Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 5-241 |
| Cow position: | chr5:39447827-39447587 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 162 |
| Conread position: | 5-242 |
| Cow position: | chr5:3281159-3280927 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 5-245 |
| Cow position: | chr5:15363602-15363841 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 5-245 |
| Cow position: | chr5:44994336-44994091 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 164 |
| Conread position: | 5-247 |
| Cow position: | chr5:12672313-12672081 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 5-247 |
| Cow position: | chr5:19813511-19813266 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 5-247 |
| Cow position: | chr5:58519690-58519450 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 5-253 |
| Cow position: | chr5:41531381-41531126 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 5-253 |
| Cow position: | chr5:47317259-47317015 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 157 |
| Conread position: | 5-256 |
| Cow position: | chr5:29827762-29828008 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 91, 144 |
| Conread position: | 5-256 |
| Cow position: | chr5:67932755-67932505 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 5-265 |
| Cow position: | chr5:35145059-35145317 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 5-268 |
| Cow position: | chr5:45845984-45845723 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 5-273 |
| Cow position: | chr5:54869126-54869395 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-275 |
| Cow position: | chr5:72149960-72150225 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 49 |
| Conread position: | 5-276 |
| Cow position: | chr5:6086853-6086579 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-276 |
| Cow position: | chr5:9894415-9894147 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 5-276 |
| Cow position: | chr5:60519884-60520141 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 5-276 |
| Cow position: | chr5:74643952-74643692 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 137 |
| Conread position: | 5-279 |
| Cow position: | chr5:55176601-55176872 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 5-282 |
| Cow position: | chr5:3204547-3204822 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 5-283 |
| Cow position: | chr5:27403531-27403250 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 5-283 |
| Cow position: | chr5:68604562-68604846 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 164 |
| Conread position: | 5-284 |
| Cow position: | chr5:26467331-26467611 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 5-284 |
| Cow position: | chr5:54714033-54713744 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 218 |
| Conread position: | 5-285 |
| Cow position: | chr5:2395306-2395589 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-285 |
| Cow position: | chr5:6059898-6059617 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 5-285 |
| Cow position: | chr5:20270489-20270773 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 5-285 |
| Cow position: | chr5:29255480-29255196 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-285 |
| Cow position: | chr5:59135153-59135436 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 5-285 |
| Cow position: | chr5:63647758-63647486 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 90 |
| Conread position: | 5-286 |
| Cow position: | chr5:5938033-5938314 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 161 |
| Conread position: | 5-287 |
| Cow position: | chr5:21828565-21828857 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 5-287 |
| Cow position: | chr5:31285591-31285877 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 5-287 |
| Cow position: | chr5:34288758-34288480 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 5-287 |
| Cow position: | chr5:50821497-50821773 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 132 |
| Conread position: | 5-287 |
| Cow position: | chr5:57935404-57935118 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 5-288 |
| Cow position: | chr5:37942084-37941802 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 160 |
| Conread position: | 5-289 |
| Cow position: | chr5:28927888-28927595 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-289 |
| Cow position: | chr5:37645774-37646066 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 189 |
| Conread position: | 5-289 |
| Cow position: | chr5:45999312-45999027 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 203, 109 |
| Conread position: | 5-292 |
| Cow position: | chr5:6044995-6045287 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 5-292 |
| Cow position: | chr5:33414696-33414413 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 181, 92 |
| Conread position: | 5-292 |
| Cow position: | chr5:59443542-59443259 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 245 |
| Conread position: | 5-293 |
| Cow position: | chr5:14550877-14550585 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-293 |
| Cow position: | chr5:15598524-15598237 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 5-293 |
| Cow position: | chr5:21944090-21944395 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-293 |
| Cow position: | chr5:27015401-27015680 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 60 |
| Conread position: | 5-293 |
| Cow position: | chr5:47889006-47888714 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 265 |
| Conread position: | 5-293 |
| Cow position: | chr5:55756732-55756427 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 5-293 |
| Cow position: | chr5:62107786-62107493 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-296 |
| Cow position: | chr5:30816424-30816721 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 196 |
| Conread position: | 5-296 |
| Cow position: | chr5:47313182-47313476 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 140 |
