Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 5-241
Cow position: chr14:36775960-36775730 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 151

Conread position: 5-244
Cow position: chr14:21534687-21534913 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 37

Conread position: 5-247
Cow position: chr14:25779456-25779210 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 5-247
Cow position: chr14:29010603-29010358 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 5-247
Cow position: chr14:38169036-38168801 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 5-253
Cow position: chr14:43452820-43453073 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-256
Cow position: chr14:30592699-30592448 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 32

Conread position: 5-256
Cow position: chr14:34082799-34083044 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 37

Conread position: 5-256
Cow position: chr14:42918458-42918198 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 177

Conread position: 5-258
Cow position: chr14:24581295-24581031 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 187

Conread position: 5-268
Cow position: chr14:15054634-15054892 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 20

Conread position: 5-274
Cow position: chr14:7317196-7316918 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-276
Cow position: chr14:12483951-12484211 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 83

Conread position: 5-276
Cow position: chr14:20640261-20640538 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 5-276
Cow position: chr14:27591589-27591865 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 37

Conread position: 5-276
Cow position: chr14:34021045-34020776 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 88, 37

Conread position: 5-276
Cow position: chr14:34199483-34199760 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 37

Conread position: 5-284
Cow position: chr14:31734496-31734771 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 42

Conread position: 5-284
Cow position: chr14:41211229-41210935 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 259

Conread position: 5-285
Cow position: chr14:34345708-34345424 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 113, 90

Conread position: 5-286
Cow position: chr14:9020382-9020105 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 26

Conread position: 5-286
Cow position: chr14:48427436-48427151 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 5-287
Cow position: chr14:8495506-8495229 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 32

Conread position: 5-287
Cow position: chr14:21964476-21964196 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 50

Conread position: 5-287
Cow position: chr14:33828504-33828236 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 34

Conread position: 5-289
Cow position: chr14:17755919-17755636 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 162

Conread position: 5-289
Cow position: chr14:41479299-41479587 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 161

Conread position: 5-293
Cow position: chr14:20600741-20600457 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 91, 152

Conread position: 5-293
Cow position: chr14:40269481-40269774 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 142

Conread position: 5-293
Cow position: chr14:41749404-41749690 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 150

Conread position: 5-293
Cow position: chr14:43046501-43046217 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 42

Conread position: 5-296
Cow position: chr14:27312798-27312494 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 144

Conread position: 5-296
Cow position: chr14:36554796-36555090 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 40

Conread position: 5-296
Cow position: chr14:45605449-45605159 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 160

Conread position: 5-305
Cow position: chr14:22989394-22989095 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 168

Conread position: 5-305
Cow position: chr14:39769863-39770177 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 5-337
Cow position: chr14:8784535-8784207 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 6-260
Cow position: chr14:42330711-42330456 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 11

Conread position: 6-268
Cow position: chr14:41325080-41325340 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 6-285
Cow position: chr14:42154603-42154884 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 6-293
Cow position: chr14:44742028-44742314 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 202, 89

Conread position: 6-371
Cow position: chr14:18940952-18941308 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 94, 14

Conread position: 7-271
Cow position: chr14:20666667-20666930 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 85

Conread position: 9-276
Cow position: chr14:18904247-18904521 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 247

Conread position: 9-284
Cow position: chr14:20009962-20010229 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 50

Conread position: 9-284
Cow position: chr14:40230281-40230558 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 164

Conread position: 9-293
Cow position: chr14:33538573-33538852 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 85, 66

Conread position: 9-303
Cow position: chr14:27848556-27848262 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 164

Conread position: 10-265
Cow position: chr14:26620974-26620716 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 56

Conread position: 13-276
Cow position: chr14:41756610-41756348 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 83, 170

Conread position: 15-283
Cow position: chr14:40433272-40433001 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 9, 104

Conread position: 20-282
Cow position: chr14:17238707-17238436 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 71, 13

Conread position: 24-256
Cow position: chr14:18345393-18345625 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 18

