Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 260-403
Cow position: chr16:7542536-7542396 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 268-406
Cow position: chr16:56126537-56126672 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 270-390
Cow position: chr16:24751738-24751857 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 270-405
Cow position: chr16:24751978-24752112 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 271-382
Cow position: chr16:9950630-9950741 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 277-416
Cow position: chr16:27004108-27003968 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 16

Conread position: 278-404
Cow position: chr16:42398652-42398781 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 282-387
Cow position: chr16:47578528-47578424 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 284-405
Cow position: chr16:14841590-14841471 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 288-393
Cow position: chr16:12091432-12091533 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 290-416
Cow position: chr16:16232281-16232155 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 291-410
Cow position: chr16:46548042-46548159 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 292-387
Cow position: chr16:52705827-52705921 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 11

Conread position: 292-402
Cow position: chr16:47835135-47835029 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 292-416
Cow position: chr16:12274290-12274167 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 292-416
Cow position: chr16:22984970-22984852 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 292-419
Cow position: chr16:34998401-34998529 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 293-389
Cow position: chr16:9196603-9196700 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 293-405
Cow position: chr16:7665859-7665747 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 98
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr16:17209084-17209197 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 293-406
Cow position: chr16:6343687-6343801 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 293-415
Cow position: chr16:50078537-50078660 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 293-416
Cow position: chr16:2223175-2223298 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr16:19720597-19720720 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr16:21002155-21002276 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 293-416
Cow position: chr16:30368605-30368729 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 293-416
Cow position: chr16:38663488-38663612 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 293-417
Cow position: chr16:27326904-27327027 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 293-417
Cow position: chr16:50442772-50442647 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 293-418
Cow position: chr16:51393169-51393293 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 293-420
Cow position: chr16:50085270-50085400 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 294-403
Cow position: chr16:7583617-7583507 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 294-404
Cow position: chr16:24459270-24459159 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 294-405
Cow position: chr16:9497042-9497157 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 294-405
Cow position: chr16:29038134-29038024 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 294-405
Cow position: chr16:56248714-56248826 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 294-410
Cow position: chr16:44429095-44428982 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 294-414
Cow position: chr16:30054884-30055002 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 294-415
Cow position: chr16:54692995-54692876 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 294-416
Cow position: chr16:5382404-5382282 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 294-420
Cow position: chr16:21044517-21044391 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-393
Cow position: chr16:54084302-54084204 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 295-405
Cow position: chr16:42107846-42107739 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 295-416
Cow position: chr16:42992437-42992315 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 295-419
Cow position: chr16:24674456-24674579 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 295-427
Cow position: chr16:30095754-30095885 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 20

Conread position: 296-400
Cow position: chr16:50409464-50409360 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 296-405
Cow position: chr16:258067-258176 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 296-405
Cow position: chr16:31559120-31559011 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 296-412
Cow position: chr16:41115777-41115893 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 296-416
Cow position: chr16:9097242-9097122 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 296-416
Cow position: chr16:18047935-18048056 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 296-418
Cow position: chr16:11634887-11634765 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 297-417
Cow position: chr16:21442394-21442513 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 301-404
Cow position: chr16:25419040-25419143 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 301-404
Cow position: chr16:36120785-36120884 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 301-416
Cow position: chr16:9729993-9730108 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 27

Conread position: 301-416
Cow position: chr16:18243948-18243833 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 301-416
Cow position: chr16:32301792-32301907 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 10

Conread position: 302-404
Cow position: chr16:44568796-44568898 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 302-405
Cow position: chr16:28233095-28233195 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 302-417
Cow position: chr16:12457874-12457987 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 302-419
Cow position: chr16:9616633-9616750 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 13

Conread position: 303-404
Cow position: chr16:49252357-49252457 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 303-406
Cow position: chr16:10249607-10249710 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-407
Cow position: chr16:12096642-12096746 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-409
Cow position: chr16:52274926-52275030 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 304-403
Cow position: chr16:56595180-56595278 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 304-405
Cow position: chr16:8021581-8021682 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 304-406
Cow position: chr16:20614704-20614602 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-406
Cow position: chr16:24672652-24672754 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-410
Cow position: chr16:4077832-4077940 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 304-415
Cow position: chr16:9615007-9615119 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 304-415
Cow position: chr16:33073678-33073787 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 304-416
Cow position: chr16:33290595-33290483 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr16:56615294-56615406 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-418
Cow position: chr16:44144599-44144487 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 304-418
Cow position: chr16:48567737-48567622 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 305-408
Cow position: chr16:29311735-29311632 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-406
Cow position: chr16:15714318-15714218 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-413
Cow position: chr16:23681567-23681460 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 306-416
Cow position: chr16:44138284-44138394 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 306-420
Cow position: chr16:47633080-47632966 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 307-407
Cow position: chr16:40446473-40446373 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 307-415
Cow position: chr16:15407351-15407459 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 307-416
Cow position: chr16:27051253-27051144 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 308-406
Cow position: chr16:16543056-16542958 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 309-413
Cow position: chr16:12379138-12379243 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 311-393
Cow position: chr16:53614326-53614244 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 311-412
Cow position: chr16:11083197-11083096 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-416
Cow position: chr16:7928181-7928286 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-416
Cow position: chr16:8065684-8065789 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-417
Cow position: chr16:24636009-24636115 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 311-450
Cow position: chr16:26550839-26550979 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 138

Conread position: 312-416
Cow position: chr16:56082162-56082266 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 312-417
Cow position: chr16:32142292-32142187 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 312-417
Cow position: chr16:47303912-47304017 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 312-418
Cow position: chr16:23564338-23564231 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 315-413
Cow position: chr16:40029688-40029785 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 315-416
Cow position: chr16:7441903-7442004 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 315-419
Cow position: chr16:6262652-6262756 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 316-416
Cow position: chr16:35297598-35297500 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 322-412
Cow position: chr16:42539392-42539480 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 324-413
Cow position: chr16:15949320-15949409 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 324-415
Cow position: chr16:31241104-31241195 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.