Cow genome map
| Conread name: | rpigcf0_004202.y1 |
| Conread position: | 1-282 |
| Cow position: | chrX:44835111-44834824 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 5, 268 |
| Conread position: | 2-247 |
| Cow position: | chrX:27442845-27442605 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 94, 40 |
| Conread position: | 5-241 |
| Cow position: | chrX:26625975-26625726 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 5-246 |
| Cow position: | chrX:151611-151854 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 5-247 |
| Cow position: | chrX:1176264-1176029 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 5-247 |
| Cow position: | chrX:3654318-3654558 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 5-247 |
| Cow position: | chrX:17794705-17794933 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 5-247 |
| Cow position: | chrX:36250152-36249911 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 99, 159 |
| Conread position: | 5-248 |
| Cow position: | chrX:35268600-35268833 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 89, 113 |
| Conread position: | 5-252 |
| Cow position: | chrX:41879220-41878978 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 10 |
| Conread position: | 5-253 |
| Cow position: | chrX:5872026-5872278 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 5-253 |
| Cow position: | chrX:7806088-7806337 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 5-253 |
| Cow position: | chrX:19015152-19015395 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 5-253 |
| Cow position: | chrX:42462038-42461787 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 183 |
| Conread position: | 5-256 |
| Cow position: | chrX:4123545-4123798 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 157 |
| Conread position: | 5-270 |
| Cow position: | chrX:21592996-21593261 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 5-274 |
| Cow position: | chrX:4869253-4869526 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 5-276 |
| Cow position: | chrX:5118773-5118523 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 5-276 |
| Cow position: | chrX:12115751-12116026 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 5-276 |
| Cow position: | chrX:20582740-20583000 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 168 |
| Conread position: | 5-276 |
| Cow position: | chrX:26441070-26440798 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 175 |
| Conread position: | 5-276 |
| Cow position: | chrX:34401708-34401978 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 5-276 |
| Cow position: | chrX:38439183-38439458 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-278 |
| Cow position: | chrX:6543966-6544237 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 151 |
| Conread position: | 5-278 |
| Cow position: | chrX:35273054-35273337 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 240 |
| Conread position: | 5-286 |
| Cow position: | chrX:14599243-14599524 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 5-287 |
| Cow position: | chrX:40557966-40557689 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 5-287 |
| Cow position: | chrX:41743623-41743906 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 158 |
| Conread position: | 5-289 |
| Cow position: | chrX:1616341-1616050 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-289 |
| Cow position: | chrX:40269186-40269483 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-292 |
| Cow position: | chrX:14884254-14883961 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-292 |
| Cow position: | chrX:20340181-20339893 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 146 |
| Conread position: | 5-292 |
| Cow position: | chrX:27705303-27705584 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 201, 90 |
| Conread position: | 5-293 |
| Cow position: | chrX:5123651-5123358 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 5-293 |
| Cow position: | chrX:7718566-7718853 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 5-293 |
| Cow position: | chrX:20945278-20945565 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 102, 90 |
| Conread position: | 5-293 |
| Cow position: | chrX:40452503-40452212 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-294 |
| Cow position: | chrX:10831802-10831493 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 5-296 |
| Cow position: | chrX:161138-161413 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 202, 94 |
| Conread position: | 5-296 |
| Cow position: | chrX:31250101-31250389 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 5-296 |
| Cow position: | chrX:34502633-34502925 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 37 |
| Conread position: | 5-303 |
| Cow position: | chrX:34532241-34532530 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 5-304 |
| Cow position: | chrX:30159301-30159000 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 99, 181 |
| Conread position: | 5-304 |
| Cow position: | chrX:35609696-35609999 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 168 |
| Conread position: | 5-305 |
| Cow position: | chrX:14924710-14925013 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 110 |
| Conread position: | 5-306 |
| Cow position: | chrX:10306383-10306687 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 5-311 |
| Cow position: | chrX:34663149-34662832 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 160 |
| Conread position: | 5-370 |
| Cow position: | chrX:37072116-37072480 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 138 |
| Conread position: | 5-371 |
| Cow position: | chrX:15545607-15545974 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 92 |
| Conread position: | 5-374 |
| Cow position: | chrX:11655789-11656176 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-381 |
| Cow position: | chrX:24424682-24424299 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 6-252 |
| Cow position: | chrX:22482978-22482730 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 171 |
| Conread position: | 6-253 |
| Cow position: | chrX:12309677-12309428 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 6-282 |
| Cow position: | chrX:27516244-27516516 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 6-283 |
| Cow position: | chrX:37843431-37843708 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 158 |
| Conread position: | 6-289 |
| Cow position: | chrX:13648073-13647792 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 144 |
| Conread position: | 6-293 |
| Cow position: | chrX:45932715-45933008 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 89 |
| Conread position: | 6-296 |
| Cow position: | chrX:7571617-7571906 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 166 |
| Conread position: | 6-371 |
| Cow position: | chrX:37232123-37232499 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 7-293 |
| Cow position: | chrX:11806305-11806017 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 282 |
| Conread position: | 9-276 |
| Cow position: | chrX:5017692-5017434 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 9-276 |
| Cow position: | chrX:42171582-42171316 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 9-289 |
| Cow position: | chrX:8796964-8797248 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 9-293 |
| Cow position: | chrX:46723027-46722736 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 9-296 |
| Cow position: | chrX:18695207-18694924 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 158 |
| Conread position: | 10-241 |
| Cow position: | chrX:11082898-11082670 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 140 |
| Conread position: | 11-267 |
