Cow genome map

Conread name: rpigcf0_004127.y1

Conread position: 1-157
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 58

Conread position: 1-180
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 58

Conread position: 1-183
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 43

Conread position: 1-216
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 98, 59

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 59

Conread position: 1-235
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 98, 59

Conread position: 1-239
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 98, 61

Conread position: 1-267
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 98, 59

Conread position: 1-314
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 28

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 247
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 53

Conread position: 1-387
Cow position:
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 1-420
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 29

Conread position: 1-438
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 59

Conread position: 1-455
Cow position:
Alignm length: 460
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-466
Cow position:
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 1-468
Cow position:
Alignm length: 482
Alignm identity: 318
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 33, 64

Conread position: 1-472
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 18

Conread position: 1-473
Cow position:
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 43

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-478
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 58

Conread position: 1-482
Cow position:
Alignm length: 490
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-482
Cow position:
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-485
Cow position:
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-487
Cow position:
Alignm length: 502
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 11

Conread position: 1-488
Cow position:
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 43

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 502
Alignm identity: 337
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 47

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 11

Conread position: 1-488
Cow position:
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 505
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 60

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-489
Cow position:
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 9

Conread position: 1-490
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position:
Alignm length: 501
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 1-490
Cow position:
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position:
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position:
Alignm length: 506
Alignm identity: 314
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 74

Conread position: 1-490
Cow position:
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-493
Cow position:
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 59

Conread position: 1-493
Cow position:
Alignm length: 505
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 2-488
Cow position:
Alignm length: 501
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 44

Conread position: 2-488
Cow position:
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-490
Cow position:
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-490
Cow position:
Alignm length: 495
Alignm identity: 322
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 60

Conread position: 3-346
Cow position:
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 57

Conread position: 3-385
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-468
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 3-469
Cow position:
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 57

Conread position: 3-477
Cow position:
Alignm length: 484
Alignm identity: 302
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 12

Conread position: 3-481
Cow position:
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 56

Conread position: 3-486
Cow position:
Alignm length: 497
Alignm identity: 316
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 94, 58

Conread position: 5-373
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-420
Cow position:
Alignm length: 425
Alignm identity: 269
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 102, 57

Conread position: 5-468
Cow position:
Alignm length: 471
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 61

Conread position: 5-475
Cow position:
Alignm length: 480
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 5-477
Cow position:
Alignm length: 484
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 58

Conread position: 5-488
Cow position:
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 56

Conread position: 5-488
Cow position:
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 6-475
Cow position:
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-477
Cow position:
Alignm length: 483
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 54

Conread position: 7-345
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 53

Conread position: 8-490
Cow position:
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 10-372
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 89, 20

Conread position: 10-427
Cow position:
Alignm length: 433
Alignm identity: 281
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 54

Conread position: 10-475
Cow position:
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 10-490
Cow position:
Alignm length: 490
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 12-486
Cow position:
Alignm length: 489
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 50

Conread position: 12-486
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 12-493
Cow position:
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 16-487
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 17-490
Cow position:
Alignm length: 484
Alignm identity: 304
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 38

Conread position: 18-382
Cow position:
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 20-488
Cow position:
Alignm length: 480
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 40

Conread position: 31-485
Cow position:
Alignm length: 462
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 37-488
Cow position:
Alignm length: 466
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 49-467
Cow position:
Alignm length: 425
Alignm identity: 270
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 15

Conread position: 49-477
Cow position:
Alignm length: 439
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 51-464
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 9

Conread position: 51-490
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 417

Conread position: 53-490
Cow position:
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 54-488
Cow position:
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 6

Conread position: 57-477
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 66-487
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 56

Conread position: 70-488
Cow position:
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 71-318
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 50

Conread position: 76-488
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 79-488
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 92-354
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 87, 105

Conread position: 92-477
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 93-472
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 13

Conread position: 93-488
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 98-488
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 99-477
Cow position:
Alignm length: 400
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 188

Conread position: 99-488
Cow position:
Alignm length: 399
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 112-473
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 176

Conread position: 113-488
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 170

Conread position: 114-490
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 114

Conread position: 118-423
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 170

Conread position: 120-489
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 157

Conread position: 123-420
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 77

Conread position: 128-488
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 153

Conread position: 129-488
Cow position:
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 160

Conread position: 132-488
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 156

Conread position: 135-358
Cow position:
Alignm length: 232
Alignm identity: 176
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 51, 70

Conread position: 135-391
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 136

Conread position: 135-462
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 145

Conread position: 135-487
Cow position:
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 143

Conread position: 136-491
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 46, 144

Conread position: 148-490
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 152-488
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 136

Conread position: 154-405
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 125

Conread position: 157-488
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 127

Conread position: 161-477
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 161-490
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 46

Conread position: 162-490
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 165-477
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 87

Conread position: 169-488
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 115

Conread position: 170-488
Cow position:
Alignm length: 322
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 18

Conread position: 172-490
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 60

Conread position: 178-358
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 104

Conread position: 178-469
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 178-477
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 85

Conread position: 178-482
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 178-487
Cow position:
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 208, 64

Conread position: 178-490
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 104

Conread position: 178-491
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 85

Conread position: 179-409
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 93

Conread position: 181-488
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 101

Conread position: 186-488
Cow position:
Alignm length: 306
Alignm identity: 198
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 65

Conread position: 194-490
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 88

Conread position: 195-477
Cow position:
Alignm length: 285
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 87

Conread position: 202-496
Cow position:
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 70

Conread position: 213-489
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 57

Show alignments to all cow chromosomes.