Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 1-265
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 155

Conread position: 4-247
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 59

Conread position: 5-248
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 69, 36

Conread position: 5-252
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 150

Conread position: 5-253
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 43

Conread position: 5-256
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 59

Conread position: 5-270
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 41

Conread position: 5-271
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 263

Conread position: 5-274
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 98, 90

Conread position: 5-275
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 92

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 95, 12

Conread position: 5-276
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 161

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 124

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 161

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 5-276
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 158

Conread position: 5-276
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 114

Conread position: 5-278
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 157

Conread position: 5-279
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 93, 158

Conread position: 5-284
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 208, 54

Conread position: 5-284
Cow position:
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 244

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 113, 65

Conread position: 5-287
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 29

Conread position: 5-287
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 37

Conread position: 5-288
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 254

Conread position: 5-289
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 151

Conread position: 5-289
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 5-291
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 158

Conread position: 5-292
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 175

Conread position: 5-292
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 37

Conread position: 5-292
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 5-292
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 10

Conread position: 5-293
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 112, 90

Conread position: 5-296
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 5-296
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 91, 134

Conread position: 5-301
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 73

Conread position: 5-301
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 96, 9

Conread position: 5-303
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 91, 32

Conread position: 5-310
Cow position:
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 0

Conread position: 5-310
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 157

Conread position: 5-311
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 37

Conread position: 5-370
Cow position:
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 87

Conread position: 6-248
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 90, 124

Conread position: 6-274
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 87

Conread position: 6-276
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 6-276
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 129

Conread position: 6-276
Cow position:
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 162

Conread position: 6-293
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 51

Conread position: 7-242
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 7-266
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 54

Conread position: 7-287
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 7-333
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 74

Conread position: 9-253
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 162

Conread position: 9-276
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 152

Conread position: 9-276
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 149

Conread position: 9-287
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 33

Conread position: 9-291
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 87, 33

Conread position: 10-296
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 39

Conread position: 13-294
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 11

Conread position: 14-285
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 80, 24

Conread position: 14-289
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 216

Conread position: 15-279
Cow position:
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 97

Conread position: 15-293
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 18-276
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 78, 146

Conread position: 21-243
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 74

Conread position: 22-291
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 26

Conread position: 27-271
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 27-296
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 136

Conread position: 37-292
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 91

Conread position: 39-247
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 61, 133

Conread position: 45-276
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 35

Conread position: 48-289
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 48, 102

Conread position: 51-253
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 108

Conread position: 54-268
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 121

Conread position: 54-284
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 92

Conread position: 54-292
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 108

Conread position: 55-293
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 88

Conread position: 57-253
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 112

Conread position: 59-253
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 97

Conread position: 63-256
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 102

Conread position: 63-284
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 88

Conread position: 63-370
Cow position:
Alignm length: 312
Alignm identity: 214
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 77

Conread position: 64-301
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 18

Conread position: 65-241
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 57

Conread position: 65-276
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 9

Conread position: 65-376
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 90

Conread position: 66-242
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 137

Conread position: 66-253
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 106, 29

Conread position: 69-240
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 70-262
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 22

Conread position: 70-272
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 178, 27

Conread position: 70-370
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 26, 103

Conread position: 71-247
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 71-374
Cow position:
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 24

Conread position: 75-276
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 54

Conread position: 76-256
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 48

Conread position: 77-253
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 19

Conread position: 77-276
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 77-296
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 88

Conread position: 80-276
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 16, 75

Conread position: 80-296
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 95

Conread position: 81-241
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 18

Conread position: 82-292
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 86-289
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 163, 9

Conread position: 99-266
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 151, 0

Conread position: 99-268
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 150, 63

Conread position: 99-289
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 179, 153

Conread position: 99-374
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 71

Conread position: 100-243
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 107, 64

Conread position: 101-293
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 105-275
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 50

Conread position: 109-291
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 118-285
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 66

Conread position: 123-293
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 173

Conread position: 125-289
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 151, 43

Conread position: 129-287
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 120, 23

Conread position: 139-276
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 143-292
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 0

Show alignments to all cow chromosomes.