Cow genome map

Conread name: rpigcf0_004127.y1

Conread position: 1-171
Cow position: chr9:43493827-43493998 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position: chr9:6304490-6304310 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 59

Conread position: 1-180
Cow position: chr9:30737557-30737737 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 36

Conread position: 1-222
Cow position: chr9:24423204-24423432 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 59

Conread position: 1-226
Cow position: chr9:3729931-3730159 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 93, 59

Conread position: 1-251
Cow position: chr9:44518786-44518530 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 44

Conread position: 1-271
Cow position: chr9:10325828-10326102 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 59

Conread position: 1-272
Cow position: chr9:6550060-6550340 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 98, 59

Conread position: 1-301
Cow position: chr9:11504863-11505169 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 29

Conread position: 1-305
Cow position: chr9:5269605-5269919 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 26

Conread position: 1-305
Cow position: chr9:43667713-43668019 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 99, 59

Conread position: 1-312
Cow position: chr9:52401842-52402159 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 98, 59

Conread position: 1-327
Cow position: chr9:17008079-17007745 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 74, 61

Conread position: 1-327
Cow position: chr9:56176653-56176984 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 59

Conread position: 1-335
Cow position: chr9:1249114-1248774 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-342
Cow position: chr9:127969-127645 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 99, 59

Conread position: 1-350
Cow position: chr9:38679011-38679354 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 28

Conread position: 1-354
Cow position: chr9:2484733-2484381 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 98, 39

Conread position: 1-389
Cow position: chr9:14002923-14003306 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-407
Cow position: chr9:22319531-22319121 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 63

Conread position: 1-420
Cow position: chr9:43856654-43856231 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-432
Cow position: chr9:3960284-3959863 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 26

Conread position: 1-432
Cow position: chr9:18539546-18539977 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-442
Cow position: chr9:15986892-15987335 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 84

Conread position: 1-442
Cow position: chr9:36584880-36585310 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 293
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 178, 62

Conread position: 1-456
Cow position: chr9:12260481-12260021 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 1-463
Cow position: chr9:9198982-9199441 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-466
Cow position: chr9:17633363-17633841 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-468
Cow position: chr9:15052997-15052534 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 59

Conread position: 1-468
Cow position: chr9:37067730-37068215 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 334
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 52

Conread position: 1-468
Cow position: chr9:51692737-51692261 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-475
Cow position: chr9:20941357-20941841 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-477
Cow position: chr9:2495858-2495376 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 61

Conread position: 1-477
Cow position: chr9:2527171-2527641 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 319
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:2548812-2548333 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:3222359-3222829 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 9

Conread position: 1-477
Cow position: chr9:4128055-4127594 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 13

Conread position: 1-477
Cow position: chr9:6252451-6252929 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-477
Cow position: chr9:10856903-10857397 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:13220426-13220903 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:31810460-31810942 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:32972250-32972731 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:47044830-47045312 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-477
Cow position: chr9:51010450-51010903 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 1-486
Cow position: chr9:26054929-26055404 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-486
Cow position: chr9:26123605-26124087 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 59

Conread position: 1-487
Cow position: chr9:6979085-6979573 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 62

Conread position: 1-487
Cow position: chr9:24874063-24873583 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 52

Conread position: 1-487
Cow position: chr9:37097504-37097978 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 59

Conread position: 1-487
Cow position: chr9:55031398-55031879 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-488
Cow position: chr9:1062812-1062321 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:1071401-1070909 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:1099477-1099969 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:2214016-2214515 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:2835113-2834626 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position: chr9:2856727-2857218 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:2873357-2873850 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-488
Cow position: chr9:3756948-3756464 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:5430350-5430841 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:5452757-5452265 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:6365260-6365752 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 1-488
Cow position: chr9:6708034-6707543 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:6886479-6886954 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:7104348-7103856 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:8952154-8951673 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 59

Conread position: 1-488
Cow position: chr9:9015957-9016449 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-488
Cow position: chr9:13312448-13312932 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position: chr9:13472678-13472201 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-488
Cow position: chr9:17017637-17018129 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:18071367-18071857 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 59

Conread position: 1-488
Cow position: chr9:23005677-23005213 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:26325629-26326120 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:28681083-28681575 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:28785225-28785717 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 59

Conread position: 1-488
Cow position: chr9:31417632-31417141 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:37174522-37174030 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:37253287-37253779 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:39303670-39303178 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:41313158-41312666 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:43496017-43496509 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:44168472-44168966 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:44203197-44202705 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:45876400-45876893 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 59

