Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               5-246
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 95
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 75
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               5-265
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 251
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 135
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               62, 128
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 260
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 60
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 166
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               91, 72
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               205, 73
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 115
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               91, 151
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 156
               

               Conread position:
               5-303
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               6-292
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 129
               

               Conread position:
               6-371
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               6-374
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 343
               

               Conread position:
               7-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               10-284
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               11-302
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               14-293
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               18-296
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               82, 54
               

               Conread position:
               19-292
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 151
               

               Conread position:
               20-287
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 138
               

               Conread position:
               24-289
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               26-276
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               223, 128
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               70, 131
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               69, 222
               

               Conread position:
               42-253
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               45-276
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 129
               

               Conread position:
               50-293
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               54-276
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 96
               

               Conread position:
               54-303
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               55-289
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               40, 75
               

               Conread position:
               58-292
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               62-292
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               63-292
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               65-247
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               30, 136
               

               Conread position:
               65-268
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               65-289
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 182
               

               Conread position:
               66-296
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               67-248
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               70-253
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               72-252
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               83-276
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               6, 83
               

               Conread position:
               85-305
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               86-276
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               161, 57
               

               Conread position:
               87-247
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               90-371
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               99-372
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               150, 49
               

               Conread position:
               100-296
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               100-296
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               101-260
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               115, 53
               

               Conread position:
               106-284
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               107-262
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 97
               

               Conread position:
               108-262
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-292
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               111-292
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               139, 67
               

               Conread position:
               116-292
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               118-268
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.