Cow genome map
| Conread name: | rpigcf0_004212.y1 |
| Conread position: | 278-420 |
| Cow position: | chr22:5282740-5282601 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 280-404 |
| Cow position: | chr22:32698985-32698867 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 284-420 |
| Cow position: | chr22:8883234-8883098 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-416 |
| Cow position: | chr22:18403469-18403340 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 286-416 |
| Cow position: | chr22:30607081-30606951 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-416 |
| Cow position: | chr22:15490875-15490749 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 287-426 |
| Cow position: | chr22:18301820-18301958 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 289-409 |
| Cow position: | chr22:33373461-33373344 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 289-413 |
| Cow position: | chr22:10371858-10371738 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 291-416 |
| Cow position: | chr22:11790206-11790078 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 292-401 |
| Cow position: | chr22:18099835-18099726 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-404 |
| Cow position: | chr22:33447862-33447974 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-414 |
| Cow position: | chr22:39446510-39446388 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-414 |
| Cow position: | chr22:47820654-47820534 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 292-415 |
| Cow position: | chr22:3061167-3061044 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-416 |
| Cow position: | chr22:24557308-24557432 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-419 |
| Cow position: | chr22:670918-671045 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-387 |
| Cow position: | chr22:14142909-14143003 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-403 |
| Cow position: | chr22:6754049-6754158 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 293-403 |
| Cow position: | chr22:27577959-27577850 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 293-404 |
| Cow position: | chr22:14488152-14488042 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 293-405 |
| Cow position: | chr22:2135774-2135665 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 293-406 |
| Cow position: | chr22:12637817-12637705 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 293-415 |
| Cow position: | chr22:9075627-9075503 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 293-416 |
| Cow position: | chr22:11696980-11697100 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 293-416 |
| Cow position: | chr22:17107768-17107646 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 293-416 |
| Cow position: | chr22:25312728-25312604 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 293-416 |
| Cow position: | chr22:27681940-27681816 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 293-416 |
| Cow position: | chr22:30176935-30176812 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-417 |
| Cow position: | chr22:1045973-1046097 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-404 |
| Cow position: | chr22:19413820-19413930 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-405 |
| Cow position: | chr22:39471941-39472052 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-406 |
| Cow position: | chr22:19306115-19306003 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-416 |
| Cow position: | chr22:22860697-22860817 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 294-417 |
| Cow position: | chr22:35215766-35215642 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 295-397 |
| Cow position: | chr22:3486552-3486652 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 295-404 |
| Cow position: | chr22:4533656-4533765 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-406 |
| Cow position: | chr22:7496895-7497005 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 295-410 |
| Cow position: | chr22:23630143-23630257 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 295-416 |
| Cow position: | chr22:30293903-30293782 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-417 |
| Cow position: | chr22:6289287-6289408 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 295-420 |
| Cow position: | chr22:45801073-45800948 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-416 |
| Cow position: | chr22:1973606-1973726 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-416 |
| Cow position: | chr22:43130928-43131049 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 296-417 |
| Cow position: | chr22:24542579-24542455 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 297-405 |
| Cow position: | chr22:1953366-1953259 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 297-415 |
| Cow position: | chr22:14641645-14641763 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-416 |
| Cow position: | chr22:12929067-12929186 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-416 |
| Cow position: | chr22:27275676-27275557 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-404 |
| Cow position: | chr22:8733135-8733242 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 298-406 |
| Cow position: | chr22:44018042-44018150 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-416 |
| Cow position: | chr22:14600123-14600241 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-417 |
| Cow position: | chr22:3430405-3430284 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 301-383 |
| Cow position: | chr22:29345794-29345712 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 76 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-412 |
| Cow position: | chr22:28634374-28634485 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-416 |
| Cow position: | chr22:35627559-35627442 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 301-417 |
| Cow position: | chr22:1065314-1065198 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-405 |
| Cow position: | chr22:5837467-5837364 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-405 |
| Cow position: | chr22:23386503-23386606 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-407 |
| Cow position: | chr22:9372732-9372627 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-404 |
| Cow position: | chr22:28732456-28732355 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-417 |
| Cow position: | chr22:16797628-16797742 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-418 |
| Cow position: | chr22:11836869-11836984 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-410 |
| Cow position: | chr22:12195356-12195462 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-416 |
| Cow position: | chr22:4736230-4736118 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-416 |
| Cow position: | chr22:11211489-11211601 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-416 |
| Cow position: | chr22:35665668-35665780 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-417 |
| Cow position: | chr22:7414844-7414959 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 304-417 |
| Cow position: | chr22:43131350-43131464 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 307-412 |
| Cow position: | chr22:24595772-24595878 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 307-415 |
| Cow position: | chr22:16541448-16541556 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-417 |
| Cow position: | chr22:29219701-29219811 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-406 |
| Cow position: | chr22:26112564-26112469 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-417 |
| Cow position: | chr22:35578579-35578685 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-414 |
| Cow position: | chr22:6610162-6610264 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-406 |
| Cow position: | chr22:13866861-13866770 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 78 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-412 |
| Cow position: | chr22:3540928-3541023 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 318-405 |
| Cow position: | chr22:12389292-12389205 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.