Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 2-276 |
| Cow position: | chr11:59156213-59155944 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 3-262 |
| Cow position: | chr11:15503764-15504028 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 5-241 |
| Cow position: | chr11:8841078-8840838 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 5-247 |
| Cow position: | chr11:21894485-21894246 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 5-247 |
| Cow position: | chr11:68207183-68206933 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 5-252 |
| Cow position: | chr11:3833683-3833441 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 91, 140 |
| Conread position: | 5-252 |
| Cow position: | chr11:38638790-38639031 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 243, 37 |
| Conread position: | 5-253 |
| Cow position: | chr11:26483386-26483627 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 5-253 |
| Cow position: | chr11:29947272-29947018 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 52, 171 |
| Conread position: | 5-253 |
| Cow position: | chr11:44576074-44575825 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 5-253 |
| Cow position: | chr11:50197780-50197523 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-253 |
| Cow position: | chr11:75480370-75480115 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 5-260 |
| Cow position: | chr11:35881571-35881831 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 5-260 |
| Cow position: | chr11:76114317-76114574 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 164 |
| Conread position: | 5-265 |
| Cow position: | chr11:42836295-42836036 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 5-267 |
| Cow position: | chr11:82232088-82232342 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 5-268 |
| Cow position: | chr11:47165469-47165212 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 5-271 |
| Cow position: | chr11:76369854-76369590 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 5-273 |
| Cow position: | chr11:4412355-4412083 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 264 |
| Conread position: | 5-276 |
| Cow position: | chr11:23251939-23251656 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-276 |
| Cow position: | chr11:42793295-42793037 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 244, 41 |
| Conread position: | 5-276 |
| Cow position: | chr11:44031664-44031937 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-276 |
| Cow position: | chr11:59702149-59702420 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 172 |
| Conread position: | 5-279 |
| Cow position: | chr11:23128887-23128604 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 5-285 |
| Cow position: | chr11:67454552-67454835 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 5-287 |
| Cow position: | chr11:47586682-47586402 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 5-287 |
| Cow position: | chr11:50153152-50152867 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 5-287 |
| Cow position: | chr11:52297555-52297273 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 5-289 |
| Cow position: | chr11:16251589-16251296 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 181 |
| Conread position: | 5-292 |
| Cow position: | chr11:27248157-27248443 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 151 |
| Conread position: | 5-292 |
| Cow position: | chr11:77759092-77758805 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 5-293 |
| Cow position: | chr11:58588008-58588301 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 263 |
| Conread position: | 5-293 |
| Cow position: | chr11:65409497-65409200 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 268 |
| Conread position: | 5-294 |
| Cow position: | chr11:955029-955320 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 88, 144 |
| Conread position: | 5-295 |
| Cow position: | chr11:2092012-2092287 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-296 |
| Cow position: | chr11:8525438-8525154 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 16 |
| Conread position: | 5-296 |
| Cow position: | chr11:25386735-25387020 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 91, 125 |
| Conread position: | 5-296 |
| Cow position: | chr11:35579919-35580212 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 5-296 |
| Cow position: | chr11:59872591-59872887 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 183 |
| Conread position: | 5-374 |
| Cow position: | chr11:17321326-17321697 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 5-381 |
| Cow position: | chr11:13061554-13061178 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 6-253 |
| Cow position: | chr11:41577339-41577101 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 243, 89 |
| Conread position: | 6-278 |
| Cow position: | chr11:62750084-62749817 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 237 |
| Conread position: | 6-285 |
| Cow position: | chr11:32974165-32974448 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-289 |
| Cow position: | chr11:67746943-67747234 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-292 |
| Cow position: | chr11:73512754-73512483 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 6-296 |
| Cow position: | chr11:35684833-35684537 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 6-303 |
| Cow position: | chr11:39115164-39115456 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 7-247 |
| Cow position: | chr11:56518643-56518403 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 9-243 |
| Cow position: | chr11:10294265-10294493 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 9-245 |
| Cow position: | chr11:18389192-18388958 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 9-253 |
| Cow position: | chr11:38235906-38236156 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 178 |
| Conread position: | 9-265 |
| Cow position: | chr11:86926253-86926002 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 9-276 |
| Cow position: | chr11:44637092-44636822 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 138 |
| Conread position: | 9-285 |
| Cow position: | chr11:83196170-83196443 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 10-273 |
| Cow position: | chr11:59902564-59902824 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 203, 8 |
| Conread position: | 13-290 |
| Cow position: | chr11:43913895-43914164 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 83, 145 |
| Conread position: | 15-273 |
| Cow position: | chr11:7589858-7590126 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 17-293 |
| Cow position: | chr11:30120986-30120712 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 23-253 |
| Cow position: | chr11:60302275-60302048 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 27-296 |
| Cow position: | chr11:18698560-18698836 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 29-229 |
| Cow position: | chr11:32725287-32725494 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 119 |
| Conread position: | 31-319 |
| Cow position: | chr11:36182379-36182672 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 32-276 |
| Cow position: | chr11:32609686-32609938 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 33-371 |
| Cow position: | chr11:7315432-7315101 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 34-296 |
| Cow position: | chr11:21819743-21819486 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 41-289 |
| Cow position: | chr11:65430765-65431009 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 58 |
| Conread position: | 42-253 |
| Cow position: | chr11:53719649-53719856 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 46-296 |
| Cow position: | chr11:18572509-18572759 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 48-247 |
| Cow position: | chr11:30720805-30721003 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 51-371 |
