Cow genome map


           Conread name:
           rpigcf0_004202.y1
        

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               128, 70
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               91, 159
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 143
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               244, 88
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               5-265
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               203, 0
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 174
               

               Conread position:
               5-274
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 90
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 72
               

               Conread position:
               5-284
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               91, 43
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               113, 90
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 164
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 178
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 186
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               273, 106
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               5-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               5-304
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 297
               

               Conread position:
               5-311
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               5-370
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-285
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 157
               

               Conread position:
               6-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               9-260
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 109
               

               Conread position:
               11-296
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               12-293
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               14-247
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               18-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 234
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               21-289
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 74
               

               Conread position:
               38-289
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 121
               

               Conread position:
               39-274
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               42-371
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               45-285
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 157
               

               Conread position:
               55-325
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               57-293
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               39, 231
               

               Conread position:
               62-293
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               62-301
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               62-370
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               62-376
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               32, 102
               

               Conread position:
               64-276
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               65-253
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               182, 89
               

               Conread position:
               65-292
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               184, 34
               

               Conread position:
               66-256
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               67-291
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               71-293
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               207, 22
               

               Conread position:
               72-297
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               177, 23
               

               Conread position:
               73-292
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               77-285
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               77-294
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 173
               

               Conread position:
               77-302
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               78-297
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               80-276
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               132, 82
               

               Conread position:
               80-279
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               80-296
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               84-293
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               85-292
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               123, 77
               

               Conread position:
               86-245
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               86-287
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               162, 76
               

               Conread position:
               89-253
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               89-274
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               99-296
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               150, 175
               

               Conread position:
               107-292
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               110-293
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               171, 139
               

               Conread position:
               117-293
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 72
               

               Conread position:
               134-374
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               148, 41
               

               Conread position:
               137-268
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               166-293
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               179-337
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 71
               
Show alignments to all cow chromosomes.