Conread position: 1-488
Cow position: chr9:46627194-46627686 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 52

Conread position: 1-488
Cow position: chr9:46667917-46667423 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 1-488
Cow position: chr9:46669840-46670303 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:48795409-48794917 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:50840316-50840807 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:54459619-54459127 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:59196740-59197225 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:59479965-59479482 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-488
Cow position: chr9:64012346-64011854 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:2208785-2208293 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-490
Cow position: chr9:3061474-3061966 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:3545710-3546195 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 1-490
Cow position: chr9:3806481-3806971 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 1-490
Cow position: chr9:3997875-3997391 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 1-490
Cow position: chr9:5517072-5517557 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 6

Conread position: 1-490
Cow position: chr9:5608888-5608395 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 60

Conread position: 1-490
Cow position: chr9:7005624-7006119 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:9958303-9957810 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:12161491-12161975 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:14045557-14046044 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:17303090-17302601 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:18506941-18506446 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:21412195-21412682 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 1-490
Cow position: chr9:23421476-23421960 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 59

Conread position: 1-490
Cow position: chr9:24918405-24917909 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:26088117-26087626 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 59

Conread position: 1-490
Cow position: chr9:28658166-28657678 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:29787794-29787302 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 1-490
Cow position: chr9:33068612-33068119 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:35022854-35023331 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 319
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 28

Conread position: 1-490
Cow position: chr9:36845044-36844562 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:37158727-37158233 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 1-490
Cow position: chr9:38633663-38634158 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:40143461-40142974 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 53

Conread position: 1-490
Cow position: chr9:42570099-42570594 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-490
Cow position: chr9:46525323-46524842 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 1-490
Cow position: chr9:47005624-47006112 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 1-490
Cow position: chr9:53776584-53777070 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 59

Conread position: 1-490
Cow position: chr9:54413724-54413231 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 1-491
Cow position: chr9:5328464-5327989 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 46

Conread position: 1-491
Cow position: chr9:17870377-17870883 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr9:19156410-19155912 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 1-491
Cow position: chr9:20988188-20988673 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 59

Conread position: 1-491
Cow position: chr9:22655695-22656176 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 1-491
Cow position: chr9:27037991-27038491 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 1-491
Cow position: chr9:30674958-30675452 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 54

Conread position: 1-491
Cow position: chr9:34059750-34059255 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 2-225
Cow position: chr9:2681437-2681666 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 97, 58

Conread position: 2-237
Cow position: chr9:60564720-60564481 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 175, 62

Conread position: 2-251
Cow position: chr9:23044356-23044608 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 14

Conread position: 2-472
Cow position: chr9:62444091-62443629 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-477
Cow position: chr9:7059167-7058686 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 2-477
Cow position: chr9:55797221-55796741 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 2-488
Cow position: chr9:31093037-31092564 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 28

Conread position: 2-490
Cow position: chr9:2864677-2864197 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 2-490
Cow position: chr9:13180806-13181287 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 2-490
Cow position: chr9:22569989-22570483 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 3-482
Cow position: chr9:1404696-1405174 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 39

Conread position: 3-488
Cow position: chr9:62130924-62131421 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 24

Conread position: 3-489
Cow position: chr9:50775593-50776075 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 3-490
Cow position: chr9:1998410-1997924 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 3-490
Cow position: chr9:21461360-21461837 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 3-490
Cow position: chr9:30139721-30139240 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 23

Conread position: 3-490
Cow position: chr9:30401170-30401659 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 53

Conread position: 3-490
Cow position: chr9:42868984-42868493 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 51

Conread position: 3-491
Cow position: chr9:10679040-10678551 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 57

Conread position: 4-347
Cow position: chr9:59508292-59507943 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 20

Conread position: 4-420
Cow position: chr9:39728739-39728302 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 287
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 112

Conread position: 4-490
Cow position: chr9:1939146-1938664 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 27

Conread position: 5-205
Cow position: chr9:6549406-6549613 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 55

Conread position: 5-233
Cow position: chr9:39813202-39813438 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 55

Conread position: 5-239
Cow position: chr9:61198468-61198227 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 58

Conread position: 5-355
Cow position: chr9:43225814-43225462 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-389
Cow position: chr9:9021718-9021328 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-477
Cow position: chr9:16178474-16178949 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-477
Cow position: chr9:52002218-52001745 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 5-477
Cow position: chr9:56166535-56166058 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 61

Conread position: 5-487
Cow position: chr9:32985278-32985744 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 301
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 42

