Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               2-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               96, 160
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               244, 36
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 168
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 245
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 120
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 72
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 22
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 231
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 164
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 195
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               91, 146
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               208, 28
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               91, 136
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-336
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               5-374
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               6-247
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               6-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               6-381
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               242, 8
               

               Conread position:
               7-374
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 166
               

               Conread position:
               9-247
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               95, 133
               

               Conread position:
               9-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               10-263
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               11-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               85, 12
               

               Conread position:
               11-294
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               85, 143
               

               Conread position:
               12-268
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               43, 142
               

               Conread position:
               13-288
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               15-247
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               22-268
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 34
               

               Conread position:
               29-245
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               41-273
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               54-286
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               54-293
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               55-265
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 113
               

               Conread position:
               55-286
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               55-289
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 112
               

               Conread position:
               55-293
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               158, 44
               

               Conread position:
               55-326
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               41, 108
               

               Conread position:
               56-289
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 39
               

               Conread position:
               62-293
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               62-381
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               65-276
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               65-291
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               65-296
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               66-287
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               67-246
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               67-247
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               67-310
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               68-274
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               70-280
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               177, 27
               

               Conread position:
               70-292
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               81-268
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               81-285
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               83-253
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               83-293
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               85-371
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 14
               

               Conread position:
               86-265
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               86-276
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               86-374
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               87-276
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               162, 21
               

               Conread position:
               99-273
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               150, 79
               

               Conread position:
               104-286
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               145, 30
               

               Conread position:
               104-373
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               145, 208
               

               Conread position:
               108-291
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               109-283
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               114-288
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               118-276
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               122-286
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               124-292
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               125, 81
               

               Conread position:
               128-276
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 107
               

               Conread position:
               131-247
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.