Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 5-241
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 21

Conread position: 5-241
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 5-245
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 87, 168

Conread position: 5-247
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 208, 88

Conread position: 5-252
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 91, 56

Conread position: 5-252
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 78

Conread position: 5-253
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 13

Conread position: 5-253
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 203, 113

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 88, 24

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 92

Conread position: 5-254
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 14

Conread position: 5-256
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 37

Conread position: 5-256
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 14

Conread position: 5-266
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 5-268
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 90

Conread position: 5-270
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 92, 257

Conread position: 5-273
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 203, 0

Conread position: 5-274
Cow position:
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 5-276
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 217

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 157, 26

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 69

Conread position: 5-276
Cow position:
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 42

Conread position: 5-282
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 161

Conread position: 5-283
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 91, 18

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 113, 90

Conread position: 5-285
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 235

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 113, 72

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 113, 90

Conread position: 5-286
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 13

Conread position: 5-287
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 9

Conread position: 5-289
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 46

Conread position: 5-290
Cow position:
Alignm length: 287
Alignm identity: 212
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 273, 46

Conread position: 5-291
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 113, 90

Conread position: 5-291
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 180

Conread position: 5-292
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 202, 90

Conread position: 5-292
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-292
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 165

Conread position: 5-292
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 28

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 159

Conread position: 5-293
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 37

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 57

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 91, 114

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 151

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 49

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 37

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 30

Conread position: 5-293
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 90, 181

Conread position: 5-293
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 91, 23

Conread position: 5-293
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 54

Conread position: 5-293
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 91, 154

Conread position: 5-296
Cow position:
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 287

Conread position: 5-296
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 14

Conread position: 5-371
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-371
Cow position:
Alignm length: 378
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 91, 37

Conread position: 5-374
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 154

Conread position: 5-374
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 204

Conread position: 6-285
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 27

Conread position: 6-286
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 146

Conread position: 6-296
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 170

Conread position: 7-253
Cow position:
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 7-374
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 56, 44

Conread position: 9-285
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 109, 86

Conread position: 9-286
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 243

Conread position: 10-276
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 38

Conread position: 10-287
Cow position:
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 143

Conread position: 15-253
Cow position:
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 17-276
Cow position:
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 18-276
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 231, 85

Conread position: 18-296
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 146

Conread position: 19-288
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 77, 126

Conread position: 20-276
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 60

Conread position: 27-279
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 76, 68

Conread position: 28-276
Cow position:
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 37

Conread position: 37-247
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 32

Conread position: 39-292
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 142

Conread position: 40-276
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 132

Conread position: 41-277
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 121

Conread position: 47-293
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 8

Conread position: 48-276
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 44, 18

Conread position: 49-256
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 51-289
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 53-253
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 65

Conread position: 54-247
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 114

Conread position: 54-253
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 68

Conread position: 54-275
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 75

Conread position: 54-289
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 12, 49

Conread position: 54-293
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 42

Conread position: 55-265
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 55-276
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 55-289
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 40, 71

Conread position: 55-296
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 194, 40

Conread position: 55-371
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 44

Conread position: 57-286
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 5

Conread position: 57-304
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 103

Conread position: 57-319
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 83

Conread position: 59-276
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 190, 38

Conread position: 62-241
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 22, 94

Conread position: 62-246
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 105

Conread position: 62-284
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 62-286
Cow position:
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 102

Conread position: 63-261
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 94

Conread position: 65-247
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 92

Conread position: 65-274
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 65-276
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 191

Conread position: 65-293
Cow position:
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 196

Conread position: 66-289
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 85

Conread position: 66-292
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 67-273
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 29, 101

Conread position: 67-276
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 67-276
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 82

Conread position: 67-288
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 183

Conread position: 67-296
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 52

Conread position: 69-310
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 79

Conread position: 70-276
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 69

Conread position: 70-376
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 94

Conread position: 71-276
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 95

Conread position: 77-275
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 77-294
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 19, 109

Conread position: 80-284
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 80

Conread position: 82-293
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 61

Conread position: 83-247
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 83

Conread position: 83-296
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 166, 109

Conread position: 86-291
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 78

Conread position: 86-296
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 19

Conread position: 89-296
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 22

Conread position: 97-276
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 67

Conread position: 98-276
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 151, 10

Conread position: 98-287
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 99-276
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 150, 10

Conread position: 103-289
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 54

Conread position: 104-377
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 146

Conread position: 109-276
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 10

Conread position: 111-279
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 5, 88

Conread position: 114-292
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 138

Conread position: 121-274
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 125-296
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 123, 18

Conread position: 143-291
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 54

Show alignments to all cow chromosomes.