Conread position: 5-488
Cow position: chr9:45791735-45792223 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 5-488
Cow position: chr9:52526038-52526526 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 55

Conread position: 6-331
Cow position: chr9:27897895-27898227 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 55

Conread position: 6-394
Cow position: chr9:10939612-10939996 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 51

Conread position: 6-488
Cow position: chr9:5627707-5628194 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-488
Cow position: chr9:62669666-62669178 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 6-490
Cow position: chr9:10567478-10566982 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 7-487
Cow position: chr9:52408436-52407949 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 7-488
Cow position: chr9:4940609-4940123 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 9-381
Cow position: chr9:47110160-47110528 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 90, 7

Conread position: 10-324
Cow position: chr9:12250883-12251191 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 17

Conread position: 10-472
Cow position: chr9:20506004-20506460 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 292
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 81, 51

Conread position: 10-477
Cow position: chr9:29337802-29338272 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 12

Conread position: 12-488
Cow position: chr9:1837849-1838325 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 48

Conread position: 12-490
Cow position: chr9:826034-825528 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 13-370
Cow position: chr9:17301235-17300872 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 47

Conread position: 13-490
Cow position: chr9:6764877-6764390 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 16-251
Cow position: chr9:19303159-19302917 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 44

Conread position: 16-489
Cow position: chr9:29193670-29193194 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 44

Conread position: 16-493
Cow position: chr9:12285809-12285326 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 44

Conread position: 17-487
Cow position: chr9:59431400-59431869 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 43

Conread position: 18-488
Cow position: chr9:36088435-36088902 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 19-477
Cow position: chr9:47170953-47171418 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 19-488
Cow position: chr9:18109602-18110075 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 19-488
Cow position: chr9:33844915-33845393 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 20-277
Cow position: chr9:31077862-31078124 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 162, 40

Conread position: 21-348
Cow position: chr9:37181765-37182098 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 39

Conread position: 21-491
Cow position: chr9:62764404-62763930 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 23-180
Cow position: chr9:26277547-26277705 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 37

Conread position: 31-358
Cow position: chr9:23526673-23527004 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 29

Conread position: 31-374
Cow position: chr9:17588049-17588399 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 33-488
Cow position: chr9:34238844-34238384 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 35-488
Cow position: chr9:7458808-7458344 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 36-240
Cow position: chr9:47199514-47199725 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 26

Conread position: 48-477
Cow position: chr9:382957-382529 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 49-316
Cow position: chr9:31124007-31124280 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 11

Conread position: 49-487
Cow position: chr9:22442417-22442849 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 11

Conread position: 49-488
Cow position: chr9:33843255-33843698 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 53-488
Cow position: chr9:9210078-9210518 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr9:13187139-13187579 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr9:17061421-17060983 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 53-488
Cow position: chr9:42902505-42902064 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 7

Conread position: 54-488
Cow position: chr9:18830676-18831107 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 6

Conread position: 55-326
Cow position: chr9:34761687-34761971 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 60-396
Cow position: chr9:42216298-42216636 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 6

Conread position: 61-488
Cow position: chr9:20409326-20409743 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 60

Conread position: 62-413
Cow position: chr9:9871882-9872240 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 62-488
Cow position: chr9:1519540-1519957 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 23

Conread position: 63-236
Cow position: chr9:30475202-30475382 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 57

Conread position: 63-301
Cow position: chr9:7844841-7844609 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 16

Conread position: 63-490
Cow position: chr9:13492697-13493117 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 58

Conread position: 69-477
Cow position: chr9:5006923-5007330 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 52

Conread position: 69-485
Cow position: chr9:13848592-13848160 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 69-488
Cow position: chr9:44580274-44579846 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 69-489
Cow position: chr9:58615745-58615316 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 31, 202

Conread position: 70-397
Cow position: chr9:64049226-64049553 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 79-488
Cow position: chr9:174813-174399 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 211

Conread position: 79-488
Cow position: chr9:56862197-56861805 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 81-477
Cow position: chr9:27781951-27781547 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 41

Conread position: 82-482
Cow position: chr9:34946051-34945644 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 39

Conread position: 85-468
Cow position: chr9:9491975-9491600 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 65

Conread position: 85-477
Cow position: chr9:51178702-51178303 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 85-488
Cow position: chr9:34900432-34900846 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 93-488
Cow position: chr9:59496207-59495808 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 109-403
Cow position: chr9:4191272-4191571 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 180

Conread position: 114-354
Cow position: chr9:60589768-60590006 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 42

