Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               2-311
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               4-337
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 175
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 171
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               5-246
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 188
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               50, 226
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               91, 159
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               72, 158
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               204, 120
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               244, 47
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 106
               

               Conread position:
               5-265
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               5-267
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 245
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               96, 145
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               89, 145
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 181
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               104, 90
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 90
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 286
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               91, 191
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 87
               

               Conread position:
               5-306
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               5-371
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 251
               

               Conread position:
               5-376
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               269, 87
               

               Conread position:
               6-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               6-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               6-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               94, 158
               

               Conread position:
               6-292
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               243, 36
               

               Conread position:
               6-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               99, 174
               

               Conread position:
               6-369
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 340
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               7-274
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               7-276
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               7-313
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               9-247
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               9-265
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               9-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               10-276
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               91, 125
               

               Conread position:
               11-257
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               11-371
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               14-276
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 106
               

               Conread position:
               18-276
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               51, 154
               

               Conread position:
               42-287
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 9
               

               Conread position:
               53-303
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               54-292
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               55-243
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               55-274
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 118
               

               Conread position:
               55-276
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               55-296
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               55-374
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               57-252
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               57-276
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               58-374
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               59-243
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               59-284
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               62-245
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 101
               

               Conread position:
               62-292
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               63-241
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               65-265
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               65-277
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 212
               

               Conread position:
               65-286
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               65-287
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               65-293
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               135, 32
               

               Conread position:
               65-293
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               184, 30
               

               Conread position:
               65-369
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               66-276
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               30, 100
               

               Conread position:
               67-276
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 118
               

               Conread position:
               67-291
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 28
               

               Conread position:
               68-291
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               72-340
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               73-293
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 198
               

               Conread position:
               77-274
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               83-246
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               99-288
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               99-296
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               150, 55
               

               Conread position:
               99-302
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               150, 85
               

               Conread position:
               104-292
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               174, 77
               

               Conread position:
               104-293
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               104-295
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               110-276
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               117-304
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               118-247
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               118-285
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               138-285
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               138-287
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 0
               
Show alignments to all cow chromosomes.