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Cow genome map

           
Conread name:
           
rpigcf0_004202.y1
        

               
Conread position:
               
5-241
               

               
Cow position:
               
chr2:43596486-43596249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr2:9687880-9687647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr2:45784420-45784654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr2:46227152-46227390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr2:71624692-71624456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr2:16513539-16513790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr2:1095590-1095830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
244, 136
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr2:17444463-17444723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr2:28820048-28820294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr2:76561795-76562041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr2:82656356-82656603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr2:1300696-1300454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr2:28711293-28711056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr2:44931576-44931326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr2:24435338-24435070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr2:34048451-34048182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
196, 179
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr2:6539553-6539286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:2673209-2673480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 92
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:14854007-14854269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:17940602-17940332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 111
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:24270908-24271187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:39662382-39662655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:42255115-42255390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:45259392-45259129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:56828884-56828614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 164
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:61974462-61974753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr2:82581246-82580977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr2:6038691-6038965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:31401763-31401481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:48895973-48896259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:73084604-73084323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr2:45499513-45499238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr2:82648119-82647854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
244, 16
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:31620313-31620029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:36007889-36007619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
244, 37
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:38628600-38628873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:44170240-44170524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 246
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:53649717-53649989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 32
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:64212874-64212592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:75561521-75561804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 273
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr2:80325163-80324886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr2:13543712-13543992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 92
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr2:44191168-44191445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 87
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr2:22055-21766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr2:76340982-76340689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr2:26439042-26438754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr2:29268748-29269030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr2:36073271-36072992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr2:56102782-56102494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 70
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr2:69747940-69747649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 170
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:549635-549357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:9591623-9591904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:36575417-36575712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
87, 179
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:42800735-42801016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 10
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:47066896-47066606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 169
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:52386238-52385945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:55632459-55632749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 190
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:67417322-67417028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr2:32417186-32416888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr2:2590258-2589974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr2:39815596-39815307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr2:50445578-50445874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr2:61485320-61485600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
95, 160
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr2:15815274-15815566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 239
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr2:42599609-42599915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr2:41451912-41452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr2:70703942-70704240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 28
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr2:31672962-31673327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
273, 33
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr2:31783628-31783998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr2:46201956-46202331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr2:18997422-18997795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 70
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr2:60956067-60956325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
243, 54
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr2:85339776-85339507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr2:46357533-46357805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr2:48069714-48069382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr2:39941178-39941544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 28
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr2:1352424-1352035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr2:14883969-14884230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr2:1073228-1073483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr2:37921092-37920816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 90
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr2:22254473-22254235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr2:11806007-11806277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr2:74260147-74260410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 125
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr2:36136696-36136984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 184
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr2:36104944-36105240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr2:13369348-13369631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr2:19212355-19212079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 154
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr2:15059374-15059087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr2:32114755-32115053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr2:81388380-81388629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr2:48617670-48617936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr2:33251381-33251161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
15-252
               

               
Cow position:
               
chr2:70945092-70945334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
15-340
               

               
Cow position:
               
chr2:76969484-76969151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 248
               

               
Conread position:
               
17-374
               

               
Cow position:
               
chr2:43609394-43609049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
18-274
               

               
Cow position:
               
chr2:48232735-48232480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
27-290
               

               
Cow position:
               
chr2:15568479-15568213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
29-292
               

               
Cow position:
               
chr2:63274252-63273976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 232
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr2:21356143-21355904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
33-289
               

               
Cow position:
               
chr2:38886939-38886666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr2:41019488-41019271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
37-246
               

               
Cow position:
               
chr2:41710597-41710799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
40-252
               

               
Cow position:
               
chr2:42607790-42607996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
40-289
               

               
Cow position:
               
chr2:57939402-57939647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
42-256
               

               
Cow position:
               
chr2:41185192-41185408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
42-279
               

               
Cow position:
               
chr2:71163993-71163757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
54-248
               

               
Cow position:
               
chr2:41157696-41157899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
54-256
               

               
Cow position:
               
chr2:2688908-2689101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr2:47138570-47138793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
54-276
               

               
Cow position:
               
chr2:24434552-24434328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
54-276
               

               
Cow position:
               
chr2:42927718-42927493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
54-276
               

               
Cow position:
               
chr2:42938567-42938345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
54-287
               

               
Cow position:
               
chr2:16422287-16422519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
54-289
               

               
Cow position:
               
chr2:77377969-77378213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
55-247
               

               
Cow position:
               
chr2:14710372-14710182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr2:46189356-46189134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
194, 107
               

               
Conread position:
               
55-289
               

               
Cow position:
               
chr2:6356655-6356413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
55-293
               

               
Cow position:
               
chr2:45469738-45469979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 122
               

               
Conread position:
               
55-296
               

               
Cow position:
               
chr2:13354409-13354653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr2:39068043-39068354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
56-268
               

