread position: 1-267
Cow position: chr16:26317007-26317282 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 59

Conread position: 1-267
Cow position: chr16:54479502-54479777 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 98, 59

Conread position: 1-277
Cow position: chr16:19887317-19887600 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 59

Conread position: 1-310
Cow position: chr16:11006890-11006575 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 60

Conread position: 1-323
Cow position: chr16:3011135-3011462 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 41

Conread position: 1-326
Cow position: chr16:28168022-28167692 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 98, 58

Conread position: 1-332
Cow position: chr16:53991257-53991588 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 11

Conread position: 1-334
Cow position: chr16:20642787-20643123 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 98, 59

Conread position: 1-337
Cow position: chr16:712656-712999 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 59

Conread position: 1-350
Cow position: chr16:53226021-53225669 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 59

Conread position: 1-358
Cow position: chr16:49529699-49530061 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-364
Cow position: chr16:37146273-37146638 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-370
Cow position: chr16:27710903-27710534 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-391
Cow position: chr16:37486960-37486563 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-393
Cow position: chr16:26388869-26388474 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-394
Cow position: chr16:34532590-34532985 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-423
Cow position: chr16:15349851-15349430 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-423
Cow position: chr16:21189554-21189982 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-423
Cow position: chr16:43744290-43743883 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 52

Conread position: 1-430
Cow position: chr16:39475133-39475565 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 1-431
Cow position: chr16:14569896-14569467 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 39

Conread position: 1-433
Cow position: chr16:12651224-12651664 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-442
Cow position: chr16:31586400-31585959 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-455
Cow position: chr16:44189593-44189132 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 295
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 98, 12

Conread position: 1-457
Cow position: chr16:3819661-3820130 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 62

Conread position: 1-459
Cow position: chr16:658257-658711 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-461
Cow position: chr16:13602339-13601882 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 1-463
Cow position: chr16:4343607-4343142 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-463
Cow position: chr16:12535642-12535190 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-468
Cow position: chr16:16539710-16540175 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-470
Cow position: chr16:2394665-2395152 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 61

Conread position: 1-470
Cow position: chr16:7674164-7673692 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-472
Cow position: chr16:11054292-11054762 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 1-473
Cow position: chr16:16032186-16032657 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 45

Conread position: 1-477
Cow position: chr16:3148734-3148261 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-477
Cow position: chr16:4426387-4426868 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:4462015-4461550 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-477
Cow position: chr16:4756321-4756788 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:7466909-7467386 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 53

Conread position: 1-477
Cow position: chr16:8813805-8813327 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 1-477
Cow position: chr16:11633547-11633066 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-477
Cow position: chr16:15812364-15812860 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:18694672-18694187 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 48

Conread position: 1-477
Cow position: chr16:19671936-19671474 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 1-477
Cow position: chr16:20204299-20204776 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 59

Conread position: 1-477
Cow position: chr16:23533701-23533222 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 43

Conread position: 1-477
Cow position: chr16:24210101-24209620 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:25444174-25444654 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-477
Cow position: chr16:25455165-25454683 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-477
Cow position: chr16:37053334-37053816 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:43563099-43562618 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:43894966-43894483 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr16:45655293-45654803 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-477
Cow position: chr16:46102320-46101841 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-478
Cow position: chr16:10440535-10441018 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-482
Cow position: chr16:37058713-37058232 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 1-487
Cow position: chr16:13422623-13422137 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 43

Conread position: 1-487
Cow position: chr16:26653966-26654444 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 33

Conread position: 1-487
Cow position: chr16:49219648-49219165 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 38

Conread position: 1-487
Cow position: chr16:55578967-55579435 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 335
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 100, 53

Conread position: 1-487
Cow position: chr16:56913933-56913450 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 1-488
Cow position: chr16:236793-237266 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 10

Conread position: 1-488
Cow position: chr16:340078-340545 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 28

Conread position: 1-488
Cow position: chr16:839580-840058 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position: chr16:4973226-4972738 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 51

Conread position: 1-488
Cow position: chr16:5525808-5525310 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:5894735-5895222 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 329
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 65

Conread position: 1-488
Cow position: chr16:10373138-10372648 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:14100148-14100636 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:14662812-14662335 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:15311579-15312069 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:16150451-16149960 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 1-488
Cow position: chr16:16267600-16267120 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 325
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 15

