Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 1-262 |
| Cow position: | chr21:40058549-40058806 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 168 |
| Conread position: | 5-240 |
| Cow position: | chr21:43631445-43631219 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-247 |
| Cow position: | chr21:24607132-24607378 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-247 |
| Cow position: | chr21:31159002-31159250 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 5-247 |
| Cow position: | chr21:44252081-44251848 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 161 |
| Conread position: | 5-248 |
| Cow position: | chr21:21223031-21223281 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 49, 174 |
| Conread position: | 5-252 |
| Cow position: | chr21:35897874-35897640 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 5-253 |
| Cow position: | chr21:17410908-17410662 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 5-253 |
| Cow position: | chr21:19196421-19196168 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 5-253 |
| Cow position: | chr21:30231953-30231697 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 5-253 |
| Cow position: | chr21:30990521-30990278 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 144 |
| Conread position: | 5-253 |
| Cow position: | chr21:33263598-33263841 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 5-262 |
| Cow position: | chr21:25536742-25537002 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 5-265 |
| Cow position: | chr21:18932239-18932492 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 211, 87 |
| Conread position: | 5-265 |
| Cow position: | chr21:43240606-43240873 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 5-271 |
| Cow position: | chr21:23683297-23683560 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 155 |
| Conread position: | 5-274 |
| Cow position: | chr21:16696117-16696384 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-274 |
| Cow position: | chr21:20329090-20329359 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 5-274 |
| Cow position: | chr21:39401347-39401609 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 93 |
| Conread position: | 5-276 |
| Cow position: | chr21:10727028-10727294 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 96, 173 |
| Conread position: | 5-276 |
| Cow position: | chr21:17434573-17434301 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 5-276 |
| Cow position: | chr21:30849197-30848931 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 5-276 |
| Cow position: | chr21:32237047-32237312 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 5-276 |
| Cow position: | chr21:33562761-33563027 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 46 |
| Conread position: | 5-276 |
| Cow position: | chr21:33997478-33997212 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 5-277 |
| Cow position: | chr21:33419969-33419705 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 5-284 |
| Cow position: | chr21:7564575-7564292 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 105 |
| Conread position: | 5-284 |
| Cow position: | chr21:46263924-46264197 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 5-285 |
| Cow position: | chr21:34909938-34910222 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 5-285 |
| Cow position: | chr21:45841926-45841640 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 5-286 |
| Cow position: | chr21:46912291-46912567 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 207, 94 |
| Conread position: | 5-288 |
| Cow position: | chr21:725143-724855 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 5-289 |
| Cow position: | chr21:641331-641618 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 124 |
| Conread position: | 5-289 |
| Cow position: | chr21:11645238-11644939 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 197 |
| Conread position: | 5-289 |
| Cow position: | chr21:38120850-38121131 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 169 |
| Conread position: | 5-289 |
| Cow position: | chr21:42170377-42170668 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-290 |
| Cow position: | chr21:12961166-12960868 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 5-291 |
| Cow position: | chr21:4585602-4585330 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 196, 50 |
| Conread position: | 5-292 |
| Cow position: | chr21:16188048-16187774 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 5-292 |
| Cow position: | chr21:29069581-29069295 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 63 |
| Conread position: | 5-292 |
| Cow position: | chr21:32297755-32297473 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 88 |
| Conread position: | 5-293 |
| Cow position: | chr21:22719033-22718748 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 44 |
| Conread position: | 5-293 |
| Cow position: | chr21:28881896-28882171 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 5-293 |
| Cow position: | chr21:31691228-31691517 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 5-293 |
| Cow position: | chr21:34658781-34659068 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 90, 159 |
| Conread position: | 5-293 |
| Cow position: | chr21:39888997-39888711 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 5-296 |
| Cow position: | chr21:1463980-1464267 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 5-296 |
| Cow position: | chr21:5898648-5898361 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 5-296 |
| Cow position: | chr21:18289410-18289700 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 5-296 |
| Cow position: | chr21:34391219-34390937 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 5-296 |
| Cow position: | chr21:36795347-36795639 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 168 |
| Conread position: | 5-303 |
| Cow position: | chr21:18494725-18495013 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 5-303 |
| Cow position: | chr21:41974632-41974332 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 284 |
| Conread position: | 5-337 |
| Cow position: | chr21:23821915-23822250 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-337 |
| Cow position: | chr21:33209946-33210283 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 5-368 |
| Cow position: | chr21:42023882-42024234 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 5-370 |
| Cow position: | chr21:45151884-45151501 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 5-377 |
| Cow position: | chr21:28442481-28442867 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 179 |
| Conread position: | 5-381 |
| Cow position: | chr21:25344625-25345000 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 91, 148 |
| Conread position: | 6-265 |
| Cow position: | chr21:11639768-11640028 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 104 |
| Conread position: | 6-276 |
| Cow position: | chr21:32535726-32535992 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 6-290 |
| Cow position: | chr21:24222793-24222505 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 6-290 |
| Cow position: | chr21:43357513-43357226 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 109 |
| Conread position: | 7-253 |
| Cow position: | chr21:20925757-20925512 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 156 |
| Conread position: | 7-253 |
| Cow position: | chr21:21968066-21968311 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 7-276 |
