Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 240-416
Cow position: chr11:21637343-21637521 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 78

Conread position: 254-416
Cow position: chr11:50472561-50472397 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 256-380
Cow position: chr11:74723775-74723656 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 258-405
Cow position: chr11:32800867-32800717 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 258-406
Cow position: chr11:25791453-25791604 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 19

Conread position: 275-416
Cow position: chr11:63849729-63849871 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 12

Conread position: 286-384
Cow position: chr11:48383739-48383641 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-387
Cow position: chr11:68870456-68870557 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-404
Cow position: chr11:34968404-34968522 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-416
Cow position: chr11:68592230-68592098 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 289-415
Cow position: chr11:55830023-55830147 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 289-415
Cow position: chr11:68570178-68570300 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 290-401
Cow position: chr11:36914360-36914471 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-416
Cow position: chr11:28092652-28092530 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 292-406
Cow position: chr11:72568263-72568377 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 292-409
Cow position: chr11:12080048-12079929 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 292-410
Cow position: chr11:28078692-28078574 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 292-416
Cow position: chr11:24551596-24551470 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 293-402
Cow position: chr11:81043330-81043439 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr11:16315076-16314964 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr11:25968651-25968763 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr11:55744672-55744559 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 293-405
Cow position: chr11:77013974-77013860 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 293-406
Cow position: chr11:53773883-53773772 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 293-407
Cow position: chr11:21590593-21590476 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 293-410
Cow position: chr11:30165713-30165600 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 293-414
Cow position: chr11:1932175-1932052 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 108

Conread position: 293-415
Cow position: chr11:9293999-9293874 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 293-415
Cow position: chr11:12555102-12555224 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 23

Conread position: 293-416
Cow position: chr11:8670219-8670096 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr11:20823676-20823799 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr11:35924264-35924142 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 293-416
Cow position: chr11:37099972-37100093 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 293-416
Cow position: chr11:62102244-62102367 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr11:63475472-63475592 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 293-416
Cow position: chr11:64781290-64781167 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr11:65939660-65939782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 293-416
Cow position: chr11:80370315-80370193 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 293-417
Cow position: chr11:13940389-13940266 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 293-417
Cow position: chr11:17889524-17889649 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 293-418
Cow position: chr11:26057445-26057570 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-440
Cow position: chr11:60142893-60143040 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 18

Conread position: 294-404
Cow position: chr11:55334120-55334010 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-413
Cow position: chr11:33271630-33271511 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 294-416
Cow position: chr11:13592940-13592816 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 294-416
Cow position: chr11:44176792-44176676 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 294-416
Cow position: chr11:62889691-62889813 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-395
Cow position: chr11:50197311-50197412 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 295-400
Cow position: chr11:7571821-7571715 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 295-410
Cow position: chr11:31525457-31525571 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 295-414
Cow position: chr11:36521080-36520960 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 295-416
Cow position: chr11:22102558-22102679 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-416
Cow position: chr11:44620153-44620035 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 295-416
Cow position: chr11:46884580-46884454 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 295-419
Cow position: chr11:64607045-64607170 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 296-405
Cow position: chr11:68909335-68909444 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 27

Conread position: 296-416
Cow position: chr11:35732883-35733003 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 95

Conread position: 296-419
Cow position: chr11:30111812-30111685 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 297-418
Cow position: chr11:23278956-23279077 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 18

Conread position: 297-421
Cow position: chr11:41295025-41295148 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 298-397
Cow position: chr11:62230386-62230286 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 300-405
Cow position: chr11:68909658-68909763 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 24

Conread position: 301-416
Cow position: chr11:33369345-33369231 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 303-404
Cow position: chr11:58186064-58185963 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 303-410
Cow position: chr11:60296930-60296821 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 304-390
Cow position: chr11:46335041-46334955 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 79
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 304-405
Cow position: chr11:1067248-1067348 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 304-405
Cow position: chr11:59744187-59744086 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 304-414
Cow position: chr11:66896494-66896604 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 304-415
Cow position: chr11:1980074-1980187 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 304-415
Cow position: chr11:51683407-51683296 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr11:25620199-25620310 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 304-417
Cow position: chr11:26823303-26823190 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-417
Cow position: chr11:41278378-41278265 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 304-424
Cow position: chr11:46784654-46784533 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 305-414
Cow position: chr11:30708694-30708586 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 305-417
Cow position: chr11:41213242-41213130 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-411
Cow position: chr11:73983802-73983909 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 9

Conread position: 306-416
Cow position: chr11:83042051-83042161 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 307-406
Cow position: chr11:56311412-56311511 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 309-393
Cow position: chr11:48932403-48932487 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 309-415
Cow position: chr11:36300398-36300501 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 311-406
Cow position: chr11:17859969-17860062 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 311-408
Cow position: chr11:56901880-56901977 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-417
Cow position: chr11:43641572-43641466 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-417
Cow position: chr11:53460882-53460776 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 311-457
Cow position: chr11:40538733-40538588 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 82

Conread position: 312-417
Cow position: chr11:53817038-53816933 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 316-419
Cow position: chr11:8828189-8828086 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 318-417
Cow position: chr11:33345694-33345595 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 327-416
Cow position: chr11:63695671-63695760 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.