Conread position: 1-488
Cow position: chr16:18975165-18975656 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:19081348-19081834 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:23562745-23563237 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 63

Conread position: 1-488
Cow position: chr16:24407206-24407700 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-488
Cow position: chr16:26990644-26990152 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 1-488
Cow position: chr16:27593526-27593036 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:28194004-28193513 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-488
Cow position: chr16:30052245-30052734 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 1-488
Cow position: chr16:40878888-40879380 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:41036730-41036239 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:41624381-41623902 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position: chr16:44049627-44049135 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:45704496-45704009 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:46554718-46555211 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr16:47403680-47404168 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 1-488
Cow position: chr16:54180059-54179576 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-489
Cow position: chr16:45755313-45754841 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 46

Conread position: 1-489
Cow position: chr16:53612101-53612591 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:193640-193146 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 59

Conread position: 1-490
Cow position: chr16:1734035-1734531 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:2408598-2408101 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:2480848-2480363 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 59

Conread position: 1-490
Cow position: chr16:2724928-2724432 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:3769714-3769216 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:12160983-12160491 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 1-490
Cow position: chr16:14352384-14351892 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-490
Cow position: chr16:15570065-15570561 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-490
Cow position: chr16:15980081-15979586 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-490
Cow position: chr16:20634919-20634435 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 1-490
Cow position: chr16:23065308-23065794 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 1-490
Cow position: chr16:23985608-23986105 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-490
Cow position: chr16:25344274-25344771 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:25955280-25954801 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:28022756-28022286 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 1-490
Cow position: chr16:28206815-28206319 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:28468827-28468331 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position: chr16:37455181-37454697 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr16:41515428-41515926 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-490
Cow position: chr16:42074596-42074108 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 46

Conread position: 1-490
Cow position: chr16:47772558-47773055 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 1-490
Cow position: chr16:50874545-50874058 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 335
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 64

Conread position: 1-490
Cow position: chr16:51087079-51087574 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 60

Conread position: 1-490
Cow position: chr16:52526528-52527023 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 1-490
Cow position: chr16:55150646-55151122 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-491
Cow position: chr16:15187364-15187855 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr16:15494754-15495244 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-491
Cow position: chr16:19798394-19797902 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 1-491
Cow position: chr16:25087904-25088409 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr16:26666000-26666495 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-491
Cow position: chr16:37478564-37478070 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-492
Cow position: chr16:40831-41326 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 1-495
Cow position: chr16:20377758-20378242 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 59

Conread position: 2-462
Cow position: chr16:55591680-55591240 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 316
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 97, 10

Conread position: 2-466
Cow position: chr16:12244744-12244278 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-482
Cow position: chr16:7154897-7155383 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-490
Cow position: chr16:37925678-37925192 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 58

Conread position: 3-269
Cow position: chr16:25260423-25260695 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 50

Conread position: 3-335
Cow position: chr16:42118054-42118379 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 75, 24

Conread position: 3-440
Cow position: chr16:20201373-20201813 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 57

Conread position: 3-452
Cow position: chr16:49253939-49253499 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-468
Cow position: chr16:34482454-34482927 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-477
Cow position: chr16:10860027-10859554 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-477
Cow position: chr16:26627051-26627530 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 9

Conread position: 3-486
Cow position: chr16:17141704-17142191 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 55

Conread position: 3-487
Cow position: chr16:45533766-45534250 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 48

Conread position: 3-488
Cow position: chr16:50713141-50712652 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 4-277
Cow position: chr16:48495837-48495555 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 56

Conread position: 4-321
Cow position: chr16:16993477-16993788 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 31

Conread position: 4-350
Cow position: chr16:27010480-27010830 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 56

Conread position: 4-407
Cow position: chr16:13777210-13777605 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 94, 56

Conread position: 4-420
Cow position: chr16:9025018-9025439 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 281
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 58

Conread position: 4-472
Cow position: chr16:14440670-14441155 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 4-487
Cow position: chr16:25173544-25174027 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 5-301
Cow position: chr16:48104390-48104687 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 7

Conread position: 5-411
Cow position: chr16:52524597-52525005 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 272
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 55

