Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 229-416
Cow position: chr10:35248878-35249070 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 235-384
Cow position: chr10:30923043-30923196 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 261-416
Cow position: chr10:15298286-15298437 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 261-416
Cow position: chr10:35820113-35820263 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 264-416
Cow position: chr10:48377169-48377324 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 275-417
Cow position: chr10:43909634-43909777 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 277-387
Cow position: chr10:26750564-26750455 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 277-416
Cow position: chr10:9959430-9959289 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 279-415
Cow position: chr10:38800049-38799913 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 54

Conread position: 285-407
Cow position: chr10:5889562-5889678 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 287-419
Cow position: chr10:66365503-66365371 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 17

Conread position: 288-387
Cow position: chr10:24312692-24312792 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 288-404
Cow position: chr10:17518643-17518762 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 289-406
Cow position: chr10:5108654-5108771 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-418
Cow position: chr10:25913582-25913712 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 289-418
Cow position: chr10:63757851-63757980 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 291-417
Cow position: chr10:18849716-18849597 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 293-387
Cow position: chr10:49686936-49686843 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 83
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 293-400
Cow position: chr10:59663743-59663850 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr10:35017932-35017818 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 293-405
Cow position: chr10:43487909-43487798 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 293-414
Cow position: chr10:63312540-63312660 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 293-416
Cow position: chr10:15868449-15868326 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr10:33122385-33122509 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 293-416
Cow position: chr10:35720307-35720183 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 293-416
Cow position: chr10:38195780-38195903 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr10:39124326-39124208 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 293-416
Cow position: chr10:46934584-46934707 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 294-402
Cow position: chr10:25150079-25149971 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr10:35717079-35717189 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 294-406
Cow position: chr10:8161699-8161587 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 22

Conread position: 294-406
Cow position: chr10:55382509-55382399 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 294-407
Cow position: chr10:2328384-2328272 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 294-416
Cow position: chr10:52824980-52825098 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 294-416
Cow position: chr10:54263418-54263296 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 294-420
Cow position: chr10:41408459-41408333 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 295-404
Cow position: chr10:15601986-15602095 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 295-404
Cow position: chr10:16598884-16598774 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 295-404
Cow position: chr10:16644995-16645103 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 295-405
Cow position: chr10:32336214-32336103 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 295-405
Cow position: chr10:38370260-38370370 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 295-409
Cow position: chr10:61509757-61509869 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 295-411
Cow position: chr10:42467555-42467439 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 295-416
Cow position: chr10:6174114-6174234 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 295-416
Cow position: chr10:36945606-36945728 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 295-416
Cow position: chr10:52152989-52152869 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 296-404
Cow position: chr10:9797721-9797825 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 296-405
Cow position: chr10:6719167-6719059 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 296-405
Cow position: chr10:14622574-14622465 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 296-416
Cow position: chr10:19403103-19402983 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 6

Conread position: 296-417
Cow position: chr10:10027764-10027644 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 296-417
Cow position: chr10:44730284-44730404 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 297-405
Cow position: chr10:31718191-31718299 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-408
Cow position: chr10:44758997-44758887 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 297-416
Cow position: chr10:1978482-1978597 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 297-416
Cow position: chr10:48316754-48316873 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-419
Cow position: chr10:31004828-31004947 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 299-405
Cow position: chr10:37014824-37014719 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 301-405
Cow position: chr10:28843546-28843442 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 301-417
Cow position: chr10:19503094-19503209 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 302-404
Cow position: chr10:50151362-50151465 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 304-397
Cow position: chr10:16524142-16524236 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 304-404
Cow position: chr10:30452014-30451913 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 304-406
Cow position: chr10:65071504-65071403 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 304-416
Cow position: chr10:13363693-13363805 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr10:34705461-34705351 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 304-417
Cow position: chr10:17984067-17983954 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-417
Cow position: chr10:28721960-28721848 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 305-405
Cow position: chr10:35715405-35715504 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 305-405
Cow position: chr10:45378819-45378919 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 305-418
Cow position: chr10:66940657-66940769 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 306-416
Cow position: chr10:52364978-52364867 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 307-406
Cow position: chr10:28223396-28223297 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 309-416
Cow position: chr10:35637964-35638071 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 311-405
Cow position: chr10:37065059-37065151 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 311-406
Cow position: chr10:14816985-14817080 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 311-411
Cow position: chr10:42574205-42574105 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 311-414
Cow position: chr10:3708313-3708209 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 311-416
Cow position: chr10:28571578-28571473 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 312-387
Cow position: chr10:40164204-40164279 (view UCSC Genome Browser custom track)
Alignm length: 76
Alignm identity: 70
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-405
Cow position: chr10:36855955-36856045 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-410
Cow position: chr10:17844937-17844841 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 315-414
Cow position: chr10:16830212-16830312 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 316-405
Cow position: chr10:24422001-24422090 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 316-417
Cow position: chr10:15383501-15383400 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.