Cow genome map
| Conread name: | rpigcf0_004212.y1 |
| Conread position: | 260-416 |
| Cow position: | chr17:11618879-11618723 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 268-416 |
| Cow position: | chr17:36814652-36814501 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 280-416 |
| Cow position: | chr17:25467261-25467121 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 282-416 |
| Cow position: | chr17:26072488-26072622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 285-418 |
| Cow position: | chr17:41617004-41616873 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 289-405 |
| Cow position: | chr17:17180308-17180193 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 290-416 |
| Cow position: | chr17:39964138-39964014 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 291-405 |
| Cow position: | chr17:25584505-25584391 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-418 |
| Cow position: | chr17:11920901-11921028 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 292-389 |
| Cow position: | chr17:20789338-20789435 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-402 |
| Cow position: | chr17:7674550-7674660 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-380 |
| Cow position: | chr17:23056694-23056607 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-387 |
| Cow position: | chr17:21959424-21959518 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-387 |
| Cow position: | chr17:38483924-38483830 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-393 |
| Cow position: | chr17:12958153-12958252 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 293-395 |
| Cow position: | chr17:18146453-18146347 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 293-405 |
| Cow position: | chr17:3387978-3387866 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-405 |
| Cow position: | chr17:13940059-13940171 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-405 |
| Cow position: | chr17:21076032-21075920 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-406 |
| Cow position: | chr17:35149269-35149381 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 293-408 |
| Cow position: | chr17:25118146-25118033 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 293-410 |
| Cow position: | chr17:7659338-7659454 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 293-415 |
| Cow position: | chr17:27795915-27795792 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 293-416 |
| Cow position: | chr17:9509733-9509857 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 293-416 |
| Cow position: | chr17:21236784-21236661 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-416 |
| Cow position: | chr17:23531426-23531304 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 293-417 |
| Cow position: | chr17:4271100-4271224 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-418 |
| Cow position: | chr17:6787197-6787074 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 293-421 |
| Cow position: | chr17:31736242-31736372 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 294-389 |
| Cow position: | chr17:6761596-6761691 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-403 |
| Cow position: | chr17:25875654-25875546 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 294-412 |
| Cow position: | chr17:26231222-26231104 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 294-413 |
| Cow position: | chr17:21718737-21718858 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 294-416 |
| Cow position: | chr17:44797937-44797815 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-417 |
| Cow position: | chr17:42744749-42744628 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 295-404 |
| Cow position: | chr17:12946103-12946213 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 295-405 |
| Cow position: | chr17:3517461-3517568 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 295-405 |
| Cow position: | chr17:20929501-20929391 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-416 |
| Cow position: | chr17:952410-952290 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 295-416 |
| Cow position: | chr17:32027190-32027313 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 296-404 |
| Cow position: | chr17:39904732-39904624 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-416 |
| Cow position: | chr17:10221951-10222071 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 297-416 |
| Cow position: | chr17:18673782-18673901 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-416 |
| Cow position: | chr17:21181708-21181590 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-416 |
| Cow position: | chr17:26225282-26225166 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 303-405 |
| Cow position: | chr17:27258676-27258574 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-413 |
| Cow position: | chr17:31480782-31480891 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 304-416 |
| Cow position: | chr17:7802924-7803036 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-416 |
| Cow position: | chr17:40673621-40673509 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-417 |
| Cow position: | chr17:15883923-15883810 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-422 |
| Cow position: | chr17:19471525-19471641 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 306-416 |
| Cow position: | chr17:40355507-40355397 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-417 |
| Cow position: | chr17:1081454-1081343 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-393 |
| Cow position: | chr17:25718388-25718302 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-411 |
| Cow position: | chr17:11055922-11056026 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-416 |
| Cow position: | chr17:6270012-6269904 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 307-416 |
| Cow position: | chr17:10037655-10037546 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-406 |
| Cow position: | chr17:24841938-24841844 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 315-416 |
| Cow position: | chr17:7571343-7571242 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.