Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 168
               

               Conread position:
               5-275
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               87, 158
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 178
               

               Conread position:
               5-282
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               244, 37
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 136
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 161
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               104, 90
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 165
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 169
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               5-370
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               5-371
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               5-376
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               6-289
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 55
               

               Conread position:
               6-371
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 153
               

               Conread position:
               9-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               10-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               11-337
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 162
               

               Conread position:
               13-293
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               80, 29
               

               Conread position:
               17-276
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               128, 78
               

               Conread position:
               18-275
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 107
               

               Conread position:
               19-293
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               81, 152
               

               Conread position:
               22-274
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               27-293
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 118
               

               Conread position:
               29-290
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               45-293
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               167, 54
               

               Conread position:
               47-263
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               53-276
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 85
               

               Conread position:
               55-247
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               55-289
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 104
               

               Conread position:
               55-293
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               57-276
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               192, 38
               

               Conread position:
               57-289
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 116
               

               Conread position:
               59-276
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               59-311
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               28, 243
               

               Conread position:
               62-265
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               65-285
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               65-374
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               66-293
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               67-284
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               67-293
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 185
               

               Conread position:
               69-292
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               71-275
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 28
               

               Conread position:
               77-289
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               80-289
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               80-289
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               82-266
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               89-288
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 9
               

               Conread position:
               107-247
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               110-276
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               139, 60
               

               Conread position:
               113-292
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               121-276
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               128, 119
               

               Conread position:
               122-374
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               126, 165
               

               Conread position:
               125-337
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               151-287
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 0
               
Show alignments to all cow chromosomes.