Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 2-276
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 5-239
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 10

Conread position: 5-247
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 5-247
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 40

Conread position: 5-248
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 208, 22

Conread position: 5-252
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 75

Conread position: 5-253
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 159

Conread position: 5-256
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 89, 161

Conread position: 5-265
Cow position:
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 20

Conread position: 5-274
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 244, 20

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 32

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 134

Conread position: 5-276
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 136

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 49

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 146

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 87

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 174

Conread position: 5-284
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 264

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 92

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 106, 90

Conread position: 5-285
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 91, 18

Conread position: 5-286
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 122

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 22

Conread position: 5-287
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 179

Conread position: 5-288
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 5-289
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 47

Conread position: 5-289
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 160

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 10

Conread position: 5-293
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 44

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 5-293
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 154

Conread position: 5-294
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 92, 54

Conread position: 5-296
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 154

Conread position: 5-296
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 146

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 91, 13

Conread position: 5-304
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 244, 49

Conread position: 5-311
Cow position:
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 10

Conread position: 5-371
Cow position:
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 144

Conread position: 5-371
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 144

Conread position: 5-374
Cow position:
Alignm length: 378
Alignm identity: 252
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 202, 83

Conread position: 6-247
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 142

Conread position: 6-250
Cow position:
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 31

Conread position: 6-253
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 113

Conread position: 6-287
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 8-374
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 119

Conread position: 9-247
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 72

Conread position: 9-272
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 84

Conread position: 9-273
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 94, 86

Conread position: 9-286
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 152

Conread position: 10-265
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 91, 44

Conread position: 10-273
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 143

Conread position: 11-247
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 92, 84

Conread position: 13-260
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 27

Conread position: 13-287
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 87, 143

Conread position: 15-293
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 81, 103

Conread position: 16-247
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 18-292
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 93

Conread position: 20-285
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 76, 22

Conread position: 24-293
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 44

Conread position: 30-292
Cow position:
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 151

Conread position: 31-287
Cow position:
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 34-265
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 20

Conread position: 37-247
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 97

Conread position: 37-289
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 135

Conread position: 38-276
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 39

Conread position: 38-296
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 142

Conread position: 40-293
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 57

Conread position: 43-274
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 143

Conread position: 44-293
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 51

Conread position: 53-242
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 109

Conread position: 53-253
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 126

Conread position: 54-276
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 88

Conread position: 54-276
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 30

Conread position: 54-276
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 93

Conread position: 54-278
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 92

Conread position: 54-289
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 21

Conread position: 54-296
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 195, 43

Conread position: 55-253
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 54

Conread position: 55-289
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 57-275
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 122

Conread position: 62-289
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 33

Conread position: 62-293
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 62-374
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 33

Conread position: 64-310
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 65-247
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 107

Conread position: 65-265
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 99

Conread position: 65-275
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 184, 28

Conread position: 65-275
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 102

Conread position: 65-276
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 196

Conread position: 65-291
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 72

Conread position: 65-337
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 66-296
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 67-293
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 83

Conread position: 68-374
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 106

Conread position: 69-287
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 71-276
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 85

Conread position: 72-289
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 206, 23

Conread position: 77-256
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 87

Conread position: 77-288
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 85

Conread position: 77-296
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 24, 95

Conread position: 80-276
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 105

Conread position: 86-247
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 86-286
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 127, 92

Conread position: 86-289
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 136

Conread position: 88-276
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 99-268
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 71

Conread position: 99-294
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 161

Conread position: 102-286
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 102-289
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 147, 76

Conread position: 104-293
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 145, 54

Conread position: 104-293
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 145, 0

Conread position: 111-293
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 59

Conread position: 113-296
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 117-253
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 66

Conread position: 117-287
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 53

Conread position: 118-285
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 120-241
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 120-285
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 125-288
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 39

Show alignments to all cow chromosomes.