Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 2-246
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 94, 33

Conread position: 2-247
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 36

Conread position: 2-286
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 68

Conread position: 2-287
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 247, 21

Conread position: 2-306
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 153

Conread position: 5-243
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 60

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 5-247
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 91, 123

Conread position: 5-247
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 27

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 5-252
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 9

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 10

Conread position: 5-262
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 167

Conread position: 5-263
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 22

Conread position: 5-275
Cow position:
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 91

Conread position: 5-275
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 37

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 160

Conread position: 5-276
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 82, 39

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 73

Conread position: 5-283
Cow position:
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 94

Conread position: 5-285
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 151

Conread position: 5-285
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 113, 76

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 106, 90

Conread position: 5-286
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 246, 92

Conread position: 5-286
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 113, 93

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 63

Conread position: 5-288
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 148

Conread position: 5-288
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 90

Conread position: 5-289
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 244, 22

Conread position: 5-289
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 186

Conread position: 5-289
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 244, 37

Conread position: 5-289
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 241

Conread position: 5-289
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 243, 57

Conread position: 5-291
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 143

Conread position: 5-292
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 163

Conread position: 5-292
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 5-293
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 25

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 163, 16

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 160

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 14

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 200

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 47

Conread position: 5-296
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 167

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 140

Conread position: 5-310
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 5-311
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 49

Conread position: 5-338
Cow position:
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 79

Conread position: 6-247
Cow position:
Alignm length: 255
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 101

Conread position: 6-290
Cow position:
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 103

Conread position: 6-293
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 6-296
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 47

Conread position: 7-241
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 7-289
Cow position:
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 242

Conread position: 7-304
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 271, 11

Conread position: 9-276
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 120

Conread position: 9-276
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 53

Conread position: 9-287
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 164

Conread position: 9-292
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 100, 86

Conread position: 11-268
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 82, 61

Conread position: 12-274
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 13-275
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 134

Conread position: 19-247
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 66, 0

Conread position: 21-276
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 150

Conread position: 24-247
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 86

Conread position: 27-307
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 15

Conread position: 29-253
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 50

Conread position: 31-293
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 33-247
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 32

Conread position: 39-276
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 9

Conread position: 42-293
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 54, 146

Conread position: 54-253
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 158, 43

Conread position: 54-337
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 195, 32

Conread position: 55-276
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 55

Conread position: 57-253
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 88

Conread position: 62-276
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 62-290
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 63-293
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 90

Conread position: 63-313
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 96

Conread position: 65-275
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 88

Conread position: 65-276
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 101

Conread position: 65-294
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 81

Conread position: 65-296
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 30, 51

Conread position: 66-291
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 67-241
Cow position:
Alignm length: 177
Alignm identity: 144
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 67-275
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 199

Conread position: 67-293
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 69-253
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 52

Conread position: 71-289
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 89

Conread position: 75-296
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 182

Conread position: 79-293
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 80-276
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 61

Conread position: 80-289
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 190

Conread position: 80-304
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 102

Conread position: 81-293
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 64

Conread position: 99-276
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 150, 26

Conread position: 99-293
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 63

Conread position: 100-343
Cow position:
Alignm length: 248
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 105-296
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 173, 185

Conread position: 108-293
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 141, 148

Conread position: 111-312
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 51

Conread position: 116-275
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 136

Conread position: 122-292
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 136

Conread position: 125-246
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 65

Conread position: 127-260
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 37

Conread position: 128-305
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 26, 122

Conread position: 130-287
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 25

Show alignments to all cow chromosomes.