Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 268-416
Cow position: chr28:13356122-13356268 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 14

Conread position: 276-417
Cow position: chr28:6358167-6358311 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 89

Conread position: 278-417
Cow position: chr28:4307655-4307794 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 279-418
Cow position: chr28:14934234-14934099 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 292-405
Cow position: chr28:18761784-18761896 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 292-416
Cow position: chr28:6124036-6124159 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 292-416
Cow position: chr28:6563670-6563794 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 292-416
Cow position: chr28:7644964-7644844 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 293-389
Cow position: chr28:10528735-10528831 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-401
Cow position: chr28:22278806-22278915 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 293-404
Cow position: chr28:751456-751340 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 293-404
Cow position: chr28:3484807-3484698 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 293-404
Cow position: chr28:6301307-6301196 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr28:13245787-13245675 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-414
Cow position: chr28:11059712-11059593 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 293-414
Cow position: chr28:14242919-14242799 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 293-414
Cow position: chr28:16159647-16159768 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr28:4163357-4163480 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr28:4937017-4937139 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 293-416
Cow position: chr28:7697756-7697879 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr28:11866445-11866562 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 293-416
Cow position: chr28:19127948-19128072 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 293-416
Cow position: chr28:21118903-21118780 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr28:32015008-32014887 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 293-417
Cow position: chr28:2892479-2892355 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 293-417
Cow position: chr28:8827387-8827263 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr28:117536-117647 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 294-404
Cow position: chr28:118836-118725 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 294-416
Cow position: chr28:8347956-8347834 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-406
Cow position: chr28:11398574-11398684 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 295-416
Cow position: chr28:17620137-17620259 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 295-417
Cow position: chr28:27941561-27941681 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 296-412
Cow position: chr28:18791253-18791141 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 296-416
Cow position: chr28:10495080-10495198 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 296-416
Cow position: chr28:16200520-16200640 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 298-416
Cow position: chr28:6283272-6283388 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 299-393
Cow position: chr28:4873107-4873201 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 301-403
Cow position: chr28:5630314-5630212 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 301-409
Cow position: chr28:3449524-3449416 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 302-416
Cow position: chr28:11562029-11562143 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 304-405
Cow position: chr28:3311008-3311110 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 304-405
Cow position: chr28:17737938-17738039 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-417
Cow position: chr28:26304278-26304166 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 304-421
Cow position: chr28:32203336-32203221 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 305-407
Cow position: chr28:5436875-5436975 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 307-405
Cow position: chr28:3011058-3011156 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 309-415
Cow position: chr28:10252708-10252814 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 311-405
Cow position: chr28:4282284-4282378 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-405
Cow position: chr28:5232145-5232049 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 311-416
Cow position: chr28:8165008-8165113 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 311-416
Cow position: chr28:16964759-16964864 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 311-417
Cow position: chr28:19024655-19024546 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 315-410
Cow position: chr28:8716179-8716274 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 318-406
Cow position: chr28:27721894-27721806 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.