| Conread position: | 5-296 |
| Cow position: | chr5:65776683-65776383 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 5-297 |
| Cow position: | chr5:3242756-3242476 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 244, 57 |
| Conread position: | 5-297 |
| Cow position: | chr5:44583406-44583129 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 5-304 |
| Cow position: | chr5:5111368-5111068 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 195 |
| Conread position: | 5-310 |
| Cow position: | chr5:30276404-30276712 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 90 |
| Conread position: | 5-312 |
| Cow position: | chr5:47601520-47601836 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 5-337 |
| Cow position: | chr5:23140869-23140532 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 164 |
| Conread position: | 5-370 |
| Cow position: | chr5:50599775-50600138 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 86 |
| Conread position: | 5-371 |
| Cow position: | chr5:65933220-65932852 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 6-272 |
| Cow position: | chr5:35826303-35826578 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 6-276 |
| Cow position: | chr5:16184802-16185066 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 6-293 |
| Cow position: | chr5:14314233-14314522 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 6 |
| Conread position: | 6-296 |
| Cow position: | chr5:4797603-4797317 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 161 |
| Conread position: | 6-296 |
| Cow position: | chr5:65941542-65941254 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 7-247 |
| Cow position: | chr5:56442992-56443235 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 7-253 |
| Cow position: | chr5:14415480-14415735 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 7-287 |
| Cow position: | chr5:55942687-55942406 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 7-288 |
| Cow position: | chr5:42667681-42667398 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 7-305 |
| Cow position: | chr5:51357791-51357490 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 8-268 |
| Cow position: | chr5:34915854-34916110 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 159 |
| Conread position: | 9-245 |
| Cow position: | chr5:54875964-54875732 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 9-256 |
| Cow position: | chr5:63917694-63917451 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 9-265 |
| Cow position: | chr5:43474567-43474815 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 9-266 |
| Cow position: | chr5:69099239-69099501 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 9-275 |
| Cow position: | chr5:73222414-73222664 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 9-276 |
| Cow position: | chr5:16508809-16509075 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 117 |
| Conread position: | 9-293 |
| Cow position: | chr5:50483149-50482866 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 164 |
| Conread position: | 10-241 |
| Cow position: | chr5:25231297-25231061 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 81, 32 |
| Conread position: | 10-268 |
| Cow position: | chr5:50950267-50950525 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 140 |
| Conread position: | 10-288 |
| Cow position: | chr5:50533667-50533394 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 10-296 |
| Cow position: | chr5:24348830-24349109 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 11-287 |
| Cow position: | chr5:21617170-21617447 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 11-293 |
| Cow position: | chr5:65887299-65887010 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 12-265 |
| Cow position: | chr5:2332808-2332542 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 44, 200 |
| Conread position: | 16-276 |
| Cow position: | chr5:26990112-26990371 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 17-287 |
| Cow position: | chr5:57327509-57327787 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 17-374 |
| Cow position: | chr5:12352061-12351713 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 115 |
| Conread position: | 23-337 |
| Cow position: | chr5:4507234-4506908 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 27-263 |
| Cow position: | chr5:38683087-38683322 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 128 |
| Conread position: | 27-286 |
| Cow position: | chr5:20783357-20783608 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 30-370 |
| Cow position: | chr5:64139297-64139650 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 281 |
| Conread position: | 37-247 |
| Cow position: | chr5:37366631-37366850 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 38-274 |
| Cow position: | chr5:63236112-63235875 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 42-291 |
| Cow position: | chr5:32140959-32140715 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 45-293 |
| Cow position: | chr5:65601209-65601454 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 51-276 |
| Cow position: | chr5:32956335-32956117 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 198, 76 |
| Conread position: | 53-247 |
| Cow position: | chr5:48178921-48178727 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 54-274 |
| Cow position: | chr5:51999977-52000199 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 54-292 |
| Cow position: | chr5:58144848-58144605 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 54-296 |
| Cow position: | chr5:55967125-55966880 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 55-243 |
| Cow position: | chr5:24837181-24837001 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 55-253 |
| Cow position: | chr5:24642963-24642770 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 55-275 |
| Cow position: | chr5:59873647-59873427 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 55-276 |
| Cow position: | chr5:42744556-42744763 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 56-293 |
