Cow genome map

Conread name: rpigcf0_004127.y1

Conread position: 1-166
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 59

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 59

Conread position: 1-205
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 59

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 59

Conread position: 1-241
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 59

Conread position: 1-251
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 59

Conread position: 1-251
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 30

Conread position: 1-267
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 59

Conread position: 1-268
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 59

Conread position: 1-271
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 52

Conread position: 1-277
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 59

Conread position: 1-350
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-357
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 280

Conread position: 1-423
Cow position:
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-441
Cow position:
Alignm length: 454
Alignm identity: 286
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 72

Conread position: 1-447
Cow position:
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-452
Cow position:
Alignm length: 464
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 57

Conread position: 1-460
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-469
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 59

Conread position: 1-472
Cow position:
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 59

Conread position: 1-475
Cow position:
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 53

Conread position: 1-477
Cow position:
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 54

Conread position: 1-477
Cow position:
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-477
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-486
Cow position:
Alignm length: 504
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 60

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 62

Conread position: 1-488
Cow position:
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 41

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-488
Cow position:
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 60

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 499
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 500
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 59

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-488
Cow position:
Alignm length: 497
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position:
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 1-490
Cow position:
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position:
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 59

Conread position: 1-490
Cow position:
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position:
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 62

Conread position: 1-490
Cow position:
Alignm length: 502
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position:
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position:
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 1-490
Cow position:
Alignm length: 500
Alignm identity: 323
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 15

Conread position: 1-490
Cow position:
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 52

Conread position: 1-491
Cow position:
Alignm length: 497
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 53

Conread position: 1-491
Cow position:
Alignm length: 501
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 3-490
Cow position:
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 9

Conread position: 4-325
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 50

Conread position: 4-489
Cow position:
Alignm length: 496
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 56

Conread position: 5-372
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 49

Conread position: 5-468
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 5-488
Cow position:
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 55

Conread position: 5-488
Cow position:
Alignm length: 495
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-488
Cow position:
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 7

Conread position: 5-488
Cow position:
Alignm length: 495
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-491
Cow position:
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 5-493
Cow position:
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 55

Conread position: 6-488
Cow position:
Alignm length: 488
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-488
Cow position:
Alignm length: 496
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position:
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 6-490
Cow position:
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 6-491
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 8-466
Cow position:
Alignm length: 469
Alignm identity: 305
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 88, 58

Conread position: 9-488
Cow position:
Alignm length: 493
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 57

Conread position: 10-474
Cow position:
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 12-469
Cow position:
Alignm length: 473
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 29

Conread position: 12-472
Cow position:
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 48

Conread position: 15-477
Cow position:
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 45

Conread position: 15-490
Cow position:
Alignm length: 489
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 16-426
Cow position:
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 16-488
Cow position:
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 16-489
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 44

Conread position: 16-490
Cow position:
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 17-372
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 43

Conread position: 34-477
Cow position:
Alignm length: 457
Alignm identity: 296
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 28

Conread position: 40-440
Cow position:
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 49-373
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 49-490
Cow position:
Alignm length: 446
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 53-279
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 7

Conread position: 53-477
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position:
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 55-490
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 8

Conread position: 62-486
Cow position:
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 54

Conread position: 69-392
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 53

Conread position: 69-490
Cow position:
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 52

Conread position: 70-467
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 50

Conread position: 73-327
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 61

Conread position: 79-490
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 80-488
Cow position:
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 85-469
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 36

Conread position: 86-452
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 105-477
Cow position:
Alignm length: 378
Alignm identity: 247
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 165

Conread position: 111-401
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 227

Conread position: 113-490
Cow position:
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 176

Conread position: 114-267
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 114-420
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 114-477
Cow position:
Alignm length: 372
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 66, 85

Conread position: 114-488
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 114-491
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 126

Conread position: 117-491
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 136

Conread position: 119-425
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 161

Conread position: 130-482
Cow position:
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 95

Conread position: 132-488
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 110

Conread position: 135-350
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 76

Conread position: 148-490
Cow position:
Alignm length: 353
Alignm identity: 231
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 126

Conread position: 159-430
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 42

Conread position: 159-490
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 170-488
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 104

Conread position: 172-490
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 88

Conread position: 178-448
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 7

Conread position: 178-477
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 178-477
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 178-486
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 80

Conread position: 178-487
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 174, 67

Conread position: 178-488
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 104

Conread position: 215-369
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 150, 55

Conread position: 244-487
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.