Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 2-310
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 137

Conread position: 5-246
Cow position:
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-247
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 91, 63

Conread position: 5-247
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 37

Conread position: 5-247
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 100, 187

Conread position: 5-248
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 113

Conread position: 5-250
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 89, 37

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 157

Conread position: 5-253
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 134

Conread position: 5-257
Cow position:
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 5-260
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 146

Conread position: 5-271
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 198, 56

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 244, 37

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 244, 37

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 50

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 5-276
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 164

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 130

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 20

Conread position: 5-276
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 139

Conread position: 5-280
Cow position:
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 175

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 117, 29

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 113, 90

Conread position: 5-287
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 5-287
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 50

Conread position: 5-287
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 91, 37

Conread position: 5-288
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 94

Conread position: 5-289
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 232

Conread position: 5-291
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 113, 90

Conread position: 5-292
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 68

Conread position: 5-292
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 43

Conread position: 5-293
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 244, 77

Conread position: 5-293
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 163

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 92

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 91, 74

Conread position: 5-296
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 74

Conread position: 5-297
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 114, 28

Conread position: 5-376
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 88, 56

Conread position: 6-243
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 29

Conread position: 6-245
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 21

Conread position: 6-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 97, 89

Conread position: 6-285
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 89

Conread position: 6-292
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 73, 49

Conread position: 6-374
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 7-247
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 7-285
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 55

Conread position: 9-247
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 87, 156

Conread position: 10-379
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 68, 47

Conread position: 11-290
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 196, 7

Conread position: 11-337
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 153

Conread position: 14-254
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 234

Conread position: 15-273
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 157

Conread position: 28-327
Cow position:
Alignm length: 313
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 184, 67

Conread position: 30-292
Cow position:
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 218

Conread position: 31-293
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 151

Conread position: 32-296
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 120

Conread position: 33-381
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 234

Conread position: 40-292
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 21, 126

Conread position: 41-276
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 33

Conread position: 45-276
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 101

Conread position: 48-291
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 49-292
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 43

Conread position: 50-296
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 243

Conread position: 53-246
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 45, 12

Conread position: 54-247
Cow position:
Alignm length: 198
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 112

Conread position: 54-284
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 96

Conread position: 55-246
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 101

Conread position: 55-276
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 111

Conread position: 55-292
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 110

Conread position: 55-337
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 74

Conread position: 56-253
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 7

Conread position: 57-296
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 18

Conread position: 62-252
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 100

Conread position: 62-283
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 62-289
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 97

Conread position: 62-296
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 97

Conread position: 63-292
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 7

Conread position: 63-293
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 114

Conread position: 65-276
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 28

Conread position: 65-292
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 31, 220

Conread position: 67-276
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 200

Conread position: 72-287
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 177, 106

Conread position: 77-267
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 78

Conread position: 77-275
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 105

Conread position: 77-288
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 80-291
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 101

Conread position: 80-292
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 63

Conread position: 84-276
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 165, 11

Conread position: 84-301
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 80

Conread position: 86-252
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 86-284
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 11

Conread position: 99-268
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 44

Conread position: 99-276
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 150, 72

Conread position: 99-296
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 17

Conread position: 101-293
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 148, 53

Conread position: 104-253
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 95

Conread position: 104-296
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 107-289
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 47

Conread position: 108-262
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 150, 54

Conread position: 108-287
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 15

Conread position: 109-276
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 140, 19

Conread position: 110-247
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 54

Conread position: 118-274
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 118-293
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 126

Conread position: 118-302
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 160, 128

Conread position: 119-293
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 120-274
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 129-276
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 120, 63

Conread position: 179-374
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 60

Show alignments to all cow chromosomes.