| Cow position: | chrX:31260915-31260656 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 11-337 |
| Cow position: | chrX:35388191-35387866 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 279 |
| Conread position: | 12-293 |
| Cow position: | chrX:2467597-2467881 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 14-251 |
| Cow position: | chrX:15139823-15139590 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 14-253 |
| Cow position: | chrX:37836308-37836546 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 14-273 |
| Cow position: | chrX:33855522-33855256 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 164 |
| Conread position: | 14-276 |
| Cow position: | chrX:23497946-23497688 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 152 |
| Conread position: | 14-374 |
| Cow position: | chrX:34376676-34377037 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 15-268 |
| Cow position: | chrX:9997611-9997363 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 15-276 |
| Cow position: | chrX:40647698-40647966 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 182 |
| Conread position: | 15-285 |
| Cow position: | chrX:8730799-8731076 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 81, 249 |
| Conread position: | 17-276 |
| Cow position: | chrX:8925428-8925681 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 17-285 |
| Cow position: | chrX:26709326-26709598 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 101, 78 |
| Conread position: | 18-286 |
| Cow position: | chrX:12017998-12018283 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 28-296 |
| Cow position: | chrX:17725711-17725973 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 67 |
| Conread position: | 37-291 |
| Cow position: | chrX:17541706-17541954 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 149 |
| Conread position: | 37-371 |
| Cow position: | chrX:32020380-32020042 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 42-253 |
| Cow position: | chrX:28878415-28878212 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 111 |
| Conread position: | 43-292 |
| Cow position: | chrX:678820-678575 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 48-247 |
| Cow position: | chrX:27432166-27431964 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 54-276 |
| Cow position: | chrX:30833079-30832869 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 54-276 |
| Cow position: | chrX:39558591-39558370 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 55-256 |
| Cow position: | chrX:2206784-2206590 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 41, 110 |
| Conread position: | 55-276 |
| Cow position: | chrX:21004444-21004661 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 55-287 |
| Cow position: | chrX:41884658-41884422 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 55-292 |
| Cow position: | chrX:23514258-23514019 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 55-293 |
| Cow position: | chrX:21672311-21672554 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 240 |
| Conread position: | 56-253 |
| Cow position: | chrX:11939163-11938970 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 193, 43 |
| Conread position: | 63-276 |
| Cow position: | chrX:41167196-41166984 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 64-293 |
| Cow position: | chrX:17662828-17662595 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 65-247 |
| Cow position: | chrX:41198874-41199057 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 106 |
| Conread position: | 65-247 |
| Cow position: | chrX:42339166-42338992 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 65-276 |
| Cow position: | chrX:2648580-2648373 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 65-276 |
| Cow position: | chrX:17888636-17888439 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 65-303 |
| Cow position: | chrX:37910223-37910450 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 66-248 |
| Cow position: | chrX:13265849-13265672 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 67-247 |
| Cow position: | chrX:30421167-30420979 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 69-276 |
| Cow position: | chrX:13382098-13382310 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 70-293 |
| Cow position: | chrX:20792043-20791817 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 70-294 |
| Cow position: | chrX:46315604-46315378 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 77-276 |
| Cow position: | chrX:1503121-1503316 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 77-286 |
| Cow position: | chrX:46073040-46072828 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 80-284 |
| Cow position: | chrX:29509659-29509452 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 80-284 |
| Cow position: | chrX:37781328-37781122 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 80-291 |
| Cow position: | chrX:29602048-29601834 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 84-252 |
| Cow position: | chrX:16324175-16324010 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 82 |
| Conread position: | 84-276 |
| Cow position: | chrX:29542430-29542239 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 85-293 |
| Cow position: | chrX:36961427-36961641 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 97-265 |
| Cow position: | chrX:36355926-36356082 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 99-296 |
| Cow position: | chrX:17908478-17908285 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 57 |
| Conread position: | 99-374 |
| Cow position: | chrX:10252376-10252105 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 101-252 |
| Cow position: | chrX:37540932-37541081 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 65 |
| Conread position: | 101-286 |
| Cow position: | chrX:8991695-8991877 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 102-257 |
| Cow position: | chrX:43730406-43730257 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 103-253 |
| Cow position: | chrX:23785463-23785619 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 103-293 |
| Cow position: | chrX:31311835-31312025 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 174, 146 |
| Conread position: | 104-268 |
| Cow position: | chrX:24149450-24149613 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 104-292 |
| Cow position: | chrX:36067830-36068010 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 105-289 |
| Cow position: | chrX:42235722-42235534 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 108-291 |
| Cow position: | chrX:31256682-31256862 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 112-289 |
| Cow position: | chrX:7336645-7336823 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 114-292 |
| Cow position: | chrX:48044379-48044203 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 115-276 |
| Cow position: | chrX:31252239-31252398 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 118-374 |
| Cow position: | chrX:27145447-27145699 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 122-248 |
| Cow position: | chrX:4398954-4399080 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-276 |
| Cow position: | chrX:34792482-34792328 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 61 |
| Conread position: | 141-304 |
| Cow position: | chrX:20584166-20584331 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 142 |
| Conread position: | 153-374 |
| Cow position: | chrX:34313889-34314119 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 158-292 |
| Cow position: | chrX:616401-616264 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.