Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 1-246 |
| Cow position: | chr3:37486133-37485879 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 3-253 |
| Cow position: | chr3:18393726-18393481 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 5-229 |
| Cow position: | chr3:68878050-68877825 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 100, 122 |
| Conread position: | 5-241 |
| Cow position: | chr3:16656806-16656583 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 5-241 |
| Cow position: | chr3:80818396-80818622 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 5-242 |
| Cow position: | chr3:1133432-1133196 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 5-245 |
| Cow position: | chr3:1830905-1830671 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 5-245 |
| Cow position: | chr3:39065993-39066236 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-247 |
| Cow position: | chr3:48362743-48362984 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 116 |
| Conread position: | 5-247 |
| Cow position: | chr3:77496478-77496721 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 32 |
| Conread position: | 5-253 |
| Cow position: | chr3:8148002-8147761 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 209, 35 |
| Conread position: | 5-253 |
| Cow position: | chr3:18066794-18067042 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 162 |
| Conread position: | 5-253 |
| Cow position: | chr3:53384623-53384377 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 5-253 |
| Cow position: | chr3:61678351-61678601 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 166 |
| Conread position: | 5-253 |
| Cow position: | chr3:77226982-77227229 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 5-263 |
| Cow position: | chr3:8557121-8556868 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 91, 139 |
| Conread position: | 5-263 |
| Cow position: | chr3:67544214-67543953 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 5-270 |
| Cow position: | chr3:26894331-26894585 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 37 |
| Conread position: | 5-273 |
| Cow position: | chr3:2035958-2036224 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 5-274 |
| Cow position: | chr3:23735442-23735173 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 5-276 |
| Cow position: | chr3:2483116-2483376 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 5-276 |
| Cow position: | chr3:5101100-5100837 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 158 |
| Conread position: | 5-276 |
| Cow position: | chr3:9663527-9663242 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-276 |
| Cow position: | chr3:28908543-28908274 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 5-276 |
| Cow position: | chr3:35283425-35283161 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 43 |
| Conread position: | 5-276 |
| Cow position: | chr3:53149986-53150258 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 5-276 |
| Cow position: | chr3:62826953-62826689 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 5-276 |
| Cow position: | chr3:66610178-66609913 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 5-279 |
| Cow position: | chr3:59473776-59474052 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 5-284 |
| Cow position: | chr3:80564621-80564902 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 5-287 |
| Cow position: | chr3:19884282-19884567 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 5-287 |
| Cow position: | chr3:58383622-58383909 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 5-288 |
| Cow position: | chr3:68146164-68145901 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 5-289 |
| Cow position: | chr3:5851267-5850987 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 145 |
| Conread position: | 5-289 |
| Cow position: | chr3:80581336-80581609 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 5-292 |
| Cow position: | chr3:33698385-33698676 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 5-293 |
| Cow position: | chr3:10347007-10347302 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 5-293 |
| Cow position: | chr3:48241281-48241565 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 5-296 |
| Cow position: | chr3:59630840-59630550 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 5-305 |
| Cow position: | chr3:31903448-31903151 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 245, 131 |
| Conread position: | 5-321 |
| Cow position: | chr3:16004324-16004015 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 5-325 |
| Cow position: | chr3:83442219-83441896 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 5-337 |
| Cow position: | chr3:53429228-53428910 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 5-340 |
| Cow position: | chr3:70895707-70896054 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 5-374 |
| Cow position: | chr3:70566078-70565694 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 151 |
| Conread position: | 6-247 |
| Cow position: | chr3:80082156-80081923 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 81, 157 |
| Conread position: | 6-262 |
| Cow position: | chr3:31047281-31047035 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 243, 95 |
| Conread position: | 6-276 |
| Cow position: | chr3:49327607-49327871 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 56 |
| Conread position: | 6-276 |
| Cow position: | chr3:73708720-73708977 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 210, 36 |
| Conread position: | 6-286 |
| Cow position: | chr3:14552540-14552817 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 6-290 |
| Cow position: | chr3:55272379-55272101 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 7-296 |
