Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 257-412
Cow position: chr14:21593215-21593059 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 17

Conread position: 266-419
Cow position: chr14:8027768-8027616 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 134, 35

Conread position: 275-405
Cow position: chr14:11470345-11470214 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 277-416
Cow position: chr14:31130568-31130431 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 280-405
Cow position: chr14:11981272-11981400 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 280-415
Cow position: chr14:7198307-7198441 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 281-406
Cow position: chr14:31342023-31342146 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 281-418
Cow position: chr14:34210804-34210664 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 286-399
Cow position: chr14:27884832-27884945 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 286-415
Cow position: chr14:35421267-35421139 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 17

Conread position: 289-435
Cow position: chr14:23100435-23100578 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 291-402
Cow position: chr14:2003105-2003216 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-401
Cow position: chr14:11285240-11285350 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 292-416
Cow position: chr14:12071704-12071580 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-416
Cow position: chr14:45955111-45955235 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 23

Conread position: 293-387
Cow position: chr14:38411129-38411223 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 293-387
Cow position: chr14:45072301-45072396 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 293-405
Cow position: chr14:13176606-13176494 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr14:13516168-13516056 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr14:24921921-24922033 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 107

Conread position: 293-405
Cow position: chr14:25971839-25971952 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 293-415
Cow position: chr14:33457221-33457099 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr14:18270184-18270305 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 293-416
Cow position: chr14:18412770-18412647 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr14:19924209-19924084 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 293-416
Cow position: chr14:29964843-29964964 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 293-421
Cow position: chr14:36289966-36289837 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 28

Conread position: 294-386
Cow position: chr14:13809779-13809871 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr14:34330996-34330886 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 294-416
Cow position: chr14:12137842-12137961 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 294-416
Cow position: chr14:41755982-41756103 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 294-418
Cow position: chr14:10920743-10920619 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-421
Cow position: chr14:42080092-42079964 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 295-405
Cow position: chr14:25517121-25517011 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-413
Cow position: chr14:6600127-6600008 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 295-416
Cow position: chr14:19988238-19988115 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 295-416
Cow position: chr14:20010682-20010561 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 295-416
Cow position: chr14:40230809-40230691 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 295-417
Cow position: chr14:12081299-12081181 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 295-420
Cow position: chr14:35420936-35420812 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 296-383
Cow position: chr14:35509030-35509118 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 296-405
Cow position: chr14:20016883-20016774 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 296-416
Cow position: chr14:15428306-15428422 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 296-416
Cow position: chr14:26115886-26116006 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 19

Conread position: 297-416
Cow position: chr14:5222457-5222338 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-416
Cow position: chr14:13006352-13006471 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 297-416
Cow position: chr14:39097334-39097451 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 297-416
Cow position: chr14:44713243-44713363 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 297-420
Cow position: chr14:8949476-8949600 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 85

Conread position: 301-405
Cow position: chr14:6389051-6388952 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 302-393
Cow position: chr14:4209290-4209381 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 302-399
Cow position: chr14:28306364-28306461 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 302-415
Cow position: chr14:45076978-45077091 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 302-416
Cow position: chr14:28923998-28924112 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 302-416
Cow position: chr14:30023367-30023253 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 302-416
Cow position: chr14:35381422-35381536 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 302-416
Cow position: chr14:36723240-36723354 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 303-405
Cow position: chr14:15518569-15518467 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 303-406
Cow position: chr14:38296363-38296263 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 303-416
Cow position: chr14:37504346-37504459 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 304-405
Cow position: chr14:13385201-13385302 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 304-413
Cow position: chr14:33229565-33229456 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr14:2975250-2975140 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 304-416
Cow position: chr14:10937506-10937617 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 304-416
Cow position: chr14:27364412-27364524 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 304-422
Cow position: chr14:27044955-27044836 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 103
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 307-404
Cow position: chr14:1708821-1708724 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 307-416
Cow position: chr14:28304949-28304840 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 307-417
Cow position: chr14:25986350-25986460 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 308-416
Cow position: chr14:18941449-18941341 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-416
Cow position: chr14:23419635-23419740 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 312-422
Cow position: chr14:30260593-30260704 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 85

Conread position: 315-411
Cow position: chr14:7386707-7386611 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 324-406
Cow position: chr14:41706568-41706486 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.