| Cow position: | chr11:81300900-81300573 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 54-287 |
| Cow position: | chr11:83066209-83066444 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 54-289 |
| Cow position: | chr11:74316420-74316662 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 54-296 |
| Cow position: | chr11:11125376-11125620 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 54-305 |
| Cow position: | chr11:25165159-25165408 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 195, 93 |
| Conread position: | 55-241 |
| Cow position: | chr11:3282773-3282951 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 55-287 |
| Cow position: | chr11:50778084-50778321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 55-289 |
| Cow position: | chr11:19508011-19508245 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 55-292 |
| Cow position: | chr11:67600482-67600735 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 55-296 |
| Cow position: | chr11:1668389-1668631 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 55-296 |
| Cow position: | chr11:21844418-21844178 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 194, 42 |
| Conread position: | 60-293 |
| Cow position: | chr11:59370734-59370966 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 62-266 |
| Cow position: | chr11:83043639-83043438 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 62-293 |
| Cow position: | chr11:42003232-42002988 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 62-304 |
| Cow position: | chr11:45646869-45646630 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 187, 35 |
| Conread position: | 62-307 |
| Cow position: | chr11:73354334-73354084 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 63-289 |
| Cow position: | chr11:75355332-75355558 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 63-292 |
| Cow position: | chr11:45632042-45631809 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 64-276 |
| Cow position: | chr11:62155354-62155563 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 64-330 |
| Cow position: | chr11:10992003-10992272 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 65-248 |
| Cow position: | chr11:27462660-27462483 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 106 |
| Conread position: | 65-287 |
| Cow position: | chr11:33341421-33341198 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 65-293 |
| Cow position: | chr11:377926-377691 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 22, 231 |
| Conread position: | 65-337 |
| Cow position: | chr11:81137946-81138225 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 66-252 |
| Cow position: | chr11:17227914-17227734 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 66-276 |
| Cow position: | chr11:71455513-71455729 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 66-287 |
| Cow position: | chr11:6400346-6400121 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 69-267 |
| Cow position: | chr11:41983718-41983526 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 71-289 |
| Cow position: | chr11:45898325-45898103 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 72-286 |
| Cow position: | chr11:34032464-34032254 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 88 |
| Conread position: | 75-253 |
| Cow position: | chr11:49396314-49396135 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 77-247 |
| Cow position: | chr11:49980855-49980682 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 77-276 |
| Cow position: | chr11:27746654-27746861 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 77-293 |
| Cow position: | chr11:47544864-47545083 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 77-293 |
| Cow position: | chr11:55333645-55333866 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 80-286 |
| Cow position: | chr11:70836628-70836431 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 80-293 |
| Cow position: | chr11:2917837-2917632 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 169, 17 |
| Conread position: | 81-289 |
| Cow position: | chr11:63516563-63516777 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 82-253 |
| Cow position: | chr11:36647102-36647276 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 83-296 |
| Cow position: | chr11:45872576-45872363 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 85-284 |
| Cow position: | chr11:81281691-81281893 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 110 |
| Conread position: | 86-296 |
| Cow position: | chr11:20238421-20238627 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 86-296 |
| Cow position: | chr11:34120944-34121151 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 16, 162 |
| Conread position: | 87-253 |
| Cow position: | chr11:48544190-48544350 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 87-273 |
| Cow position: | chr11:63520520-63520705 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 99-312 |
| Cow position: | chr11:47899037-47899249 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 150, 188 |
| Conread position: | 100-236 |
| Cow position: | chr11:44575460-44575597 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 101-242 |
| Cow position: | chr11:26277328-26277190 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 102-292 |
| Cow position: | chr11:41438461-41438267 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 104-252 |
| Cow position: | chr11:7444805-7444951 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 104-278 |
| Cow position: | chr11:15016811-15016979 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 104-306 |
| Cow position: | chr11:11469868-11469672 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 177, 58 |
| Conread position: | 108-253 |
| Cow position: | chr11:27722131-27722276 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 141, 67 |
| Conread position: | 108-272 |
| Cow position: | chr11:21728498-21728343 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 108-276 |
| Cow position: | chr11:33348415-33348248 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 109-274 |
| Cow position: | chr11:5526802-5526637 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 110-276 |
| Cow position: | chr11:18591662-18591496 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 110-293 |
| Cow position: | chr11:38874630-38874448 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 103, 15 |
| Conread position: | 114-246 |
| Cow position: | chr11:69810679-69810811 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-272 |
| Cow position: | chr11:61246681-61246529 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 116-276 |
| Cow position: | chr11:17660872-17661028 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 33 |
| Conread position: | 118-296 |
| Cow position: | chr11:21830573-21830396 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 60 |
| Conread position: | 120-287 |
| Cow position: | chr11:36238563-36238732 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 26 |
| Conread position: | 121-293 |
| Cow position: | chr11:65762814-65762647 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 122-293 |
| Cow position: | chr11:11557952-11558119 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 125-292 |
| Cow position: | chr11:36301295-36301123 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 127-289 |
| Cow position: | chr11:7574111-7574276 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 127-293 |
| Cow position: | chr11:65607905-65607736 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 131-287 |
| Cow position: | chr11:71493068-71492906 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 142 |
| Conread position: | 138-293 |
| Cow position: | chr11:47850826-47850981 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 145-288 |
| Cow position: | chr11:2874192-2874339 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 158-276 |
| Cow position: | chr11:30954815-30954935 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.