Cow genome map

Conread name: rpigcf0_004202.y1

Conread position: 1-282
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 5, 268

Conread position: 2-247
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 94, 40

Conread position: 5-241
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 5-246
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 134

Conread position: 5-247
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 96, 29

Conread position: 5-247
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 91, 42

Conread position: 5-247
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 159

Conread position: 5-248
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 89, 113

Conread position: 5-252
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 10

Conread position: 5-253
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 41

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 88, 26

Conread position: 5-253
Cow position:
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 145

Conread position: 5-253
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 183

Conread position: 5-256
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 157

Conread position: 5-270
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 41

Conread position: 5-274
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 38

Conread position: 5-276
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 98, 52

Conread position: 5-276
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 175

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 5-276
Cow position:
Alignm length: 276
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-278
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 151

Conread position: 5-278
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 240

Conread position: 5-286
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 39, 13

Conread position: 5-287
Cow position:
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 145

Conread position: 5-287
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 158

Conread position: 5-289
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 5-289
Cow position:
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-292
Cow position:
Alignm length: 294
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-292
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 146

Conread position: 5-292
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 90

Conread position: 5-293
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 106, 90

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 37

Conread position: 5-293
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 90

Conread position: 5-293
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 5-294
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 5-296
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 202, 94

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 93

Conread position: 5-296
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 37

Conread position: 5-303
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 72

Conread position: 5-304
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 99, 181

Conread position: 5-304
Cow position:
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 5-305
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 110

Conread position: 5-306
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 37

Conread position: 5-311
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 160

Conread position: 5-370
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 138

Conread position: 5-371
Cow position:
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 92

Conread position: 5-374
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 5-381
Cow position:
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 6-252
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 171

Conread position: 6-253
Cow position:
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 6-282
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 89, 48

Conread position: 6-283
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 158

Conread position: 6-289
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 144

Conread position: 6-293
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 89

Conread position: 6-296
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 166

Conread position: 6-371
Cow position:
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 7-293
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 282

Conread position: 9-276
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 56

Conread position: 9-276
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 9-289
Cow position:
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 39

Conread position: 9-293
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 9-296
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 158

Conread position: 10-241
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 86, 140

Conread position: 11-267
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 85

Conread position: 11-337
Cow position:
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 279

Conread position: 12-293
Cow position:
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 50

Conread position: 14-251
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 28

Conread position: 14-253
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 28

Conread position: 14-273
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 164

Conread position: 14-276
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 152

Conread position: 14-374
Cow position:
Alignm length: 377
Alignm identity: 257
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 78

Conread position: 15-268
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 81, 25

Conread position: 15-276
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 182

Conread position: 15-285
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 81, 249

Conread position: 17-276
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 25

Conread position: 17-285
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 101, 78

Conread position: 18-286
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 0

Conread position: 28-296
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 67

Conread position: 37-291
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 55, 149

Conread position: 37-371
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 127

Conread position: 42-253
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 111

Conread position: 43-292
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 53, 157

Conread position: 48-247
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 54-276
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 54-276
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 115

Conread position: 55-256
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 110

Conread position: 55-276
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 194, 31

Conread position: 55-287
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 55-292
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 57

Conread position: 55-293
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 240

Conread position: 56-253
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 193, 43

Conread position: 63-276
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 100

Conread position: 64-293
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 65-247
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 106

Conread position: 65-247
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 99

Conread position: 65-276
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 88

Conread position: 65-276
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 69

Conread position: 65-303
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 17

Conread position: 66-248
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 100

Conread position: 67-247
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 69-276
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 70-293
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 94

Conread position: 70-294
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 179, 0

Conread position: 77-276
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 88

Conread position: 77-286
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 110

Conread position: 80-284
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 86

Conread position: 80-284
Cow position:
Alignm length: 210
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 15

Conread position: 80-291
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 7, 100

Conread position: 84-252
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 82

Conread position: 84-276
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 12, 72

Conread position: 85-293
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 97-265
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 99-296
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 150, 57

Conread position: 99-374
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 150, 12

Conread position: 101-252
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 65

Conread position: 101-286
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 107, 53

Conread position: 102-257
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 147, 76

Conread position: 103-253
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 103-293
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 146

Conread position: 104-268
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 50

Conread position: 104-292
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 145, 62

Conread position: 105-289
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 108-291
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 71

Conread position: 112-289
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 54

Conread position: 114-292
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 143

Conread position: 115-276
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 21

Conread position: 118-374
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 47

Conread position: 122-248
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 122-276
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 61

Conread position: 141-304
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 142

Conread position: 153-374
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 96, 39

Conread position: 158-292
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.