Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 2-285
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 116, 93

Conread position: 2-292
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 59, 175

Conread position: 2-292
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 5-241
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 153

Conread position: 5-247
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 48, 64

Conread position: 5-248
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-251
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 28

Conread position: 5-252
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 56

Conread position: 5-252
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 139

Conread position: 5-253
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 5-253
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 158

Conread position: 5-253
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 150

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 151

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 91, 154

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 131

Conread position: 5-253
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 91, 37

Conread position: 5-253
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 91, 37

Conread position: 5-268
Cow position:
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 159

Conread position: 5-270
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 32

Conread position: 5-271
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 184

Conread position: 5-271
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 72

Conread position: 5-272
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 112

Conread position: 5-274
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 96

Conread position: 5-274
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 157

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 162

Conread position: 5-276
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 244, 13

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 107

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 159

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 145

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 62

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 91

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 32

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 106, 90

Conread position: 5-286
Cow position:
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 142

Conread position: 5-287
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 70

Conread position: 5-288
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 51

Conread position: 5-289
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 70

Conread position: 5-292
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 273, 37

Conread position: 5-293
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 157

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 158

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 160

Conread position: 5-296
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 46

Conread position: 5-296
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 168

Conread position: 5-302
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 91, 40

Conread position: 5-305
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 169

Conread position: 5-374
Cow position:
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 26

Conread position: 6-253
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 28

Conread position: 6-253
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 165

Conread position: 6-284
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 150

Conread position: 6-371
Cow position:
Alignm length: 373
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 364

Conread position: 9-253
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 9-277
Cow position:
Alignm length: 272
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 9-277
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 239, 68

Conread position: 9-329
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 143

Conread position: 10-258
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 86, 155

Conread position: 10-293
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 239, 142

Conread position: 13-293
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 271

Conread position: 15-297
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 85

Conread position: 21-293
Cow position:
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 119

Conread position: 32-293
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 23, 140

Conread position: 34-369
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 267

Conread position: 35-381
Cow position:
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 17

Conread position: 37-293
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 114

Conread position: 42-247
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 74

Conread position: 42-284
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 89, 51

Conread position: 42-374
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 125

Conread position: 48-276
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 111

Conread position: 53-289
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 197

Conread position: 53-374
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 14, 104

Conread position: 54-253
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 104

Conread position: 54-278
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 115

Conread position: 54-291
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 109

Conread position: 54-292
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 54

Conread position: 54-292
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 55-245
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 152, 10

Conread position: 55-253
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 109

Conread position: 55-276
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 109

Conread position: 55-287
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 21, 208

Conread position: 59-291
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 190, 112

Conread position: 62-243
Cow position:
Alignm length: 185
Alignm identity: 150
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 33, 110

Conread position: 62-289
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 89

Conread position: 62-292
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 87

Conread position: 63-276
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 207

Conread position: 63-381
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 104

Conread position: 65-243
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 81

Conread position: 65-276
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 184, 32

Conread position: 65-276
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 99

Conread position: 65-276
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 184, 21

Conread position: 65-289
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 65-296
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 85

Conread position: 65-374
Cow position:
Alignm length: 312
Alignm identity: 217
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 192

Conread position: 66-293
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 30, 44

Conread position: 67-253
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 145

Conread position: 68-296
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 0

Conread position: 69-247
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 69-276
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 70-296
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 94

Conread position: 71-276
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 94

Conread position: 71-293
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 76-276
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 173, 16

Conread position: 77-247
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 77-270
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 30

Conread position: 78-296
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 80-248
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 85

Conread position: 80-260
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 70

Conread position: 80-296
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 78

Conread position: 81-337
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 91

Conread position: 81-374
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 89

Conread position: 83-256
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 24

Conread position: 83-297
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 53

Conread position: 84-247
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 11

Conread position: 86-286
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 78

Conread position: 86-287
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 163, 66

Conread position: 86-289
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 113

Conread position: 99-239
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 99-268
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 150, 63

Conread position: 99-286
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 99-293
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 150, 85

Conread position: 100-276
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 149, 49

Conread position: 101-256
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 101-267
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 0

Conread position: 102-303
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 147, 80

Conread position: 103-274
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 107-247
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 108-293
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 66

Conread position: 111-292
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 138, 37

Conread position: 112-287
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 48

Conread position: 115-253
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 115-293
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 118-285
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 26

Conread position: 118-302
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 44

Conread position: 122-293
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 42

Conread position: 124-293
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 54

Conread position: 125-284
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 124, 0

Conread position: 131-287
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 31

Conread position: 132-296
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 117, 136

Show alignments to all cow chromosomes.