Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 1-265
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 73

Conread position: 5-245
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 100, 185

Conread position: 5-247
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 157, 37

Conread position: 5-247
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 159

Conread position: 5-248
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 88, 154

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 72

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 60

Conread position: 5-253
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 141

Conread position: 5-256
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 47

Conread position: 5-256
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 15

Conread position: 5-260
Cow position:
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 65

Conread position: 5-262
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 31

Conread position: 5-265
Cow position:
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 5-268
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 5-274
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 37

Conread position: 5-275
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 89, 124

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 165

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 125

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 256

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 153

Conread position: 5-284
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 165

Conread position: 5-284
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 90

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 70

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 113, 90

Conread position: 5-285
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 91, 37

Conread position: 5-286
Cow position:
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 218

Conread position: 5-286
Cow position:
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 159

Conread position: 5-287
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 5-287
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 5-289
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-291
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 134

Conread position: 5-292
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 5-292
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 5-292
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 244, 37

Conread position: 5-292
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 244, 154

Conread position: 5-293
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 73

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 296

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 47

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 113

Conread position: 5-296
Cow position:
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 163

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 67

Conread position: 5-296
Cow position:
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 173

Conread position: 5-326
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 5-371
Cow position:
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 5-374
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 72

Conread position: 5-374
Cow position:
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 5-374
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 43

Conread position: 6-247
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 86, 166

Conread position: 6-261
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 48, 179

Conread position: 6-265
Cow position:
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 6-289
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 90, 29

Conread position: 6-292
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 89, 56

Conread position: 6-296
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 146

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 91

Conread position: 7-276
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 7-292
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 8-296
Cow position:
Alignm length: 300
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 9-274
Cow position:
Alignm length: 271
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 144

Conread position: 9-276
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 141

Conread position: 9-285
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 11, 121

Conread position: 9-293
Cow position:
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 10-287
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 11-276
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 143, 84

Conread position: 14-269
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 41

Conread position: 14-289
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 269

Conread position: 15-287
Cow position:
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 107

Conread position: 15-374
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 248, 26

Conread position: 18-252
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 152

Conread position: 26-293
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 149

Conread position: 27-294
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 74, 20

Conread position: 31-292
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 134

Conread position: 37-287
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 95

Conread position: 38-246
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 126

Conread position: 42-283
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 120

Conread position: 42-296
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 65

Conread position: 44-260
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 120

Conread position: 46-371
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 117

Conread position: 54-276
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 83

Conread position: 55-260
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 22

Conread position: 59-287
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 80

Conread position: 62-276
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 140

Conread position: 62-287
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 84

Conread position: 62-287
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 22

Conread position: 63-304
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 99

Conread position: 64-276
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 127

Conread position: 65-241
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 115

Conread position: 65-265
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 97

Conread position: 65-275
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 102

Conread position: 65-276
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 65-293
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 65-294
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 44

Conread position: 65-298
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 95

Conread position: 66-276
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 67-251
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 126

Conread position: 67-252
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 96

Conread position: 67-291
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 210

Conread position: 67-292
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 26, 106

Conread position: 67-296
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 183

Conread position: 67-305
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 68-276
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 50

Conread position: 68-293
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 82

Conread position: 69-223
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 82

Conread position: 70-243
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 73

Conread position: 70-293
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 87

Conread position: 70-293
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 26, 0

Conread position: 70-296
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 180, 27

Conread position: 71-287
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 78

Conread position: 71-371
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 16, 102

Conread position: 75-289
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 193

Conread position: 77-256
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 75

Conread position: 77-263
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 74

Conread position: 77-276
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 85

Conread position: 77-289
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 85

Conread position: 79-282
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 76

Conread position: 79-296
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 17, 94

Conread position: 80-247
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 90

Conread position: 80-286
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 70

Conread position: 80-288
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 81-268
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 83

Conread position: 82-262
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 44

Conread position: 84-287
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 165, 86

Conread position: 84-291
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 97

Conread position: 84-293
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 67

Conread position: 86-276
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 163, 0

Conread position: 97-374
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 194, 35

Conread position: 98-253
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 66

Conread position: 99-290
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 149, 54

Conread position: 99-313
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 101

Conread position: 101-253
Cow position:
Alignm length: 154
Alignm identity: 125
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 148, 0

Conread position: 101-279
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 66

Conread position: 104-293
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 104, 59

Conread position: 105-276
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 105-276
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 60

Conread position: 105-292
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 16

Conread position: 116-276
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 117-292
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 132, 45

Conread position: 118-285
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 120-290
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 129, 49

Conread position: 122-253
Cow position:
Alignm length: 133
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 124-293
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 40

Conread position: 127-239
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 128-275
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 137

Conread position: 130-277
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 149-296
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 100, 86

Show alignments to all cow chromosomes.