Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               197, 157
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 90
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 161
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               177, 90
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               89, 176
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               104, 90
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 63
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               89, 159
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               5-337
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               9-276
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               54, 157
               

               Conread position:
               10-292
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               239, 89
               

               Conread position:
               14-286
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               82, 133
               

               Conread position:
               14-286
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               15-292
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               18-293
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               23-293
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               70, 137
               

               Conread position:
               33-288
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               34-247
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               37-296
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               42-247
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               51-292
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               53-296
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               54-276
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               42, 197
               

               Conread position:
               55-289
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               55-296
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 119
               

               Conread position:
               59-287
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 193
               

               Conread position:
               63-375
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               66-241
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               66-253
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               66-283
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               67-371
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               71-296
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 197
               

               Conread position:
               73-253
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               79-293
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               82-276
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               83-296
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 192
               

               Conread position:
               88-296
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               99-253
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               148, 79
               

               Conread position:
               99-285
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               179, 72
               

               Conread position:
               111-294
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               115-293
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               118-298
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               122-265
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               139-285
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               163-292
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.