Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 1-262
Cow position:
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 168

Conread position: 5-240
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-247
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 10

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 62, 161

Conread position: 5-248
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 174

Conread position: 5-252
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 91, 62

Conread position: 5-253
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 29

Conread position: 5-253
Cow position:
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 5-253
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 84, 37

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 144

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 88, 56

Conread position: 5-262
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 73

Conread position: 5-265
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 211, 87

Conread position: 5-265
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 22

Conread position: 5-271
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 155

Conread position: 5-274
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 90

Conread position: 5-274
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 51

Conread position: 5-274
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 93

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 96, 173

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 29

Conread position: 5-276
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 118

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 49

Conread position: 5-276
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 46

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 154

Conread position: 5-277
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 19, 131

Conread position: 5-284
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 105

Conread position: 5-284
Cow position:
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 35

Conread position: 5-285
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 5-286
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 207, 94

Conread position: 5-288
Cow position:
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 5-289
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 124

Conread position: 5-289
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 197

Conread position: 5-289
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 169

Conread position: 5-289
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 5-290
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 102

Conread position: 5-291
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 196, 50

Conread position: 5-292
Cow position:
Alignm length: 292
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 91, 18

Conread position: 5-292
Cow position:
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 63

Conread position: 5-292
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 88

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 44

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 47

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 90, 159

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 154

Conread position: 5-296
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 90, 64

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 84, 30

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 89, 43

Conread position: 5-296
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 5-296
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 168

Conread position: 5-303
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 20

Conread position: 5-303
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 284

Conread position: 5-337
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 90

Conread position: 5-337
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 40

Conread position: 5-368
Cow position:
Alignm length: 370
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 51

Conread position: 5-370
Cow position:
Alignm length: 389
Alignm identity: 252
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 150

Conread position: 5-377
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 179

Conread position: 5-381
Cow position:
Alignm length: 386
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 148

Conread position: 6-265
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 104

Conread position: 6-276
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 6-290
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 39

Conread position: 6-290
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 7-253
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 156

Conread position: 7-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 28

Conread position: 7-276
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 134

Conread position: 7-293
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 58

Conread position: 7-322
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 89, 192

Conread position: 9-253
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 87, 58

Conread position: 9-292
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 28

Conread position: 9-293
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 165

Conread position: 9-295
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 48

Conread position: 9-374
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 11-253
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 152

Conread position: 13-276
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 153

Conread position: 14-268
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 145

Conread position: 15-247
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 24-247
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 27-263
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 166

Conread position: 34-294
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 64, 81

Conread position: 37-247
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 42-273
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 47

Conread position: 42-287
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 54, 30

Conread position: 42-292
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 19

Conread position: 47-293
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 120

Conread position: 54-247
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 41

Conread position: 54-258
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 112

Conread position: 54-296
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 113

Conread position: 54-296
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 55-241
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 121

Conread position: 55-245
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 105

Conread position: 55-253
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 57

Conread position: 55-276
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 115

Conread position: 55-293
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 56-287
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 86

Conread position: 57-292
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 205

Conread position: 62-276
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 57

Conread position: 62-289
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 8

Conread position: 62-292
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 62-374
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 65

Conread position: 63-253
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 65-253
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 136, 32

Conread position: 65-276
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 36

Conread position: 65-276
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 65-293
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 108

Conread position: 67-374
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 72

Conread position: 69-262
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 43

Conread position: 69-275
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 119

Conread position: 69-279
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 180, 26

Conread position: 69-302
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 98

Conread position: 77-262
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 86

Conread position: 77-294
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 103

Conread position: 77-305
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 80-276
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 34

Conread position: 80-292
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 94

Conread position: 81-287
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 78

Conread position: 82-293
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 127, 13

Conread position: 83-247
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 103

Conread position: 99-315
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 18

Conread position: 100-276
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 24

Conread position: 102-276
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 104-293
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 15

Conread position: 108-247
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 110-285
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 38

Conread position: 112-287
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 137, 24

Conread position: 118-285
Cow position:
Alignm length: 169
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 118-288
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 47

Conread position: 118-293
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 131, 80

Conread position: 119-292
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 49

Conread position: 120-274
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 121-304
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 27

Conread position: 128-305
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 26

Conread position: 130-371
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 157

Show alignments to all cow chromosomes.