Conread position: 5-420
Cow position: chr16:15256170-15255761 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-463
Cow position: chr16:5416967-5416512 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-488
Cow position: chr16:20278140-20278628 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-488
Cow position: chr16:22799404-22798916 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-488
Cow position: chr16:42210796-42211284 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 6-249
Cow position: chr16:15178983-15179223 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 93, 54

Conread position: 6-477
Cow position: chr16:417196-417673 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-477
Cow position: chr16:5435126-5435603 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-477
Cow position: chr16:24241099-24240622 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 48

Conread position: 6-477
Cow position: chr16:41164470-41163997 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 56

Conread position: 6-487
Cow position: chr16:9610422-9609941 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 301
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 21

Conread position: 6-490
Cow position: chr16:40293869-40293378 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 7-470
Cow position: chr16:4398551-4399026 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-477
Cow position: chr16:23249667-23249177 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-477
Cow position: chr16:27731079-27730603 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-488
Cow position: chr16:6677022-6677509 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-488
Cow position: chr16:7303058-7303544 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-488
Cow position: chr16:18651280-18650796 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-489
Cow position: chr16:21017861-21018350 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 8-416
Cow position: chr16:51040855-51041252 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 8-488
Cow position: chr16:39615528-39616011 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 45

Conread position: 9-423
Cow position: chr16:54286850-54287265 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 52

Conread position: 10-455
Cow position: chr16:11309654-11310098 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 289
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 51

Conread position: 10-490
Cow position: chr16:23028630-23029120 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 310
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 54

Conread position: 11-490
Cow position: chr16:37446392-37445912 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 12-261
Cow position: chr16:7022207-7022464 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 109

Conread position: 12-459
Cow position: chr16:3349322-3349765 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 48

Conread position: 12-490
Cow position: chr16:2233414-2232935 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 7

Conread position: 12-490
Cow position: chr16:48410941-48411427 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 13-477
Cow position: chr16:45465609-45465143 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 13-487
Cow position: chr16:1958415-1957938 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 51

Conread position: 16-395
Cow position: chr16:43465-43856 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 44

Conread position: 16-470
Cow position: chr16:599740-600191 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 31

Conread position: 16-488
Cow position: chr16:45608726-45609198 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 17-406
Cow position: chr16:29036195-29036580 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 36

Conread position: 18-477
Cow position: chr16:52856529-52856068 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 19-488
Cow position: chr16:24615751-24615287 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 21-490
Cow position: chr16:43770835-43770365 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 27-332
Cow position: chr16:42176223-42176533 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 33

Conread position: 32-488
Cow position: chr16:15904877-15904432 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 33-487
Cow position: chr16:41575582-41576031 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 33-489
Cow position: chr16:32326192-32326653 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 40-477
Cow position: chr16:55867678-55868099 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 40-488
Cow position: chr16:15804641-15805096 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 42-477
Cow position: chr16:12018107-12018537 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 292
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 18

Conread position: 44-494
Cow position: chr16:25892852-25893304 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 49-490
Cow position: chr16:1564041-1563596 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 50-488
Cow position: chr16:16095542-16095987 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 220

Conread position: 50-490
Cow position: chr16:6266127-6265685 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 294
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 48, 13

Conread position: 51-477
Cow position: chr16:29157973-29158390 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 51-488
Cow position: chr16:8482272-8481840 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 51-491
Cow position: chr16:25042401-25042846 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 53-477
Cow position: chr16:36246825-36247247 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 10

Conread position: 53-488
Cow position: chr16:12485952-12485512 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-490
Cow position: chr16:44256775-44256344 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 54-488
Cow position: chr16:25074942-25075381 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 6

Conread position: 55-341
Cow position: chr16:6264627-6264335 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 5

Conread position: 59-334
Cow position: chr16:49511446-49511166 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 78

Conread position: 62-490
Cow position: chr16:41033657-41034092 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 58

Conread position: 64-488
Cow position: chr16:13722231-13721801 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 69-443
Cow position: chr16:42711550-42711176 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 18, 13

Conread position: 69-488
Cow position: chr16:26500026-26500435 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 52

Conread position: 71-488
Cow position: chr16:14039791-14040213 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 82-493
Cow position: chr16:54296011-54296434 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 264
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 30

Conread position: 83-346
Cow position: chr16:44127479-44127209 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 38

Conread position: 88-309
Cow position: chr16:14569941-14570156 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 33

Conread position: 91-488
Cow position: chr16:24988117-24987716 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 197

