Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 2-276
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 157

Conread position: 3-262
Cow position:
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 64

Conread position: 5-241
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 29

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 91, 16

Conread position: 5-247
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 56, 157

Conread position: 5-252
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 140

Conread position: 5-252
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 243, 37

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 27

Conread position: 5-253
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 171

Conread position: 5-253
Cow position:
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 5-253
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-253
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 168

Conread position: 5-260
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 164

Conread position: 5-260
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 164

Conread position: 5-265
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 82, 37

Conread position: 5-267
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 56

Conread position: 5-268
Cow position:
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 37

Conread position: 5-271
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 37

Conread position: 5-273
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 264

Conread position: 5-276
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 244, 41

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 172

Conread position: 5-279
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 56, 36

Conread position: 5-285
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 106, 90

Conread position: 5-287
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 7

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 30

Conread position: 5-289
Cow position:
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 181

Conread position: 5-292
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 151

Conread position: 5-292
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 89, 43

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 263

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 268

Conread position: 5-294
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 88, 144

Conread position: 5-295
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 0

Conread position: 5-296
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 16

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 125

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 49

Conread position: 5-296
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 183

Conread position: 5-374
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 70

Conread position: 5-381
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 91, 37

Conread position: 6-253
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 243, 89

Conread position: 6-278
Cow position:
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 237

Conread position: 6-285
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 6-289
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 6-292
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 129

Conread position: 6-296
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 6-303
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 7-247
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 48

Conread position: 9-243
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 73

Conread position: 9-245
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 94

Conread position: 9-253
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 178

Conread position: 9-265
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 75

Conread position: 9-276
Cow position:
Alignm length: 273
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 138

Conread position: 9-285
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 87, 59

Conread position: 10-273
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 203, 8

Conread position: 13-290
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 145

Conread position: 15-273
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 14

Conread position: 17-293
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 76, 58

Conread position: 23-253
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 150

Conread position: 27-296
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 29-229
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 119

Conread position: 31-319
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 135

Conread position: 32-276
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 21

Conread position: 33-371
Cow position:
Alignm length: 344
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 9

Conread position: 34-296
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 42

Conread position: 41-289
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 58

Conread position: 42-253
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 23

Conread position: 46-296
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 49

Conread position: 48-247
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 116

Conread position: 51-371
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 45, 11

Conread position: 54-287
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 100

Conread position: 54-289
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 42, 131

Conread position: 54-296
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 111

Conread position: 54-305
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 195, 93

Conread position: 55-241
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 55-287
Cow position:
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 55-289
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 96

Conread position: 55-292
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 55-296
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 118

Conread position: 55-296
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 194, 42

Conread position: 60-293
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 120

Conread position: 62-266
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 115

Conread position: 62-293
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 35

Conread position: 62-304
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 187, 35

Conread position: 62-307
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 104

Conread position: 63-289
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 94

Conread position: 63-292
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 64-276
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 31

Conread position: 64-330
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 104

Conread position: 65-248
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 106

Conread position: 65-287
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 62

Conread position: 65-293
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 231

Conread position: 65-337
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 109

Conread position: 66-252
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 85

Conread position: 66-276
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 66-287
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 124

Conread position: 69-267
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 97

Conread position: 71-289
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 45

Conread position: 72-286
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 88

Conread position: 75-253
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 140, 27

Conread position: 77-247
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 18

Conread position: 77-276
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 77-293
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 77-293
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 80-286
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 69

Conread position: 80-293
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 169, 17

Conread position: 81-289
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 82-253
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 83-296
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 81

Conread position: 85-284
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 110

Conread position: 86-296
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 11

Conread position: 86-296
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 16, 162

Conread position: 87-253
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 68

Conread position: 87-273
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 98

Conread position: 99-312
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 150, 188

Conread position: 100-236
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 87

Conread position: 101-242
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 102-292
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 70

Conread position: 104-252
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 67

Conread position: 104-278
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 43

Conread position: 104-306
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 177, 58

Conread position: 108-253
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 141, 67

Conread position: 108-272
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 108-276
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 54

Conread position: 109-274
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 10

Conread position: 110-276
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 36

Conread position: 110-293
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 15

Conread position: 114-246
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 115-272
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 29

Conread position: 116-276
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 133, 33

Conread position: 118-296
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 60

Conread position: 120-287
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 26

Conread position: 121-293
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 128, 45

Conread position: 122-293
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 42

Conread position: 125-292
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 127-289
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 59

Conread position: 127-293
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 131-287
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 142

Conread position: 138-293
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 17

Conread position: 145-288
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 158-276
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.