Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 1-293 |
| Cow position: | chr26:16549679-16549974 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 5-247 |
| Cow position: | chr26:2531474-2531240 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 62 |
| Conread position: | 5-247 |
| Cow position: | chr26:27063970-27063729 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 197, 157 |
| Conread position: | 5-252 |
| Cow position: | chr26:26671042-26670801 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 90 |
| Conread position: | 5-253 |
| Cow position: | chr26:7525778-7525523 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 161 |
| Conread position: | 5-256 |
| Cow position: | chr26:9604242-9604509 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 178 |
| Conread position: | 5-285 |
| Cow position: | chr26:6463454-6463737 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 113, 9 |
| Conread position: | 5-285 |
| Cow position: | chr26:11815006-11814723 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 5-285 |
| Cow position: | chr26:12584301-12584021 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 177, 90 |
| Conread position: | 5-285 |
| Cow position: | chr26:34086702-34086987 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 5-287 |
| Cow position: | chr26:22116423-22116705 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 89, 176 |
| Conread position: | 5-289 |
| Cow position: | chr26:6422345-6422057 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 104, 90 |
| Conread position: | 5-289 |
| Cow position: | chr26:6475726-6475445 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 5-291 |
| Cow position: | chr26:32955920-32955646 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 5-292 |
| Cow position: | chr26:27491802-27491514 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 63 |
| Conread position: | 5-293 |
| Cow position: | chr26:23926278-23925996 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 5-293 |
| Cow position: | chr26:25737171-25737461 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 89, 159 |
| Conread position: | 5-296 |
| Cow position: | chr26:32653029-32652745 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 5-337 |
| Cow position: | chr26:20256545-20256879 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 56, 125 |
| Conread position: | 9-276 |
| Cow position: | chr26:7961336-7961602 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 10-292 |
| Cow position: | chr26:34108476-34108746 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 239, 89 |
| Conread position: | 14-286 |
| Cow position: | chr26:6188005-6188272 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 82, 133 |
| Conread position: | 14-286 |
| Cow position: | chr26:6447898-6447619 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-292 |
| Cow position: | chr26:9491641-9491911 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 18-293 |
| Cow position: | chr26:33112667-33112393 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 23-293 |
| Cow position: | chr26:32013348-32013617 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 70, 137 |
| Conread position: | 33-288 |
| Cow position: | chr26:1329272-1329528 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 34-247 |
| Cow position: | chr26:26466989-26466781 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 37-296 |
| Cow position: | chr26:2029821-2029550 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 42-247 |
| Cow position: | chr26:32058390-32058596 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 51-292 |
| Cow position: | chr26:34314424-34314678 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 53-296 |
| Cow position: | chr26:32898123-32897880 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 54-276 |
| Cow position: | chr26:20846372-20846595 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 197 |
| Conread position: | 55-289 |
| Cow position: | chr26:26294438-26294212 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 55-296 |
| Cow position: | chr26:613923-613687 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 59-287 |
| Cow position: | chr26:35704139-35704369 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 193 |
| Conread position: | 63-375 |
| Cow position: | chr26:8810890-8811213 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 66-241 |
| Cow position: | chr26:23097416-23097243 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 66-253 |
| Cow position: | chr26:6793702-6793890 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 66-283 |
| Cow position: | chr26:17385536-17385753 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 67-371 |
| Cow position: | chr26:30034643-30034336 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 71-296 |
| Cow position: | chr26:6793906-6794138 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 197 |
| Conread position: | 73-253 |
| Cow position: | chr26:21242872-21243049 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 79-293 |
| Cow position: | chr26:15200742-15200526 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 82-276 |
| Cow position: | chr26:28243842-28243649 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 83-296 |
| Cow position: | chr26:30254856-30254639 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 192 |
| Conread position: | 88-296 |
| Cow position: | chr26:31605192-31605396 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 161, 61 |
| Conread position: | 99-253 |
| Cow position: | chr26:25526042-25526194 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 148, 79 |
| Conread position: | 99-285 |
| Cow position: | chr26:30128223-30128042 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 179, 72 |
| Conread position: | 111-294 |
| Cow position: | chr26:17148508-17148693 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 115-293 |
| Cow position: | chr26:6252659-6252840 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 118-298 |
| Cow position: | chr26:12821084-12821267 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 122-265 |
| Cow position: | chr26:27761830-27761689 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 139-285 |
| Cow position: | chr26:15373206-15373058 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 163-292 |
| Cow position: | chr26:12964841-12964709 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.