| Cow position: | chr3:21341301-21341013 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 7-306 |
| Cow position: | chr3:53221690-53221974 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 242, 26 |
| Conread position: | 9-274 |
| Cow position: | chr3:30358970-30358707 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 87, 157 |
| Conread position: | 9-285 |
| Cow position: | chr3:61361081-61361345 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 203, 32 |
| Conread position: | 9-286 |
| Cow position: | chr3:15052278-15052010 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 9-291 |
| Cow position: | chr3:48296375-48296657 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 240, 158 |
| Conread position: | 9-292 |
| Cow position: | chr3:79220513-79220800 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 9-296 |
| Cow position: | chr3:29807127-29807418 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 11-256 |
| Cow position: | chr3:9843244-9843497 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 11-284 |
| Cow position: | chr3:75479683-75479939 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 11-371 |
| Cow position: | chr3:78076858-78077226 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 31 |
| Conread position: | 13-271 |
| Cow position: | chr3:31206540-31206800 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 163 |
| Conread position: | 15-305 |
| Cow position: | chr3:58969223-58968942 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 16-296 |
| Cow position: | chr3:55970178-55970457 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 197, 81 |
| Conread position: | 22-252 |
| Cow position: | chr3:2024861-2025092 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 156 |
| Conread position: | 27-293 |
| Cow position: | chr3:78200949-78201216 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 224 |
| Conread position: | 28-247 |
| Cow position: | chr3:20256876-20257105 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 28-296 |
| Cow position: | chr3:53112851-53113124 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 31-276 |
| Cow position: | chr3:53790858-53790607 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 37-292 |
| Cow position: | chr3:65968847-65969109 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 59, 231 |
| Conread position: | 37-381 |
| Cow position: | chr3:32584850-32585201 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 38-296 |
| Cow position: | chr3:82460876-82461132 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 43-241 |
| Cow position: | chr3:58158766-58158569 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 43-293 |
| Cow position: | chr3:2216058-2216314 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 210 |
| Conread position: | 45-285 |
| Cow position: | chr3:45647835-45648072 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 48-293 |
| Cow position: | chr3:53739488-53739238 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 54-253 |
| Cow position: | chr3:18854802-18855002 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 54-253 |
| Cow position: | chr3:51609525-51609728 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 54-268 |
| Cow position: | chr3:73759810-73759594 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 66 |
| Conread position: | 54-287 |
| Cow position: | chr3:65413566-65413337 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 54-292 |
| Cow position: | chr3:9641273-9641510 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 54-292 |
| Cow position: | chr3:44623188-44622938 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 54-293 |
| Cow position: | chr3:3985039-3985275 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 54-297 |
| Cow position: | chr3:56059516-56059758 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 54-326 |
| Cow position: | chr3:19006376-19006646 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 55-248 |
| Cow position: | chr3:13330062-13329877 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 108 |
| Conread position: | 55-252 |
| Cow position: | chr3:17895564-17895752 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 55-276 |
| Cow position: | chr3:45647387-45647607 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 55-293 |
| Cow position: | chr3:5096913-5097155 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 55-305 |
| Cow position: | chr3:68708293-68708047 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 55-334 |
| Cow position: | chr3:15158751-15159035 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 57-289 |
| Cow position: | chr3:39970160-39969921 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 59-289 |
| Cow position: | chr3:42588064-42588301 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 63-276 |
| Cow position: | chr3:5374052-5374262 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 63-276 |
| Cow position: | chr3:64281218-64281002 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 63-289 |
| Cow position: | chr3:4031686-4031915 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 63-289 |
| Cow position: | chr3:74409213-74409427 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 185, 37 |
| Conread position: | 64-285 |
| Cow position: | chr3:26065720-26065942 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 65-247 |
| Cow position: | chr3:34392376-34392197 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 65-248 |
| Cow position: | chr3:18607088-18607273 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 166 |
| Conread position: | 65-274 |
| Cow position: | chr3:56704817-56704616 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 65-276 |
| Cow position: | chr3:49140327-49140112 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 30 |