| Cow position: | chr5:32975791-32975553 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 36, 134 |
| Conread position: | 56-371 |
| Cow position: | chr5:25035467-25035167 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 59-289 |
| Cow position: | chr5:22243022-22242784 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 60-247 |
| Cow position: | chr5:72007089-72006905 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 120 |
| Conread position: | 61-296 |
| Cow position: | chr5:24996459-24996221 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 188, 85 |
| Conread position: | 62-296 |
| Cow position: | chr5:30253511-30253742 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 62-301 |
| Cow position: | chr5:32963863-32963624 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 62-303 |
| Cow position: | chr5:45036786-45037029 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 63-247 |
| Cow position: | chr5:30639083-30638909 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 63-253 |
| Cow position: | chr5:30844879-30845069 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 63-275 |
| Cow position: | chr5:46122583-46122372 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 63-276 |
| Cow position: | chr5:53835482-53835692 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 63-295 |
| Cow position: | chr5:56433568-56433803 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 65-262 |
| Cow position: | chr5:16938239-16938041 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 65-279 |
| Cow position: | chr5:12709655-12709870 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 65-286 |
| Cow position: | chr5:41164857-41165076 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 65-293 |
| Cow position: | chr5:28324114-28324352 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 65-296 |
| Cow position: | chr5:20127823-20128054 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 67-246 |
| Cow position: | chr5:66297009-66297186 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 67-276 |
| Cow position: | chr5:32339204-32338987 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 191 |
| Conread position: | 67-276 |
| Cow position: | chr5:56070624-56070835 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 67-292 |
| Cow position: | chr5:32697042-32696826 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 68-241 |
| Cow position: | chr5:71454824-71454652 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 69-276 |
| Cow position: | chr5:15426301-15426508 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 180, 26 |
| Conread position: | 69-276 |
| Cow position: | chr5:56820487-56820283 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 70-268 |
| Cow position: | chr5:18090501-18090695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 71-256 |
| Cow position: | chr5:5257522-5257334 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 73-245 |
| Cow position: | chr5:5848410-5848243 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 74-381 |
| Cow position: | chr5:56028752-56028440 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 80-271 |
| Cow position: | chr5:64176337-64176143 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 81-293 |
| Cow position: | chr5:8024407-8024198 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 82-290 |
| Cow position: | chr5:35235923-35235714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 84-274 |
| Cow position: | chr5:57706703-57706897 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 85-252 |
| Cow position: | chr5:6572540-6572711 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 86-276 |
| Cow position: | chr5:57271473-57271286 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 86-289 |
| Cow position: | chr5:40039979-40039777 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 87-256 |
| Cow position: | chr5:29212739-29212903 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 97-381 |
| Cow position: | chr5:50943351-50943056 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 98-288 |
| Cow position: | chr5:34561812-34562005 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 98-289 |
| Cow position: | chr5:7044906-7044713 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 151, 10 |
| Conread position: | 99-286 |
| Cow position: | chr5:56518405-56518220 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 99-288 |
| Cow position: | chr5:57575570-57575761 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 99-293 |
| Cow position: | chr5:51053843-51053652 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 182, 59 |
| Conread position: | 103-274 |
| Cow position: | chr5:44587485-44587309 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 104-293 |
| Cow position: | chr5:52667839-52668028 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 105-374 |
| Cow position: | chr5:48010036-48009765 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 110-276 |
| Cow position: | chr5:46512951-46512784 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 112-266 |
| Cow position: | chr5:57576031-57576185 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 137, 31 |
| Conread position: | 114-289 |
| Cow position: | chr5:14629996-14629820 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 119-253 |
| Cow position: | chr5:62638730-62638863 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 125-273 |
| Cow position: | chr5:31223086-31222938 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 128-276 |
| Cow position: | chr5:30629324-30629180 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 129-292 |
| Cow position: | chr5:65967897-65967737 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 147, 120 |
| Conread position: | 137-247 |
| Cow position: | chr5:44673526-44673637 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 150-268 |
| Cow position: | chr5:63865647-63865766 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.