               
Cow position:
               
chr2:57393560-57393347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
59-289
               

               
Cow position:
               
chr2:41088387-41088146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
62-288
               

               
Cow position:
               
chr2:25597752-25597528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
62-292
               

               
Cow position:
               
chr2:27173108-27173341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
62-296
               

               
Cow position:
               
chr2:32048229-32048457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
62-304
               

               
Cow position:
               
chr2:17967292-17967046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr2:41954621-41954838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
63-282
               

               
Cow position:
               
chr2:1755779-1755995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
64-245
               

               
Cow position:
               
chr2:19287334-19287155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
64-253
               

               
Cow position:
               
chr2:37347543-37347731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
65-243
               

               
Cow position:
               
chr2:80178019-80177841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
65-268
               

               
Cow position:
               
chr2:42872011-42872217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
65-272
               

               
Cow position:
               
chr2:46995008-46994805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
65-276
               

               
Cow position:
               
chr2:51594509-51594718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
65-286
               

               
Cow position:
               
chr2:80839386-80839170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
65-292
               

               
Cow position:
               
chr2:80797419-80797640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
65-296
               

               
Cow position:
               
chr2:62744263-62744036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr2:42309809-42309586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr2:82957421-82957632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
67-286
               

               
Cow position:
               
chr2:45665779-45665996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
182, 97
               

               
Conread position:
               
67-287
               

               
Cow position:
               
chr2:1658245-1658460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
68-293
               

               
Cow position:
               
chr2:62685383-62685608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
69-246
               

               
Cow position:
               
chr2:21383109-21382930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
69-247
               

               
Cow position:
               
chr2:45485219-45485042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
71-253
               

               
Cow position:
               
chr2:1203430-1203616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
73-289
               

               
Cow position:
               
chr2:14555999-14555782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
73-293
               

               
Cow position:
               
chr2:25964733-25964514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
77-252
               

               
Cow position:
               
chr2:44551078-44550908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
77-268
               

               
Cow position:
               
chr2:6697734-6697549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
77-276
               

               
Cow position:
               
chr2:46330812-46331014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
77-276
               

               
Cow position:
               
chr2:53851189-53851390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
77-279
               

               
Cow position:
               
chr2:80904169-80903970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
80-256
               

               
Cow position:
               
chr2:66480419-66480254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
169, 19
               

               
Conread position:
               
80-296
               

               
Cow position:
               
chr2:46020668-46020882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
81-296
               

               
Cow position:
               
chr2:81349121-81348906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
82-290
               

               
Cow position:
               
chr2:17114975-17114762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr2:11599202-11599456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
84-276
               

               
Cow position:
               
chr2:15249946-15250133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
86-252
               

               
Cow position:
               
chr2:36017645-36017486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
86-265
               

               
Cow position:
               
chr2:69770270-69770446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
163, 77
               

               
Conread position:
               
86-275
               

               
Cow position:
               
chr2:13604232-13604421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
163, 91
               

               
Conread position:
               
86-289
               

               
Cow position:
               
chr2:85281345-85281150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr2:60463047-60462847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr2:60468426-60468226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
96-305
               

               
Cow position:
               
chr2:38362595-38362384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
152, 168
               

               
Conread position:
               
97-289
               

               
Cow position:
               
chr2:68716891-68716701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
99-247
               

               
Cow position:
               
chr2:44229910-44229763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
99-276
               

               
Cow position:
               
chr2:1134614-1134435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
99-280
               

               
Cow position:
               
chr2:15329182-15329349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr2:20933576-20933753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 55
               

               
Conread position:
               
101-276
               

               
Cow position:
               
chr2:41461145-41461320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 149
               

               
Conread position:
               
104-284
               

               
Cow position:
               
chr2:44051088-44051273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
104-289
               

               
Cow position:
               
chr2:29159687-29159877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
105-246
               

               
Cow position:
               
chr2:69823373-69823511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
108-289
               

               
Cow position:
               
chr2:44232666-44232480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr2:16564472-16564661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
111-333
               

               
Cow position:
               
chr2:31529304-31529519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
117-285
               

               
Cow position:
               
chr2:71622254-71622085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
118-289
               

               
Cow position:
               
chr2:16505678-16505505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
118-289
               

               
Cow position:
               
chr2:43789904-43790067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
118-292
               

               
Cow position:
               
chr2:40488610-40488782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
118-293
               

               
Cow position:
               
chr2:4655301-4655126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
130, 171
               

               
Conread position:
               
121-287
               

               
Cow position:
               
chr2:1638400-1638568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
124-273
               

               
Cow position:
               
chr2:17493518-17493368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
125-287
               

               
Cow position:
               
chr2:827805-827648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
127-273
               

               
Cow position:
               
chr2:47152731-47152582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
128-298
               

               
Cow position:
               
chr2:46353685-46353518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr2:1762600-1762757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 132
               
Show alignments to all cow chromosomes.