| Conread position: | 65-276 |
| Cow position: | chr3:59208534-59208744 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 65-287 |
| Cow position: | chr3:38863833-38864057 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 65-291 |
| Cow position: | chr3:81277984-81277753 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 65-293 |
| Cow position: | chr3:73443367-73443140 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 65-296 |
| Cow position: | chr3:53046937-53046712 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 65-304 |
| Cow position: | chr3:39171764-39171524 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 65-304 |
| Cow position: | chr3:75158085-75158318 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 66-296 |
| Cow position: | chr3:49731916-49731689 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 67-241 |
| Cow position: | chr3:68627953-68627787 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 71-287 |
| Cow position: | chr3:54945851-54946070 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 72-289 |
| Cow position: | chr3:525081-525289 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 73-296 |
| Cow position: | chr3:44932244-44932463 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 79-252 |
| Cow position: | chr3:56523767-56523598 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 80-242 |
| Cow position: | chr3:22716546-22716385 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 80-253 |
| Cow position: | chr3:33253147-33252970 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 85 |
| Conread position: | 83-276 |
| Cow position: | chr3:8604275-8604084 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 83-337 |
| Cow position: | chr3:75080504-75080770 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 161 |
| Conread position: | 85-293 |
| Cow position: | chr3:13507206-13507412 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 85-371 |
| Cow position: | chr3:3556286-3556586 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 85-374 |
| Cow position: | chr3:7331375-7331083 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 176 |
| Conread position: | 86-276 |
| Cow position: | chr3:22820313-22820498 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 11 |
| Conread position: | 86-288 |
| Cow position: | chr3:52607927-52608122 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 195, 11 |
| Conread position: | 87-276 |
| Cow position: | chr3:71237899-71238086 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 87-293 |
| Cow position: | chr3:61143835-61144049 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 188 |
| Conread position: | 94-289 |
| Cow position: | chr3:43233254-43233452 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 96-276 |
| Cow position: | chr3:55836076-55835894 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 99-256 |
| Cow position: | chr3:35074437-35074593 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 99-303 |
| Cow position: | chr3:25754792-25754983 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 179, 67 |
| Conread position: | 99-373 |
| Cow position: | chr3:26970581-26970856 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 150, 55 |
| Conread position: | 100-276 |
| Cow position: | chr3:11711710-11711891 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 101-253 |
| Cow position: | chr3:12563236-12563385 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 101-282 |
| Cow position: | chr3:12705801-12705609 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 103-272 |
| Cow position: | chr3:30384536-30384370 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 103-293 |
| Cow position: | chr3:83201768-83201578 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 147, 156 |
| Conread position: | 104-271 |
| Cow position: | chr3:8060893-8061052 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 44 |
| Conread position: | 105-276 |
| Cow position: | chr3:34937602-34937773 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 67 |
| Conread position: | 108-247 |
| Cow position: | chr3:29334749-29334611 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 62 |
| Conread position: | 108-276 |
| Cow position: | chr3:17447843-17447682 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 141, 56 |
| Conread position: | 116-306 |
| Cow position: | chr3:15506220-15506405 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 162, 133 |
| Conread position: | 118-262 |
| Cow position: | chr3:56301573-56301428 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 120-323 |
| Cow position: | chr3:60265459-60265258 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 44 |
| Conread position: | 122-374 |
| Cow position: | chr3:11063157-11063411 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 127 |
| Conread position: | 126-274 |
| Cow position: | chr3:23105583-23105438 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 127-282 |
| Cow position: | chr3:25944861-25945020 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 128-252 |
| Cow position: | chr3:5082857-5082732 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 128-285 |
| Cow position: | chr3:70609407-70609563 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 137-292 |
| Cow position: | chr3:27697189-27697031 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 152-274 |
| Cow position: | chr3:74079834-74079711 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 165-292 |
| Cow position: | chr3:34294466-34294338 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 171-280 |
| Cow position: | chr3:36418642-36418533 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 64 |
Show alignments to all cow chromosomes.