Conread position: 93-488
Cow position: chr16:25879705-25880104 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 93-491
Cow position: chr16:12736668-12737072 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 188

Conread position: 93-491
Cow position: chr16:41805052-41804663 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 190

Conread position: 97-490
Cow position: chr16:701654-702051 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 98-413
Cow position: chr16:6706321-6706001 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 98-486
Cow position: chr16:49127295-49126922 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 30

Conread position: 102-490
Cow position: chr16:47018350-47017962 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 108-488
Cow position: chr16:24444844-24445241 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 172

Conread position: 113-346
Cow position: chr16:46224222-46223991 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 67, 165

Conread position: 114-314
Cow position: chr16:7084113-7084315 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 116

Conread position: 114-407
Cow position: chr16:5763256-5763546 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 115

Conread position: 114-478
Cow position: chr16:54323008-54322640 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 143

Conread position: 114-484
Cow position: chr16:23711877-23711503 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 174

Conread position: 114-488
Cow position: chr16:5665508-5665890 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 177

Conread position: 114-488
Cow position: chr16:28268305-28267928 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 166

Conread position: 114-488
Cow position: chr16:49780540-49780162 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 174

Conread position: 114-490
Cow position: chr16:49743113-49742738 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 87

Conread position: 116-477
Cow position: chr16:18745618-18745262 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 172

Conread position: 117-461
Cow position: chr16:20434007-20434345 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 11

Conread position: 118-490
Cow position: chr16:2304774-2305154 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 163

Conread position: 121-412
Cow position: chr16:47476395-47476686 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 13

Conread position: 121-488
Cow position: chr16:7457565-7457197 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 90

Conread position: 127-334
Cow position: chr16:3031113-3030905 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 92

Conread position: 131-493
Cow position: chr16:18425832-18426190 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 135-481
Cow position: chr16:15485222-15485569 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 153

Conread position: 135-488
Cow position: chr16:2960110-2960467 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 136-486
Cow position: chr16:41834313-41834653 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 210, 50

Conread position: 138-488
Cow position: chr16:18212761-18212407 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 150

Conread position: 138-488
Cow position: chr16:27012836-27013186 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 139-372
Cow position: chr16:46365367-46365129 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 149

Conread position: 161-491
Cow position: chr16:51401083-51400768 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 163-481
Cow position: chr16:29093587-29093903 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 25

Conread position: 165-490
Cow position: chr16:49142608-49142280 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 172-488
Cow position: chr16:24637040-24636727 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 110

Conread position: 172-488
Cow position: chr16:42733811-42733497 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 99

Conread position: 172-490
Cow position: chr16:25935220-25935535 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 110

Conread position: 178-375
Cow position: chr16:20968467-20968276 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 178-466
Cow position: chr16:23810001-23810284 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 70, 96

Conread position: 178-477
Cow position: chr16:4721964-4722257 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 72

Conread position: 178-477
Cow position: chr16:5488351-5488649 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 178-477
Cow position: chr16:23656126-23655829 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 110

Conread position: 178-477
Cow position: chr16:29050124-29050423 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 55

Conread position: 178-488
Cow position: chr16:7385245-7385553 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 178-488
Cow position: chr16:54231862-54231559 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 178-490
Cow position: chr16:5833281-5833587 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 83

Conread position: 178-490
Cow position: chr16:39033853-39033553 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 51

Conread position: 178-491
Cow position: chr16:50190634-50190326 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 180-488
Cow position: chr16:16681113-16680804 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 102

Conread position: 186-490
Cow position: chr16:53510036-53509740 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 188-373
Cow position: chr16:17111808-17111992 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 94

Conread position: 188-477
Cow position: chr16:12175575-12175289 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 53

Conread position: 189-495
Cow position: chr16:46572084-46571777 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 6

Conread position: 190-491
Cow position: chr16:4367117-4367412 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 16

Conread position: 199-442
Cow position: chr16:48371602-48371361 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 50, 65

Conread position: 203-420
Cow position: chr16:15409584-15409364 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 0

Conread position: 213-486
Cow position: chr16:24147172-24147439 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 59

Conread position: 216-363
Cow position: chr16:24702570-24702425 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 64

Conread position: 249-488
Cow position: chr16:7541039-7541271 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 193, 30

Conread position: 275-496
Cow position: chr16:9417439-9417662 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.