Conread position: 37-253
Cow position: chr14:11641248-11641458 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 26

Conread position: 42-257
Cow position: chr14:24237141-24236931 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 55

Conread position: 42-305
Cow position: chr14:26880483-26880747 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 114

Conread position: 43-293
Cow position: chr14:37934288-37934543 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 9

Conread position: 54-253
Cow position: chr14:44878475-44878675 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 75

Conread position: 54-256
Cow position: chr14:23712997-23712796 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 112

Conread position: 55-256
Cow position: chr14:14187643-14187441 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 109

Conread position: 55-260
Cow position: chr14:15033066-15032865 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 110

Conread position: 55-278
Cow position: chr14:48412565-48412793 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 213

Conread position: 55-296
Cow position: chr14:5630473-5630228 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 119

Conread position: 56-291
Cow position: chr14:38379329-38379095 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 121

Conread position: 57-287
Cow position: chr14:33714380-33714601 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 99

Conread position: 57-287
Cow position: chr14:37131965-37131732 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 10

Conread position: 62-253
Cow position: chr14:34330842-34330656 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 96

Conread position: 62-268
Cow position: chr14:7482358-7482152 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 86

Conread position: 63-337
Cow position: chr14:33791491-33791199 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 64-296
Cow position: chr14:48740585-48740803 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 58

Conread position: 65-245
Cow position: chr14:5836204-5836022 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 103

Conread position: 66-293
Cow position: chr14:4109174-4109403 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 64

Conread position: 67-256
Cow position: chr14:35018458-35018646 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 29, 97

Conread position: 67-276
Cow position: chr14:11819826-11820034 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 99

Conread position: 69-286
Cow position: chr14:13810233-13810014 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 85

Conread position: 70-268
Cow position: chr14:14466185-14466380 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 93

Conread position: 72-253
Cow position: chr14:24922399-24922213 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 73-252
Cow position: chr14:47385927-47385756 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 60

Conread position: 77-276
Cow position: chr14:23464527-23464727 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 52

Conread position: 77-292
Cow position: chr14:43036166-43035955 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 77

Conread position: 82-276
Cow position: chr14:24786215-24786030 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 81

Conread position: 82-303
Cow position: chr14:39433977-39434196 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 63

Conread position: 85-304
Cow position: chr14:19129791-19129568 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 11, 95

Conread position: 86-276
Cow position: chr14:32452535-32452341 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 86-276
Cow position: chr14:37884134-37884323 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 162, 96

Conread position: 86-293
Cow position: chr14:17397326-17397528 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 78

Conread position: 89-256
Cow position: chr14:24839904-24840067 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 122, 24

Conread position: 99-253
Cow position: chr14:13846250-13846099 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 69

Conread position: 99-287
Cow position: chr14:29632619-29632807 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 183, 150

Conread position: 101-260
Cow position: chr14:47036538-47036692 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 101-276
Cow position: chr14:33309248-33309418 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 7

Conread position: 101-280
Cow position: chr14:17841025-17841204 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 45

Conread position: 101-381
Cow position: chr14:19372605-19372306 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 148, 71

Conread position: 102-371
Cow position: chr14:37890111-37889838 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 198

Conread position: 104-293
Cow position: chr14:28114924-28115113 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 145, 185

Conread position: 105-276
Cow position: chr14:24387709-24387537 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 0

Conread position: 105-313
Cow position: chr14:1645931-1646143 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 143, 0

Conread position: 108-284
Cow position: chr14:28004235-28004058 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 167

Conread position: 110-293
Cow position: chr14:6636639-6636824 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 113-304
Cow position: chr14:16033257-16033067 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 26

Conread position: 118-276
Cow position: chr14:8750319-8750164 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 130, 44

Conread position: 119-276
Cow position: chr14:13043005-13042845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 122-261
Cow position: chr14:20110479-20110619 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 129-286
Cow position: chr14:26490510-26490664 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 35

Conread position: 137-374
Cow position: chr14:20826698-20826464 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 29

Show alignments to all cow chromosomes.