Conread position: 114-358
Cow position: chr9:44920234-44920481 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 87

Conread position: 114-475
Cow position: chr9:50326694-50327059 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 105

Conread position: 114-488
Cow position: chr9:4673059-4673430 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 85

Conread position: 114-488
Cow position: chr9:8282271-8281895 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 172

Conread position: 114-488
Cow position: chr9:19545508-19545885 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 152

Conread position: 114-488
Cow position: chr9:62818224-62817846 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 174

Conread position: 114-490
Cow position: chr9:22803655-22803273 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 175

Conread position: 116-303
Cow position: chr9:11156943-11156756 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 12

Conread position: 117-490
Cow position: chr9:56561751-56562136 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 28

Conread position: 118-488
Cow position: chr9:43494049-43494423 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 170

Conread position: 123-495
Cow position: chr9:30439404-30439778 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 85

Conread position: 128-490
Cow position: chr9:5887380-5887017 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 51, 192

Conread position: 132-422
Cow position: chr9:15802414-15802709 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 184
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 50, 156

Conread position: 132-488
Cow position: chr9:18710508-18710867 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 156

Conread position: 132-488
Cow position: chr9:34567663-34568019 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 134-488
Cow position: chr9:36830034-36829677 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 8

Conread position: 135-488
Cow position: chr9:34917637-34917989 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 135-488
Cow position: chr9:60409420-60409777 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 153

Conread position: 136-488
Cow position: chr9:35624335-35624689 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 150-488
Cow position: chr9:3052298-3052640 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 152-488
Cow position: chr9:11744646-11744316 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 154-477
Cow position: chr9:2618755-2618420 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 13, 129

Conread position: 157-326
Cow position: chr9:30020476-30020647 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 78

Conread position: 165-420
Cow position: chr9:58747766-58747514 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 106

Conread position: 170-303
Cow position: chr9:64005766-64005633 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 101

Conread position: 170-327
Cow position: chr9:42958538-42958385 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 57

Conread position: 170-396
Cow position: chr9:26077807-26077594 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 171-490
Cow position: chr9:24996431-24996734 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 105

Conread position: 172-488
Cow position: chr9:54996934-54997249 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 99

Conread position: 173-375
Cow position: chr9:9415018-9415211 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 75, 109

Conread position: 175-488
Cow position: chr9:34690466-34690159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 107

Conread position: 177-491
Cow position: chr9:19536972-19536660 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 235, 74

Conread position: 178-375
Cow position: chr9:25596719-25596914 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 104

Conread position: 178-454
Cow position: chr9:11286824-11286559 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 178-460
Cow position: chr9:5059015-5058732 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 96

Conread position: 178-488
Cow position: chr9:873723-874027 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 104

Conread position: 178-488
Cow position: chr9:19078932-19079240 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 102

Conread position: 178-488
Cow position: chr9:25548087-25547778 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 104

Conread position: 178-488
Cow position: chr9:34688552-34688843 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 297, 91

Conread position: 178-488
Cow position: chr9:35565472-35565164 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 178-488
Cow position: chr9:63563481-63563795 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 308

Conread position: 178-490
Cow position: chr9:3411827-3411516 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 86

Conread position: 178-490
Cow position: chr9:64562278-64562581 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 74, 51

Conread position: 179-488
Cow position: chr9:4552876-4553171 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 31, 27

Conread position: 180-488
Cow position: chr9:1307283-1306977 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 102

Conread position: 186-395
Cow position: chr9:34460528-34460320 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 96

Conread position: 186-480
Cow position: chr9:28774192-28773902 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 187-370
Cow position: chr9:24725676-24725852 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 94

Conread position: 188-430
Cow position: chr9:8601812-8601573 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 188-473
Cow position: chr9:5840070-5839775 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 61, 8

Conread position: 188-477
Cow position: chr9:44516735-44516448 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 107

Conread position: 190-490
Cow position: chr9:61237690-61237388 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 71

Conread position: 193-477
Cow position: chr9:44820968-44821249 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 195-476
Cow position: chr9:7830819-7830542 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 58, 87

Conread position: 204-477
Cow position: chr9:40316229-40316499 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 78

Conread position: 208-490
Cow position: chr9:9515768-9516040 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 63

Conread position: 210-348
Cow position: chr9:29671689-29671553 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 60

Conread position: 217-488
Cow position: chr9:18243877-18243608 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 65

Conread position: 217-488
Cow position: chr9:24423628-24423897 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 65

Show alignments to all cow chromosomes.