| Cow position: | chr21:25382747-25383031 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 7-293 |
| Cow position: | chr21:395627-395906 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 7-322 |
| Cow position: | chr21:7132713-7132398 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 89, 192 |
| Conread position: | 9-253 |
| Cow position: | chr21:5566742-5566994 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 9-292 |
| Cow position: | chr21:912213-911933 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 9-293 |
| Cow position: | chr21:36793633-36793929 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 9-295 |
| Cow position: | chr21:10514563-10514839 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 9-374 |
| Cow position: | chr21:81821-82199 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 11-253 |
| Cow position: | chr21:24130834-24131075 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 13-276 |
| Cow position: | chr21:8985304-8985563 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 14-268 |
| Cow position: | chr21:5636965-5636709 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 145 |
| Conread position: | 15-247 |
| Cow position: | chr21:19957987-19958213 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 24-247 |
| Cow position: | chr21:18935528-18935748 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 27-263 |
| Cow position: | chr21:17714082-17714322 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 166 |
| Conread position: | 34-294 |
| Cow position: | chr21:28626017-28626274 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 37-247 |
| Cow position: | chr21:24797474-24797674 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 42-273 |
| Cow position: | chr21:19083820-19083581 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 42-287 |
| Cow position: | chr21:30592514-30592277 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 42-292 |
| Cow position: | chr21:31676286-31676532 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 47-293 |
| Cow position: | chr21:13365130-13365375 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 54-247 |
| Cow position: | chr21:7067840-7068040 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 54-258 |
| Cow position: | chr21:6051302-6051503 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 54-296 |
| Cow position: | chr21:29484780-29485017 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 113 |
| Conread position: | 54-296 |
| Cow position: | chr21:40133951-40134197 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 55-241 |
| Cow position: | chr21:14464374-14464571 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 121 |
| Conread position: | 55-245 |
| Cow position: | chr21:48108070-48107878 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 55-253 |
| Cow position: | chr21:34835626-34835440 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 55-276 |
| Cow position: | chr21:45355633-45355852 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 115 |
| Conread position: | 55-293 |
| Cow position: | chr21:29002365-29002123 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 56-287 |
| Cow position: | chr21:47067089-47066870 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 57-292 |
| Cow position: | chr21:28443580-28443343 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 32, 205 |
| Conread position: | 62-276 |
| Cow position: | chr21:18845211-18844998 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 62-289 |
| Cow position: | chr21:17428308-17428528 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 62-292 |
| Cow position: | chr21:42135820-42135586 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 62-374 |
| Cow position: | chr21:21077133-21077441 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 63-253 |
| Cow position: | chr21:13738376-13738560 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 65-253 |
| Cow position: | chr21:13163700-13163885 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 136, 32 |
| Conread position: | 65-276 |
| Cow position: | chr21:1591358-1591569 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 65-276 |
| Cow position: | chr21:31253342-31253561 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 65-293 |
| Cow position: | chr21:42145723-42145948 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 67-374 |
| Cow position: | chr21:32559545-32559233 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 69-262 |
| Cow position: | chr21:22353419-22353228 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 69-275 |
| Cow position: | chr21:47764301-47764099 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 69-279 |
| Cow position: | chr21:2785966-2785757 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 180, 26 |
| Conread position: | 69-302 |
| Cow position: | chr21:22860813-22861043 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 77-262 |
| Cow position: | chr21:46829450-46829266 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 77-294 |
| Cow position: | chr21:13488338-13488556 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 77-305 |
| Cow position: | chr21:18800706-18800490 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 80-276 |
| Cow position: | chr21:17183743-17183940 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 80-292 |
| Cow position: | chr21:27146172-27145955 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 94 |
| Conread position: | 81-287 |
| Cow position: | chr21:18790733-18790528 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 82-293 |
| Cow position: | chr21:10000908-10001111 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 127, 13 |
| Conread position: | 83-247 |
| Cow position: | chr21:49353026-49353189 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 99-315 |
| Cow position: | chr21:27624555-27624763 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 100-276 |
| Cow position: | chr21:31511137-31511303 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 102-276 |
| Cow position: | chr21:24642364-24642537 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 104-293 |
| Cow position: | chr21:14515695-14515885 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 108-247 |
| Cow position: | chr21:10421104-10420969 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 110-285 |
| Cow position: | chr21:18041989-18041821 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 112-287 |
| Cow position: | chr21:35354393-35354562 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 118-285 |
| Cow position: | chr21:32830457-32830625 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 118-288 |
| Cow position: | chr21:12462109-12461940 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 118-293 |
| Cow position: | chr21:11359899-11360072 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 131, 80 |
| Conread position: | 119-292 |
| Cow position: | chr21:20152810-20152989 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 120-274 |
| Cow position: | chr21:17875332-17875176 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 121-304 |
| Cow position: | chr21:20260456-20260275 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 128-305 |
| Cow position: | chr21:20192774-20192946 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 130-371 |
| Cow position: | chr21:27810278-27810516 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 119, 157 |
Show alignments to all cow chromosomes.